RNA–Protein interactions for RNA: ENST00000582242.1

CDH8-207, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-207ENST00000582242 RNF185Q96GF1 192 aa6.03□□□□□ -1.44
CDH8-207ENST00000582242 CCL19Q99731 98 aa6.03□□□□□ -1.44
CDH8-207ENST00000582242 AGPAT4-IT1Q9H0P7 198 aa6.03□□□□□ -1.44
CDH8-207ENST00000582242 AKAP13Q12802 2813 aa6.03□□□□□ -1.44
CDH8-207ENST00000582242 RIF1Q5UIP0 2472 aaKnown RBP6.03□□□□□ -1.44
CDH8-207ENST00000582242 TRAV8-2A0A0B4J237 113 aa6.02□□□□□ -1.45
CDH8-207ENST00000582242 TRAV21A0A0B4J279 112 aa6.02□□□□□ -1.45
CDH8-207ENST00000582242 IGHV3-35A0A0C4DH35 117 aa6.02□□□□□ -1.45
CDH8-207ENST00000582242 A0A0G2JLM5 398 aa6.02□□□□□ -1.45
CDH8-207ENST00000582242 A6NDN8 102 aa6.02□□□□□ -1.45
CDH8-207ENST00000582242 K7EMI3 77 aa6.02□□□□□ -1.45
CDH8-207ENST00000582242 NCR2O95944 276 aa6.02□□□□□ -1.45
CDH8-207ENST00000582242 IGHG2P01859 326 aa6.02□□□□□ -1.45
CDH8-207ENST00000582242 HLA-DRB4P13762 266 aa6.02□□□□□ -1.45
CDH8-207ENST00000582242 HSD52Q0P140 79 aa6.02□□□□□ -1.45
CDH8-207ENST00000582242 SPANXN1Q5VSR9 72 aa6.02□□□□□ -1.45
CDH8-207ENST00000582242 REG3GQ6UW15 175 aa6.02□□□□□ -1.45
CDH8-207ENST00000582242 RNF182Q8N6D2 247 aa6.02□□□□□ -1.45
CDH8-207ENST00000582242 PEF1Q9UBV8 284 aaKnown RBP6.02□□□□□ -1.45
CDH8-207ENST00000582242 CBY1Q9Y3M2 126 aa6.02□□□□□ -1.45
CDH8-207ENST00000582242 HLA-DRB4X5D2U9 266 aa6.02□□□□□ -1.45
CDH8-207ENST00000582242 LOC400499M0QZD8 3231 aa6.02□□□□□ -1.45
CDH8-207ENST00000582242 ARHGAP32A7KAX9 2087 aa6.02□□□□□ -1.45
CDH8-207ENST00000582242 ZFHX2Q9C0A1 2572 aaPredicted RBP6.01□□□□□ -1.45
CDH8-207ENST00000582242 IGHV3OR16-8A0A075B7F1 116 aa6.01□□□□□ -1.45
CDH8-207ENST00000582242 TRAV40A0A0B4J280 105 aa6.01□□□□□ -1.45
CDH8-207ENST00000582242 SMKR1H3BMG3 65 aa6.01□□□□□ -1.45
CDH8-207ENST00000582242 PPP1R17O96001 155 aa6.01□□□□□ -1.45
CDH8-207ENST00000582242 VAMP3Q15836 100 aa6.01□□□□□ -1.45
CDH8-207ENST00000582242 TMEM97Q5BJF2 176 aa6.01□□□□□ -1.45
CDH8-207ENST00000582242 BOD1L2Q8IYS8 172 aa6.01□□□□□ -1.45
CDH8-207ENST00000582242 MAPK1IP1LQ8NDC0 245 aa6.01□□□□□ -1.45
CDH8-207ENST00000582242 OR4C5Q8NGB2 326 aa6.01□□□□□ -1.45
CDH8-207ENST00000582242 OR2K2Q8NGT1 345 aa6.01□□□□□ -1.45
CDH8-207ENST00000582242 C10orf105Q8TEF2 133 aa6.01□□□□□ -1.45
CDH8-207ENST00000582242 C9orf85Q96MD7 179 aa6.01□□□□□ -1.45
CDH8-207ENST00000582242 IGKV3D-20A0A0C4DH25 116 aa6□□□□□ -1.45
CDH8-207ENST00000582242 IGHV3-66A0A0C4DH42 116 aa6□□□□□ -1.45
CDH8-207ENST00000582242 MUC21A0A0G2JKD1 596 aa6□□□□□ -1.45
CDH8-207ENST00000582242 IGHV7-4-1A0A0J9YVY3 117 aa6□□□□□ -1.45
CDH8-207ENST00000582242 MUC21A0A140T8X8 626 aa6□□□□□ -1.45
CDH8-207ENST00000582242 A6NDX4 124 aa6□□□□□ -1.45
CDH8-207ENST00000582242 LINC01549A6NIU2 74 aa6□□□□□ -1.45
CDH8-207ENST00000582242 TAX1BP3O14907 124 aa6□□□□□ -1.45
CDH8-207ENST00000582242 SLC25A16P16260 332 aa6□□□□□ -1.45
CDH8-207ENST00000582242 LEPP41159 167 aa6□□□□□ -1.45
CDH8-207ENST00000582242 ASIPP42127 132 aa6□□□□□ -1.45
CDH8-207ENST00000582242 LOXL1Q08397 574 aaPredicted RBP6□□□□□ -1.45
CDH8-207ENST00000582242 LAGE3Q14657 143 aa6□□□□□ -1.45
CDH8-207ENST00000582242 C2orf91Q6ZV80 131 aa6□□□□□ -1.45
CDH8-207ENST00000582242 RASL10AQ92737 203 aa6□□□□□ -1.45
CDH8-207ENST00000582242 AP1S3Q96PC3 154 aa6□□□□□ -1.45
CDH8-207ENST00000582242 UFC1Q9Y3C8 167 aa6□□□□□ -1.45
CDH8-207ENST00000582242 PTPRZ1P23471 2315 aaPredicted RBP6□□□□□ -1.45
CDH8-207ENST00000582242 MAP1BP46821 2468 aaKnown RBP6□□□□□ -1.45
CDH8-207ENST00000582242 DMXL1Q9Y485 3027 aa5.99□□□□□ -1.45
CDH8-207ENST00000582242 M0R381 172 aa5.99□□□□□ -1.45
CDH8-207ENST00000582242 ZNF207O43670 478 aaKnown RBP5.99□□□□□ -1.45
CDH8-207ENST00000582242 DPM2O94777 84 aa5.99□□□□□ -1.45
CDH8-207ENST00000582242 MSMBP08118 114 aa5.99□□□□□ -1.45
CDH8-207ENST00000582242 FGF6P10767 208 aa5.99□□□□□ -1.45
CDH8-207ENST00000582242 ORMDL2Q53FV1 153 aa5.99□□□□□ -1.45
CDH8-207ENST00000582242 MYOZ3Q8TDC0 251 aa5.99□□□□□ -1.45
CDH8-207ENST00000582242 C20orf78Q9BR46 151 aa5.99□□□□□ -1.45
CDH8-207ENST00000582242 DPH3P1Q9H4G8 78 aa5.99□□□□□ -1.45
CDH8-207ENST00000582242 HIGD1BQ9P298 99 aa5.99□□□□□ -1.45
CDH8-207ENST00000582242 IGLV2-18A0A075B6J9 118 aa5.98□□□□□ -1.45
CDH8-207ENST00000582242 IGHV3-49A0A0A0MS15 119 aa5.98□□□□□ -1.45
CDH8-207ENST00000582242 H3BRM9 83 aa5.98□□□□□ -1.45
CDH8-207ENST00000582242 H3BUX3 64 aa5.98□□□□□ -1.45
CDH8-207ENST00000582242 C19orf84I3L1E1 186 aa5.98□□□□□ -1.45
CDH8-207ENST00000582242 K7EMT4 169 aa5.98□□□□□ -1.45
CDH8-207ENST00000582242 K7EP13 123 aa5.98□□□□□ -1.45
CDH8-207ENST00000582242 CCL25O15444 150 aa5.98□□□□□ -1.45
CDH8-207ENST00000582242 IGKCP01834 107 aa5.98□□□□□ -1.45
CDH8-207ENST00000582242 PRB4P10163 310 aaPredicted RBP5.98□□□□□ -1.45
CDH8-207ENST00000582242 EVI2AP22794 236 aa5.98□□□□□ -1.45
CDH8-207ENST00000582242 S100A4P26447 101 aaKnown RBP5.98□□□□□ -1.45
CDH8-207ENST00000582242 PLNP26678 52 aa5.98□□□□□ -1.45
CDH8-207ENST00000582242 UQCRFS1P47985 274 aa5.98□□□□□ -1.45
CDH8-207ENST00000582242 ATP5J2P56134 94 aa5.98□□□□□ -1.45
CDH8-207ENST00000582242 GTF2H5Q6ZYL4 71 aa5.98□□□□□ -1.45
CDH8-207ENST00000582242 APRG1Q8IVJ8 170 aa5.98□□□□□ -1.45
CDH8-207ENST00000582242 TMEM158Q8WZ71 300 aa5.98□□□□□ -1.45
CDH8-207ENST00000582242 SMIM2Q9BVW6 85 aa5.98□□□□□ -1.45
CDH8-207ENST00000582242 SPENQ96T58 3664 aaKnown RBP5.98□□□□□ -1.45
CDH8-207ENST00000582242 IGHV3OR16-13A0A075B7E8 117 aa5.97□□□□□ -1.45
CDH8-207ENST00000582242 IGHV3-74A0A0B4J1X5 117 aa5.97□□□□□ -1.45
CDH8-207ENST00000582242 TRAV12-1A0A0B4J245 112 aa5.97□□□□□ -1.45
CDH8-207ENST00000582242 C7orf71A4D174 169 aa5.97□□□□□ -1.45
CDH8-207ENST00000582242 B4DSR2 109 aa5.97□□□□□ -1.45
CDH8-207ENST00000582242 H3BVH4 76 aa5.97□□□□□ -1.45
CDH8-207ENST00000582242 NMUP48645 174 aa5.97□□□□□ -1.45
CDH8-207ENST00000582242 ZFAND2AQ8N6M9 145 aa5.97□□□□□ -1.45
CDH8-207ENST00000582242 C18orf15Q96N68 181 aa5.97□□□□□ -1.45
CDH8-207ENST00000582242 FOXC2Q99958 501 aa5.97□□□□□ -1.45
CDH8-207ENST00000582242 DAZ1Q9NQZ3 744 aaKnown RBP5.97□□□□□ -1.45
CDH8-207ENST00000582242 PHLDA3Q9Y5J5 127 aa5.97□□□□□ -1.45
CDH8-207ENST00000582242 MGAQ8IWI9 3026 aa5.96□□□□□ -1.45
CDH8-207ENST00000582242 TLN1Q9Y490 2541 aaKnown RBP5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms