RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 SONP18583 2426 aaKnown RBP2.49□□□□□ -2.01
NF1-220ENST00000581113 IGKV1D-42A0A075B6H8 117 aa2.49□□□□□ -2.01
NF1-220ENST00000581113 IGHV3-43A0A0B4J1X8 118 aa2.49□□□□□ -2.01
NF1-220ENST00000581113 TRAV13-1A0A0B4J241 112 aa2.49□□□□□ -2.01
NF1-220ENST00000581113 IGHV1-58A0A0C4DH39 117 aa2.49□□□□□ -2.01
NF1-220ENST00000581113 A0A1B0GWA3 101 aa2.49□□□□□ -2.01
NF1-220ENST00000581113 BBIP1A8MTZ0 92 aa2.49□□□□□ -2.01
NF1-220ENST00000581113 A8MWL6 223 aa2.49□□□□□ -2.01
NF1-220ENST00000581113 H3BMG7 143 aa2.49□□□□□ -2.01
NF1-220ENST00000581113 RPL36A-HNRNPH2H7BZ11 118 aa2.49□□□□□ -2.01
NF1-220ENST00000581113 LEPROTO15243 131 aa2.49□□□□□ -2.01
NF1-220ENST00000581113 LY6HO94772 140 aa2.49□□□□□ -2.01
NF1-220ENST00000581113 IGKV1-16P04430 117 aa2.49□□□□□ -2.01
NF1-220ENST00000581113 CRHBPP24387 322 aa2.49□□□□□ -2.01
NF1-220ENST00000581113 S100A4P26447 101 aaKnown RBP2.49□□□□□ -2.01
NF1-220ENST00000581113 GUCA1AP43080 201 aaPredicted RBP2.49□□□□□ -2.01
NF1-220ENST00000581113 GNG4P50150 75 aa2.49□□□□□ -2.01
NF1-220ENST00000581113 CDK6Q00534 326 aa2.49□□□□□ -2.01
NF1-220ENST00000581113 MEF2BQ02080 365 aaPredicted RBP2.49□□□□□ -2.01
NF1-220ENST00000581113 RPL22L1Q6P5R6 122 aaKnown RBP2.49□□□□□ -2.01
NF1-220ENST00000581113 AMTNQ6UX39 209 aa2.49□□□□□ -2.01
NF1-220ENST00000581113 NTM-AS1Q6ZSK4 140 aa2.49□□□□□ -2.01
NF1-220ENST00000581113 C10orf111Q8N326 155 aa2.49□□□□□ -2.01
NF1-220ENST00000581113 OR4C12Q96R67 309 aa2.49□□□□□ -2.01
NF1-220ENST00000581113 TMEM133Q9H2Q1 129 aa2.49□□□□□ -2.01
NF1-220ENST00000581113 EPDR1Q9UM22 224 aa2.49□□□□□ -2.01
NF1-220ENST00000581113 ATRQ13535 2644 aa2.49□□□□□ -2.01
NF1-220ENST00000581113 TRBV7-6A0A0J9YX20 115 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 SPRR5A0A1B0GTR4 108 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 MDFIC2A0A1B0GVS7 189 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 C7orf71A4D174 169 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 ZNF727A8MUV8 499 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 A8MWP4 228 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 IGKV1D-33P01593 117 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 IGKV1-33P01594 117 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 OR5AC1P0C628 307 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 IGHV1-8P0DP01 117 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 SRP14P37108 136 aaKnown RBP2.48□□□□□ -2.01
NF1-220ENST00000581113 DYNLT3P51808 116 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 AQP4P55087 323 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 NDUFA6P56556 154 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 TSPEAR-AS2P59090 65 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 UBE2BP63146 152 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 HBBP68871 147 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 SYCNQ0VAF6 134 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 LY6EQ16553 131 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 MRPL51Q4U2R6 128 aaKnown RBP2.48□□□□□ -2.01
NF1-220ENST00000581113 HSD17B12Q53GQ0 312 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 LCN15Q6UWW0 184 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 KRTAP5-2Q701N4 177 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 AMN1Q8IY45 258 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 ZNF101Q8IZC7 436 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 C9orf62Q8N4C0 152 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 C15orf56Q8N910 161 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 OR4S1Q8NGB4 309 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 CIB3Q96Q77 187 aaPredicted RBP2.48□□□□□ -2.01
NF1-220ENST00000581113 WFDC6Q9BQY6 131 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 CCDC167Q9P0B6 97 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 ABCA1O95477 2261 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 FBN1P35555 2871 aaKnown RBP2.48□□□□□ -2.01
NF1-220ENST00000581113 ALPK2Q86TB3 2170 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 COL6A5A8TX70 2615 aa2.48□□□□□ -2.01
NF1-220ENST00000581113 PLCE1Q9P212 2302 aa2.47□□□□□ -2.01
NF1-220ENST00000581113 IGHV3OR15-7A0A075B7D8 119 aa2.47□□□□□ -2.01
NF1-220ENST00000581113 IRGMA1A4Y4 181 aa2.47□□□□□ -2.01
NF1-220ENST00000581113 CPSF4LA6NMK7 179 aaKnown RBP2.47□□□□□ -2.01
NF1-220ENST00000581113 IFITM5A6NNB3 132 aa2.47□□□□□ -2.01
NF1-220ENST00000581113 A8MWP6 167 aa2.47□□□□□ -2.01
NF1-220ENST00000581113 UBL3O95164 117 aa2.47□□□□□ -2.01
NF1-220ENST00000581113 GZMBP10144 247 aa2.47□□□□□ -2.01
NF1-220ENST00000581113 ZNF14P17017 642 aaPredicted RBP2.47□□□□□ -2.01
NF1-220ENST00000581113 KRTAP10-1P60331 282 aa2.47□□□□□ -2.01
NF1-220ENST00000581113 EIF5AP63241 154 aaKnown RBP2.47□□□□□ -2.01
NF1-220ENST00000581113 GTF2H5Q6ZYL4 71 aa2.47□□□□□ -2.01
NF1-220ENST00000581113 OR5A2Q8NGI9 324 aa2.47□□□□□ -2.01
NF1-220ENST00000581113 BPESC1Q9GZL8 116 aa2.47□□□□□ -2.01
NF1-220ENST00000581113 DYNLRB1Q9NP97 96 aa2.47□□□□□ -2.01
NF1-220ENST00000581113 SLC39A9Q9NUM3 307 aa2.47□□□□□ -2.01
NF1-220ENST00000581113 STAB1Q9NY15 2570 aa2.47□□□□□ -2.01
NF1-220ENST00000581113 FBN3Q75N90 2809 aa2.47□□□□□ -2.01
NF1-220ENST00000581113 CUBNO60494 3623 aa2.47□□□□□ -2.01
NF1-220ENST00000581113 CR1P17927 2039 aa2.47□□□□□ -2.01
NF1-220ENST00000581113 CHD3Q12873 2000 aaKnown RBP2.47□□□□□ -2.01
NF1-220ENST00000581113 TRAV27A0A087WT01 109 aa2.46□□□□□ -2.02
NF1-220ENST00000581113 A0A0G2JND7 137 aa2.46□□□□□ -2.02
NF1-220ENST00000581113 A8MWV9 139 aa2.46□□□□□ -2.02
NF1-220ENST00000581113 LYNX1G3V0Z9 82 aa2.46□□□□□ -2.02
NF1-220ENST00000581113 K7ERS5 55 aa2.46□□□□□ -2.02
NF1-220ENST00000581113 M0R233 179 aa2.46□□□□□ -2.02
NF1-220ENST00000581113 BPY2O14599 106 aa2.46□□□□□ -2.02
NF1-220ENST00000581113 EDF1O60869 148 aaKnown RBP2.46□□□□□ -2.02
NF1-220ENST00000581113 HRASP01112 189 aa2.46□□□□□ -2.02
NF1-220ENST00000581113 KRASP01116 189 aa2.46□□□□□ -2.02
NF1-220ENST00000581113 SLC25A5P05141 298 aaKnown RBP2.46□□□□□ -2.02
NF1-220ENST00000581113 ASAH2BP0C7U1 165 aa2.46□□□□□ -2.02
NF1-220ENST00000581113 LYNX1P0DP58 116 aa2.46□□□□□ -2.02
NF1-220ENST00000581113 HIST1H1BP16401 226 aaKnown RBP2.46□□□□□ -2.02
NF1-220ENST00000581113 RNASE4P34096 147 aaKnown RBP2.46□□□□□ -2.02
NF1-220ENST00000581113 NUDT2P50583 147 aa2.46□□□□□ -2.02
NF1-220ENST00000581113 KRTAP10-10P60014 251 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms