RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 NEXN-AS1Q8NBZ9 246 aa6.52□□□□□ -1.37
GGA3-206ENST00000578773 DYNC2LI1Q8TCX1 351 aa6.52□□□□□ -1.37
GGA3-206ENST00000578773 DIRC1Q969H9 104 aa6.52□□□□□ -1.37
GGA3-206ENST00000578773 RPL36ALQ969Q0 106 aaKnown RBP6.52□□□□□ -1.37
GGA3-206ENST00000578773 SLIRPQ9GZT3 109 aaKnown RBP6.52□□□□□ -1.37
GGA3-206ENST00000578773 CDIP1Q9H305 208 aa6.52□□□□□ -1.37
GGA3-206ENST00000578773 RSL24D1Q9UHA3 163 aaKnown RBP6.52□□□□□ -1.37
GGA3-206ENST00000578773 GCGP01275 180 aa6.51□□□□□ -1.37
GGA3-206ENST00000578773 IGLV7-43P04211 117 aa6.51□□□□□ -1.37
GGA3-206ENST00000578773 TAS2R30P59541 319 aa6.51□□□□□ -1.37
GGA3-206ENST00000578773 SPCS2Q15005 226 aa6.51□□□□□ -1.37
GGA3-206ENST00000578773 IAH1Q2TAA2 248 aaPredicted RBP6.51□□□□□ -1.37
GGA3-206ENST00000578773 TOMM5Q8N4H5 51 aa6.51□□□□□ -1.37
GGA3-206ENST00000578773 SLC25A21Q9BQT8 299 aaPredicted RBP6.51□□□□□ -1.37
GGA3-206ENST00000578773 NMES1Q9C002 83 aa6.51□□□□□ -1.37
GGA3-206ENST00000578773 UQCC1Q9NVA1 299 aa6.51□□□□□ -1.37
GGA3-206ENST00000578773 RABL2AQ9UBK7 228 aaPredicted RBP6.51□□□□□ -1.37
GGA3-206ENST00000578773 GAGE12HA6NDE8 117 aa6.5□□□□□ -1.37
GGA3-206ENST00000578773 H3BVH4 76 aa6.5□□□□□ -1.37
GGA3-206ENST00000578773 L7N2F9 121 aa6.5□□□□□ -1.37
GGA3-206ENST00000578773 OR7C2O60412 319 aa6.5□□□□□ -1.37
GGA3-206ENST00000578773 UBE2D1P51668 147 aa6.5□□□□□ -1.37
GGA3-206ENST00000578773 S100A10P60903 97 aa6.5□□□□□ -1.37
GGA3-206ENST00000578773 VAMP2P63027 116 aa6.5□□□□□ -1.37
GGA3-206ENST00000578773 FCGBPQ9Y6R7 5405 aaPredicted RBP6.5□□□□□ -1.37
GGA3-206ENST00000578773 AMTP48728 403 aa6.49□□□□□ -1.37
GGA3-206ENST00000578773 UBE2L3P68036 154 aaKnown RBP6.49□□□□□ -1.37
GGA3-206ENST00000578773 ARL6IP6Q8N6S5 226 aa6.49□□□□□ -1.37
GGA3-206ENST00000578773 OR10G8Q8NGN5 311 aa6.49□□□□□ -1.37
GGA3-206ENST00000578773 C11orf1Q9H5F2 150 aa6.49□□□□□ -1.37
GGA3-206ENST00000578773 LSM5Q9Y4Y9 91 aaKnown RBP6.49□□□□□ -1.37
GGA3-206ENST00000578773 IGSF23A1L1A6 192 aa6.48□□□□□ -1.37
GGA3-206ENST00000578773 RHODO00212 210 aa6.48□□□□□ -1.37
GGA3-206ENST00000578773 LORP23490 312 aaPredicted RBP6.48□□□□□ -1.37
GGA3-206ENST00000578773 AP3S2P59780 193 aa6.48□□□□□ -1.37
GGA3-206ENST00000578773 PYDC2Q56P42 97 aa6.48□□□□□ -1.37
GGA3-206ENST00000578773 TRIM63Q969Q1 353 aa6.48□□□□□ -1.37
GGA3-206ENST00000578773 SFRP2Q96HF1 295 aa6.48□□□□□ -1.37
GGA3-206ENST00000578773 NPCDR1Q9BY65 106 aa6.48□□□□□ -1.37
GGA3-206ENST00000578773 FLVCR2Q9UPI3 526 aa6.48□□□□□ -1.37
GGA3-206ENST00000578773 TRAV1-1A0A0B4J248 108 aa6.47□□□□□ -1.37
GGA3-206ENST00000578773 TRBV10-1A0A0K0K1A3 114 aa6.47□□□□□ -1.37
GGA3-206ENST00000578773 MT1HP80294 61 aa6.47□□□□□ -1.37
GGA3-206ENST00000578773 PIK3CD-AS1Q5SR53 167 aa6.47□□□□□ -1.37
GGA3-206ENST00000578773 GVQW2A0A096LPI5 108 aaPredicted RBP6.46□□□□□ -1.38
GGA3-206ENST00000578773 TRAV8-4A0A0B4J246 113 aa6.46□□□□□ -1.38
GGA3-206ENST00000578773 P01737 135 aa6.46□□□□□ -1.38
GGA3-206ENST00000578773 CRYGAP11844 174 aa6.46□□□□□ -1.38
GGA3-206ENST00000578773 S100A4P26447 101 aaKnown RBP6.46□□□□□ -1.38
GGA3-206ENST00000578773 PTTG1IPP53801 180 aa6.46□□□□□ -1.38
GGA3-206ENST00000578773 TPRXLQ17RH7 258 aa6.46□□□□□ -1.38
GGA3-206ENST00000578773 KRTAP19-2Q3LHN2 52 aa6.46□□□□□ -1.38
GGA3-206ENST00000578773 SPANXN2Q5MJ10 180 aa6.46□□□□□ -1.38
GGA3-206ENST00000578773 THAP6Q8TBB0 222 aa6.46□□□□□ -1.38
GGA3-206ENST00000578773 OTORQ9NRC9 128 aa6.46□□□□□ -1.38
GGA3-206ENST00000578773 LINC00474Q9P2X8 69 aa6.46□□□□□ -1.38
GGA3-206ENST00000578773 GRIFINA4D1Z8 144 aa6.45□□□□□ -1.38
GGA3-206ENST00000578773 GAGE2BQ13066 116 aa6.45□□□□□ -1.38
GGA3-206ENST00000578773 MITD1Q8WV92 249 aa6.45□□□□□ -1.38
GGA3-206ENST00000578773 IL36BQ9NZH7 164 aa6.45□□□□□ -1.38
GGA3-206ENST00000578773 OR5AC2Q9NZP5 309 aa6.45□□□□□ -1.38
GGA3-206ENST00000578773 IGKV3OR2-268A0A0C4DH90 116 aa6.44□□□□□ -1.38
GGA3-206ENST00000578773 FAM25EA8MYX2 175 aa6.44□□□□□ -1.38
GGA3-206ENST00000578773 M0R381 172 aa6.44□□□□□ -1.38
GGA3-206ENST00000578773 ARMS2P0C7Q2 107 aa6.44□□□□□ -1.38
GGA3-206ENST00000578773 S100A11P31949 105 aa6.44□□□□□ -1.38
GGA3-206ENST00000578773 RPL13AP40429 203 aaKnown RBP6.44□□□□□ -1.38
GGA3-206ENST00000578773 KRTAP10-6P60371 365 aaPredicted RBP6.44□□□□□ -1.38
GGA3-206ENST00000578773 RAB2AP61019 212 aa6.44□□□□□ -1.38
GGA3-206ENST00000578773 PKIAP61925 76 aa6.44□□□□□ -1.38
GGA3-206ENST00000578773 C9orf116Q5BN46 136 aaPredicted RBP6.44□□□□□ -1.38
GGA3-206ENST00000578773 CMTM2Q8TAZ6 248 aa6.44□□□□□ -1.38
GGA3-206ENST00000578773 DERL1Q9BUN8 251 aa6.44□□□□□ -1.38
GGA3-206ENST00000578773 TRBV6-1A0A0K0K1D8 114 aa6.43□□□□□ -1.38
GGA3-206ENST00000578773 NDUFB6O95139 128 aa6.43□□□□□ -1.38
GGA3-206ENST00000578773 SULT1A1P50225 295 aa6.43□□□□□ -1.38
GGA3-206ENST00000578773 OR11H4Q8NGC9 324 aa6.43□□□□□ -1.38
GGA3-206ENST00000578773 CARD19Q96LW7 228 aa6.43□□□□□ -1.38
GGA3-206ENST00000578773 PHLDA3Q9Y5J5 127 aa6.43□□□□□ -1.38
GGA3-206ENST00000578773 TRBV25-1A0A075B6N4 114 aa6.42□□□□□ -1.38
GGA3-206ENST00000578773 A0A087X002 238 aa6.42□□□□□ -1.38
GGA3-206ENST00000578773 GZMBP10144 247 aa6.42□□□□□ -1.38
GGA3-206ENST00000578773 BCL2P10415 239 aa6.42□□□□□ -1.38
GGA3-206ENST00000578773 PRNTQ86SH4 94 aa6.42□□□□□ -1.38
GGA3-206ENST00000578773 STX12Q86Y82 276 aa6.42□□□□□ -1.38
GGA3-206ENST00000578773 TMEM252Q8N6L7 170 aa6.42□□□□□ -1.38
GGA3-206ENST00000578773 SSBP4Q9BWG4 385 aaPredicted RBP6.42□□□□□ -1.38
GGA3-206ENST00000578773 RPP21Q9H633 154 aaKnown RBP6.42□□□□□ -1.38
GGA3-206ENST00000578773 MBD2Q9UBB5 411 aa6.42□□□□□ -1.38
GGA3-206ENST00000578773 PSG8Q9UQ74 426 aa6.42□□□□□ -1.38
GGA3-206ENST00000578773 IGLV7-46A0A075B6I9 117 aa6.41□□□□□ -1.38
GGA3-206ENST00000578773 M0R036 132 aa6.41□□□□□ -1.38
GGA3-206ENST00000578773 HBG1P69891 147 aa6.41□□□□□ -1.38
GGA3-206ENST00000578773 HBG2P69892 147 aa6.41□□□□□ -1.38
GGA3-206ENST00000578773 ZNF56Q15929 161 aa6.41□□□□□ -1.38
GGA3-206ENST00000578773 IQCJQ1A5X6 159 aa6.41□□□□□ -1.38
GGA3-206ENST00000578773 SMUG1Q53HV7 270 aa6.41□□□□□ -1.38
GGA3-206ENST00000578773 CFAP161Q6P656 301 aa6.41□□□□□ -1.38
GGA3-206ENST00000578773 SDHCQ99643 169 aaPredicted RBP6.41□□□□□ -1.38
GGA3-206ENST00000578773 NDFIP1Q9BT67 221 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms