RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 FXYD2P54710 66 aa7.88□□□□□ -1.15
TOP3A-209ENST00000580095 USMG5Q96IX5 58 aa7.88□□□□□ -1.15
TOP3A-209ENST00000580095 AP1S3Q96PC3 154 aa7.88□□□□□ -1.15
TOP3A-209ENST00000580095 SPAG8Q99932 426 aaPredicted RBP7.88□□□□□ -1.15
TOP3A-209ENST00000580095 SPANXB1Q9NS25 103 aaPredicted RBP7.88□□□□□ -1.15
TOP3A-209ENST00000580095 ZNF469Q96JG9 3925 aaPredicted RBP7.88□□□□□ -1.15
TOP3A-209ENST00000580095 SEC11AP67812 179 aa7.88□□□□□ -1.15
TOP3A-209ENST00000580095 SMIM2Q9BVW6 85 aa7.88□□□□□ -1.15
TOP3A-209ENST00000580095 CHD6Q8TD26 2715 aa7.87□□□□□ -1.15
TOP3A-209ENST00000580095 A0A1W2PPM0 123 aa7.87□□□□□ -1.15
TOP3A-209ENST00000580095 OVOL1O14753 267 aa7.87□□□□□ -1.15
TOP3A-209ENST00000580095 TGFAP01135 160 aa7.87□□□□□ -1.15
TOP3A-209ENST00000580095 IGLV1-40P01703 118 aa7.87□□□□□ -1.15
TOP3A-209ENST00000580095 EMP1P54849 157 aa7.87□□□□□ -1.15
TOP3A-209ENST00000580095 VPREB3Q9UKI3 123 aa7.87□□□□□ -1.15
TOP3A-209ENST00000580095 LINC01546A6NGU7 62 aa7.87□□□□□ -1.15
TOP3A-209ENST00000580095 B4DSR2 109 aa7.87□□□□□ -1.15
TOP3A-209ENST00000580095 SUMO2P61956 95 aaKnown RBP7.87□□□□□ -1.15
TOP3A-209ENST00000580095 SRSF1Q07955 248 aaKnown RBP eCLIP7.87□□□□□ -1.153e-7■■■□□ 17.9
TOP3A-209ENST00000580095 PSMG4Q5JS54 123 aa7.87□□□□□ -1.15
TOP3A-209ENST00000580095 RAX2Q96IS3 184 aa7.87□□□□□ -1.15
TOP3A-209ENST00000580095 ZMAT4Q9H898 229 aa7.87□□□□□ -1.15
TOP3A-209ENST00000580095 TRBV25-1A0A075B6N4 114 aa7.86□□□□□ -1.15
TOP3A-209ENST00000580095 FAM74A4Q5TZK3 123 aa7.86□□□□□ -1.15
TOP3A-209ENST00000580095 SCGB3A1Q96QR1 104 aa7.86□□□□□ -1.15
TOP3A-209ENST00000580095 IGHV4-4A0A075B6R2 117 aa7.86□□□□□ -1.15
TOP3A-209ENST00000580095 SYNJ2BPP57105 145 aa7.86□□□□□ -1.15
TOP3A-209ENST00000580095 OR9G4Q8NGQ1 327 aa7.86□□□□□ -1.15
TOP3A-209ENST00000580095 CHAC1Q9BUX1 264 aa7.86□□□□□ -1.15
TOP3A-209ENST00000580095 PPDPFQ9H3Y8 114 aa7.86□□□□□ -1.15
TOP3A-209ENST00000580095 F5H697 171 aa7.85□□□□□ -1.15
TOP3A-209ENST00000580095 CD7P09564 240 aa7.85□□□□□ -1.15
TOP3A-209ENST00000580095 DPH3P1Q9H4G8 78 aa7.85□□□□□ -1.15
TOP3A-209ENST00000580095 A6NDN8 102 aa7.85□□□□□ -1.15
TOP3A-209ENST00000580095 ATP5LO75964 103 aa7.85□□□□□ -1.15
TOP3A-209ENST00000580095 HTN1P15515 57 aa7.85□□□□□ -1.15
TOP3A-209ENST00000580095 C1QTNF4Q9BXJ3 329 aa7.85□□□□□ -1.15
TOP3A-209ENST00000580095 RNF223E7ERA6 249 aa7.85□□□□□ -1.15
TOP3A-209ENST00000580095 MT-ATP8P03928 68 aa7.85□□□□□ -1.15
TOP3A-209ENST00000580095 INSL3P51460 131 aa7.85□□□□□ -1.15
TOP3A-209ENST00000580095 DCANP1Q8TF63 244 aa7.85□□□□□ -1.15
TOP3A-209ENST00000580095 PRM2P04554 102 aa7.84□□□□□ -1.15
TOP3A-209ENST00000580095 SPINK8P0C7L1 97 aa7.84□□□□□ -1.15
TOP3A-209ENST00000580095 CFHR3Q02985 330 aa7.84□□□□□ -1.15
TOP3A-209ENST00000580095 DEFB136Q30KP8 78 aa7.84□□□□□ -1.15
TOP3A-209ENST00000580095 FAM159AQ6UWV7 190 aa7.84□□□□□ -1.15
TOP3A-209ENST00000580095 ANAPC13Q9BS18 74 aa7.84□□□□□ -1.15
TOP3A-209ENST00000580095 BEX4Q9NWD9 120 aaPredicted RBP7.84□□□□□ -1.15
TOP3A-209ENST00000580095 NHP2Q9NX24 153 aaKnown RBP7.84□□□□□ -1.15
TOP3A-209ENST00000580095 MDFICQ9P1T7 246 aa7.84□□□□□ -1.15
TOP3A-209ENST00000580095 LENEPQ9Y5L5 61 aa7.84□□□□□ -1.15
TOP3A-209ENST00000580095 MTORP42345 2549 aa7.84□□□□□ -1.15
TOP3A-209ENST00000580095 A0A087WX48 190 aa7.84□□□□□ -1.15
TOP3A-209ENST00000580095 J3QR89 54 aa7.84□□□□□ -1.15
TOP3A-209ENST00000580095 PSMB8P28062 276 aa7.84□□□□□ -1.15
TOP3A-209ENST00000580095 C2orf66Q6UXQ4 117 aa7.84□□□□□ -1.15
TOP3A-209ENST00000580095 FAM19A4Q96LR4 140 aa7.84□□□□□ -1.15
TOP3A-209ENST00000580095 CDIP1Q9H305 208 aa7.84□□□□□ -1.15
TOP3A-209ENST00000580095 ACANP16112 2415 aa7.84□□□□□ -1.16
TOP3A-209ENST00000580095 APCP25054 2843 aa7.83□□□□□ -1.16
TOP3A-209ENST00000580095 RPL39P62891 51 aaKnown RBP7.83□□□□□ -1.16
TOP3A-209ENST00000580095 WFDC2Q14508 124 aa7.83□□□□□ -1.16
TOP3A-209ENST00000580095 SPINK13Q1W4C9 94 aa7.83□□□□□ -1.16
TOP3A-209ENST00000580095 C18orf65Q6ZTR6 163 aa7.83□□□□□ -1.16
TOP3A-209ENST00000580095 DUX3Q96PT4 197 aa7.83□□□□□ -1.16
TOP3A-209ENST00000580095 JMJD1CQ15652 2540 aa7.83□□□□□ -1.16
TOP3A-209ENST00000580095 C2CD3Q4AC94 2353 aa7.83□□□□□ -1.16
TOP3A-209ENST00000580095 NBPF19A0A087WUL8 3843 aa7.83□□□□□ -1.16
TOP3A-209ENST00000580095 DUSP14O95147 198 aaKnown RBP7.83□□□□□ -1.16
TOP3A-209ENST00000580095 NHLRC4P0CG21 123 aaPredicted RBP7.83□□□□□ -1.16
TOP3A-209ENST00000580095 KRTAP10-9P60411 292 aa7.83□□□□□ -1.16
TOP3A-209ENST00000580095 SH2D6Q7Z4S9 175 aa7.83□□□□□ -1.16
TOP3A-209ENST00000580095 C20orf78Q9BR46 151 aa7.83□□□□□ -1.16
TOP3A-209ENST00000580095 TM2D2Q9BX73 214 aa7.83□□□□□ -1.16
TOP3A-209ENST00000580095 TRAV25A0A0B4J276 109 aa7.82□□□□□ -1.16
TOP3A-209ENST00000580095 H3BUA1 57 aa7.82□□□□□ -1.16
TOP3A-209ENST00000580095 UBR5O95071 2799 aaPredicted RBP7.82□□□□□ -1.16
TOP3A-209ENST00000580095 LINC00315P59091 139 aa7.82□□□□□ -1.16
TOP3A-209ENST00000580095 VCX2Q9H322 139 aa7.82□□□□□ -1.16
TOP3A-209ENST00000580095 ZNF256Q9Y2P7 627 aaPredicted RBP7.82□□□□□ -1.16
TOP3A-209ENST00000580095 PRRC2AP48634 2157 aaKnown RBP7.81□□□□□ -1.16
TOP3A-209ENST00000580095 IGHV4OR15-8A0A075B7B6 117 aa7.81□□□□□ -1.16
TOP3A-209ENST00000580095 A0A087WW49 117 aa7.81□□□□□ -1.16
TOP3A-209ENST00000580095 PRSS29PA6NIE9 313 aa7.81□□□□□ -1.16
TOP3A-209ENST00000580095 KLLNB2CW77 178 aa7.81□□□□□ -1.16
TOP3A-209ENST00000580095 C5orf47Q569G3 176 aa7.81□□□□□ -1.16
TOP3A-209ENST00000580095 SUMO4Q6EEV6 95 aa7.81□□□□□ -1.16
TOP3A-209ENST00000580095 BAALCQ8WXS3 180 aa7.81□□□□□ -1.16
TOP3A-209ENST00000580095 TOMM6Q96B49 74 aa7.81□□□□□ -1.16
TOP3A-209ENST00000580095 H7C1H1 209 aa7.81□□□□□ -1.16
TOP3A-209ENST00000580095 FABP2P12104 132 aa7.81□□□□□ -1.16
TOP3A-209ENST00000580095 XGP55808 180 aa7.81□□□□□ -1.16
TOP3A-209ENST00000580095 ETDBQ3ZM63 59 aa7.81□□□□□ -1.16
TOP3A-209ENST00000580095 ORMDL2Q53FV1 153 aa7.81□□□□□ -1.16
TOP3A-209ENST00000580095 BBC3Q96PG8 261 aaPredicted RBP7.81□□□□□ -1.16
TOP3A-209ENST00000580095 F8VRH5 84 aa7.8□□□□□ -1.16
TOP3A-209ENST00000580095 SMIM13P0DJ93 91 aa7.8□□□□□ -1.16
TOP3A-209ENST00000580095 FHL3Q13643 280 aa7.8□□□□□ -1.16
TOP3A-209ENST00000580095 Q8N1Y9 231 aa7.8□□□□□ -1.16
TOP3A-209ENST00000580095 LINC01356Q8N9X3 169 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms