RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 PRSS29PA6NIE9 313 aa6.89□□□□□ -1.31
CDK5RAP3-208ENST00000578525 OR11H12B2RN74 326 aa6.89□□□□□ -1.31
CDK5RAP3-208ENST00000578525 H3BMM0 161 aa6.89□□□□□ -1.31
CDK5RAP3-208ENST00000578525 K7EP13 123 aa6.89□□□□□ -1.31
CDK5RAP3-208ENST00000578525 M0QY20 66 aa6.89□□□□□ -1.31
CDK5RAP3-208ENST00000578525 RBMY1DP0C7P1 496 aaKnown RBP6.89□□□□□ -1.31
CDK5RAP3-208ENST00000578525 GCSHP23434 173 aa6.89□□□□□ -1.31
CDK5RAP3-208ENST00000578525 RHOHQ15669 191 aa6.89□□□□□ -1.31
CDK5RAP3-208ENST00000578525 KHDC1LQ5JSQ8 128 aa6.89□□□□□ -1.31
CDK5RAP3-208ENST00000578525 PAPPA-AS1Q5QFB9 102 aa6.89□□□□□ -1.31
CDK5RAP3-208ENST00000578525 FAM74A4Q5TZK3 123 aa6.89□□□□□ -1.31
CDK5RAP3-208ENST00000578525 MORN3Q6PF18 240 aaPredicted RBP6.89□□□□□ -1.31
CDK5RAP3-208ENST00000578525 MAPKAPK5-AS1Q8N8E1 139 aa6.89□□□□□ -1.31
CDK5RAP3-208ENST00000578525 KLHL30-AS1Q8NEE0 82 aa6.89□□□□□ -1.31
CDK5RAP3-208ENST00000578525 OR11H2Q8NH07 326 aa6.89□□□□□ -1.31
CDK5RAP3-208ENST00000578525 TIMM17AQ99595 171 aa6.89□□□□□ -1.31
CDK5RAP3-208ENST00000578525 PIEZO1Q92508 2521 aa6.88□□□□□ -1.31
CDK5RAP3-208ENST00000578525 MUC4Q99102 2169 aa6.88□□□□□ -1.31
CDK5RAP3-208ENST00000578525 IGIPA6NJ69 53 aa6.88□□□□□ -1.31
CDK5RAP3-208ENST00000578525 E9PLD3 99 aa6.88□□□□□ -1.31
CDK5RAP3-208ENST00000578525 SMIM13P0DJ93 91 aa6.88□□□□□ -1.31
CDK5RAP3-208ENST00000578525 RBMY1A1P0DJD3 496 aaKnown RBP6.88□□□□□ -1.31
CDK5RAP3-208ENST00000578525 RBMY1CP0DJD4 496 aa6.88□□□□□ -1.31
CDK5RAP3-208ENST00000578525 RBMY1FQ15415 496 aaKnown RBP6.88□□□□□ -1.31
CDK5RAP3-208ENST00000578525 NSUN5P1Q3KNT7 163 aa6.88□□□□□ -1.31
CDK5RAP3-208ENST00000578525 Q6ZSV7 163 aa6.88□□□□□ -1.31
CDK5RAP3-208ENST00000578525 TMEM61Q8N0U2 210 aa6.88□□□□□ -1.31
CDK5RAP3-208ENST00000578525 DLX4Q92988 240 aaPredicted RBP6.88□□□□□ -1.31
CDK5RAP3-208ENST00000578525 LINC00467Q9BRT7 94 aa6.88□□□□□ -1.31
CDK5RAP3-208ENST00000578525 TM2D2Q9BX73 214 aa6.88□□□□□ -1.31
CDK5RAP3-208ENST00000578525 MAP6D1Q9H9H5 199 aa6.88□□□□□ -1.31
CDK5RAP3-208ENST00000578525 EDA2RQ9HAV5 297 aa6.88□□□□□ -1.31
CDK5RAP3-208ENST00000578525 MYMXA0A1B0GTQ4 84 aa6.87□□□□□ -1.31
CDK5RAP3-208ENST00000578525 DNAJC9-AS1A6NH13 148 aa6.87□□□□□ -1.31
CDK5RAP3-208ENST00000578525 H3BUT2 72 aa6.87□□□□□ -1.31
CDK5RAP3-208ENST00000578525 TSHBP01222 138 aa6.87□□□□□ -1.31
CDK5RAP3-208ENST00000578525 FOSL1P15407 271 aa6.87□□□□□ -1.31
CDK5RAP3-208ENST00000578525 FXYD2P54710 66 aa6.87□□□□□ -1.31
CDK5RAP3-208ENST00000578525 HERVK_113P61574 105 aa6.87□□□□□ -1.31
CDK5RAP3-208ENST00000578525 ZNF415Q09FC8 603 aa6.87□□□□□ -1.31
CDK5RAP3-208ENST00000578525 PMVKQ15126 192 aa6.87□□□□□ -1.31
CDK5RAP3-208ENST00000578525 ZNF876PQ49A33 203 aa6.87□□□□□ -1.31
CDK5RAP3-208ENST00000578525 GTF2H5Q6ZYL4 71 aa6.87□□□□□ -1.31
CDK5RAP3-208ENST00000578525 CEND1Q8N111 149 aa6.87□□□□□ -1.31
CDK5RAP3-208ENST00000578525 PTH2Q96A98 100 aa6.87□□□□□ -1.31
CDK5RAP3-208ENST00000578525 DUX3Q96PT4 197 aa6.87□□□□□ -1.31
CDK5RAP3-208ENST00000578525 SPAG8Q99932 426 aaPredicted RBP6.87□□□□□ -1.31
CDK5RAP3-208ENST00000578525 RELNP78509 3460 aa6.86□□□□□ -1.31
CDK5RAP3-208ENST00000578525 IGLV4-69A0A075B6H9 119 aa6.86□□□□□ -1.31
CDK5RAP3-208ENST00000578525 TRAV25A0A0B4J276 109 aa6.86□□□□□ -1.31
CDK5RAP3-208ENST00000578525 GAGE10A6NGK3 116 aa6.86□□□□□ -1.31
CDK5RAP3-208ENST00000578525 K7EP34 96 aa6.86□□□□□ -1.31
CDK5RAP3-208ENST00000578525 DEFB114Q30KQ6 69 aa6.86□□□□□ -1.31
CDK5RAP3-208ENST00000578525 PIK3CD-AS1Q5SR53 167 aa6.86□□□□□ -1.31
CDK5RAP3-208ENST00000578525 UFSP1Q6NVU6 142 aa6.86□□□□□ -1.31
CDK5RAP3-208ENST00000578525 WFDC11Q8NEX6 87 aa6.86□□□□□ -1.31
CDK5RAP3-208ENST00000578525 RAB37Q96AX2 223 aa6.86□□□□□ -1.31
CDK5RAP3-208ENST00000578525 RAX2Q96IS3 184 aa6.86□□□□□ -1.31
CDK5RAP3-208ENST00000578525 PRADC1Q9BSG0 188 aa6.86□□□□□ -1.31
CDK5RAP3-208ENST00000578525 CST9LQ9H4G1 147 aa6.86□□□□□ -1.31
CDK5RAP3-208ENST00000578525 TACC2O95359 2948 aa6.86□□□□□ -1.31
CDK5RAP3-208ENST00000578525 TRBV7-3A0A075B6L6 115 aa6.85□□□□□ -1.31
CDK5RAP3-208ENST00000578525 A0A1W2PPM0 123 aa6.85□□□□□ -1.31
CDK5RAP3-208ENST00000578525 C11orf86A6NJI1 115 aa6.85□□□□□ -1.31
CDK5RAP3-208ENST00000578525 A8MWV9 139 aa6.85□□□□□ -1.31
CDK5RAP3-208ENST00000578525 I3L3M4 83 aa6.85□□□□□ -1.31
CDK5RAP3-208ENST00000578525 M0R2P5 195 aa6.85□□□□□ -1.31
CDK5RAP3-208ENST00000578525 RPL39P62891 51 aaKnown RBP6.85□□□□□ -1.31
CDK5RAP3-208ENST00000578525 CLUHP3Q96NS8 147 aa6.85□□□□□ -1.31
CDK5RAP3-208ENST00000578525 INSP01308 110 aa6.84□□□□□ -1.31
CDK5RAP3-208ENST00000578525 C20orf203Q8NBC4 194 aa6.84□□□□□ -1.31
CDK5RAP3-208ENST00000578525 PHLDA1Q8WV24 401 aaPredicted RBP6.84□□□□□ -1.31
CDK5RAP3-208ENST00000578525 HIST1H4GQ99525 98 aa6.84□□□□□ -1.31
CDK5RAP3-208ENST00000578525 NAA38Q9BRA0 125 aaKnown RBP6.84□□□□□ -1.31
CDK5RAP3-208ENST00000578525 ZNF815PA8K554 130 aa6.83□□□□□ -1.32
CDK5RAP3-208ENST00000578525 FABP2P12104 132 aa6.83□□□□□ -1.32
CDK5RAP3-208ENST00000578525 FHL3Q13643 280 aa6.83□□□□□ -1.32
CDK5RAP3-208ENST00000578525 CD300EQ496F6 205 aaPredicted RBP6.83□□□□□ -1.32
CDK5RAP3-208ENST00000578525 SAMD5Q5TGI4 173 aa6.83□□□□□ -1.32
CDK5RAP3-208ENST00000578525 NFE4Q86UQ8 179 aa6.83□□□□□ -1.32
CDK5RAP3-208ENST00000578525 OR5A1Q8NGJ0 315 aa6.83□□□□□ -1.32
CDK5RAP3-208ENST00000578525 RNASE8Q8TDE3 154 aaKnown RBP6.83□□□□□ -1.32
CDK5RAP3-208ENST00000578525 DEFB104AQ8WTQ1 72 aa6.83□□□□□ -1.32
CDK5RAP3-208ENST00000578525 SPXQ9BT56 116 aa6.83□□□□□ -1.32
CDK5RAP3-208ENST00000578525 NHP2Q9NX24 153 aaKnown RBP6.83□□□□□ -1.32
CDK5RAP3-208ENST00000578525 SPCS1Q9Y6A9 102 aa6.83□□□□□ -1.32
CDK5RAP3-208ENST00000578525 SPTAN1Q13813 2472 aaKnown RBP6.83□□□□□ -1.32
CDK5RAP3-208ENST00000578525 K7ERJ3 54 aa6.82□□□□□ -1.32
CDK5RAP3-208ENST00000578525 RHODO00212 210 aa6.82□□□□□ -1.32
CDK5RAP3-208ENST00000578525 P0DMU3 169 aa6.82□□□□□ -1.32
CDK5RAP3-208ENST00000578525 FAM231AP0DMU4 169 aa6.82□□□□□ -1.32
CDK5RAP3-208ENST00000578525 FAM231CP0DMU5 169 aa6.82□□□□□ -1.32
CDK5RAP3-208ENST00000578525 CD28P10747 220 aa6.82□□□□□ -1.32
CDK5RAP3-208ENST00000578525 HTN1P15515 57 aa6.82□□□□□ -1.32
CDK5RAP3-208ENST00000578525 KRTAP1-1Q07627 177 aa6.82□□□□□ -1.32
CDK5RAP3-208ENST00000578525 SCGB2A2Q13296 93 aa6.82□□□□□ -1.32
CDK5RAP3-208ENST00000578525 C12orf74Q32Q52 190 aa6.82□□□□□ -1.32
CDK5RAP3-208ENST00000578525 LINC01587Q99440 93 aa6.82□□□□□ -1.32
CDK5RAP3-208ENST00000578525 C16orf95Q9H693 158 aa6.82□□□□□ -1.32
CDK5RAP3-208ENST00000578525 ESM1Q9NQ30 184 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 166.4 ms