RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 GAGE5Q13069 117 aa7.61□□□□□ -1.19
SMARCE1-214ENST00000578112 GAGE6Q13070 117 aa7.61□□□□□ -1.19
SMARCE1-214ENST00000578112 ERCC8Q13216 396 aa7.61□□□□□ -1.19
SMARCE1-214ENST00000578112 KHDC3LQ587J8 217 aa7.61□□□□□ -1.19
SMARCE1-214ENST00000578112 TMEM252Q8N6L7 170 aa7.61□□□□□ -1.19
SMARCE1-214ENST00000578112 LSM5Q9Y4Y9 91 aaKnown RBP7.61□□□□□ -1.19
SMARCE1-214ENST00000578112 K7EQD1 137 aa7.6□□□□□ -1.19
SMARCE1-214ENST00000578112 KRTAP10-1P60331 282 aa7.6□□□□□ -1.19
SMARCE1-214ENST00000578112 IL15RAQ13261 267 aa7.6□□□□□ -1.19
SMARCE1-214ENST00000578112 C8orf49Q96NF6 230 aa7.6□□□□□ -1.19
SMARCE1-214ENST00000578112 UBE2L5PA0A1B0GUS4 154 aa7.6□□□□□ -1.19
SMARCE1-214ENST00000578112 M0R3E3 92 aa7.6□□□□□ -1.19
SMARCE1-214ENST00000578112 ATP5SQ99766 215 aa7.6□□□□□ -1.19
SMARCE1-214ENST00000578112 SLC25A2Q9BXI2 301 aa7.6□□□□□ -1.19
SMARCE1-214ENST00000578112 FAM24AA6NFZ4 105 aa7.59□□□□□ -1.19
SMARCE1-214ENST00000578112 LINC01556Q5JQF7 62 aa7.59□□□□□ -1.19
SMARCE1-214ENST00000578112 Q6ZSN1 163 aa7.59□□□□□ -1.19
SMARCE1-214ENST00000578112 FAM167A-AS1Q96KT0 104 aa7.59□□□□□ -1.19
SMARCE1-214ENST00000578112 NPCDR1Q9BY65 106 aa7.59□□□□□ -1.19
SMARCE1-214ENST00000578112 SLC25A31Q9H0C2 315 aa7.59□□□□□ -1.19
SMARCE1-214ENST00000578112 MRPL16Q9NX20 251 aaKnown RBP7.59□□□□□ -1.19
SMARCE1-214ENST00000578112 TNFSF18Q9UNG2 199 aa7.59□□□□□ -1.19
SMARCE1-214ENST00000578112 SIX6O95475 246 aa7.59□□□□□ -1.2
SMARCE1-214ENST00000578112 COX11Q9Y6N1 276 aa7.59□□□□□ -1.2
SMARCE1-214ENST00000578112 IBA57-AS1B1ANH7 110 aa7.58□□□□□ -1.2
SMARCE1-214ENST00000578112 C17orf112F2Z3M2 114 aa7.58□□□□□ -1.2
SMARCE1-214ENST00000578112 PRAF2O60831 178 aa7.58□□□□□ -1.2
SMARCE1-214ENST00000578112 CST7O76096 145 aa7.58□□□□□ -1.2
SMARCE1-214ENST00000578112 CRYGDP07320 174 aa7.58□□□□□ -1.2
SMARCE1-214ENST00000578112 LAGE3Q14657 143 aa7.58□□□□□ -1.2
SMARCE1-214ENST00000578112 ISOC2Q96AB3 205 aa7.58□□□□□ -1.2
SMARCE1-214ENST00000578112 PFN1P07737 140 aaKnown RBP7.57□□□□□ -1.2
SMARCE1-214ENST00000578112 ADCYAP1P18509 176 aa7.57□□□□□ -1.2
SMARCE1-214ENST00000578112 NDUFA6P56556 154 aa7.57□□□□□ -1.2
SMARCE1-214ENST00000578112 PDZD11Q5EBL8 140 aa7.57□□□□□ -1.2
SMARCE1-214ENST00000578112 ALKAL2Q6UX46 152 aa7.57□□□□□ -1.2
SMARCE1-214ENST00000578112 NIT1Q86X76 327 aa7.57□□□□□ -1.2
SMARCE1-214ENST00000578112 EXOC3-AS1Q8N2X6 119 aa7.57□□□□□ -1.2
SMARCE1-214ENST00000578112 PAXXQ9BUH6 204 aa7.57□□□□□ -1.2
SMARCE1-214ENST00000578112 TM2D2Q9BX73 214 aa7.57□□□□□ -1.2
SMARCE1-214ENST00000578112 SPANXA1Q9NS26 97 aa7.57□□□□□ -1.2
SMARCE1-214ENST00000578112 VPS13BQ7Z7G8 4022 aa7.57□□□□□ -1.2
SMARCE1-214ENST00000578112 IGLV5-52A0A0A0MRZ9 124 aa7.57□□□□□ -1.2
SMARCE1-214ENST00000578112 INMT-MINDY4F8WBC2 141 aa7.57□□□□□ -1.2
SMARCE1-214ENST00000578112 M0R2P5 195 aa7.57□□□□□ -1.2
SMARCE1-214ENST00000578112 GYPEP15421 78 aa7.57□□□□□ -1.2
SMARCE1-214ENST00000578112 PRR9Q5T870 116 aa7.57□□□□□ -1.2
SMARCE1-214ENST00000578112 FAM159AQ6UWV7 190 aa7.57□□□□□ -1.2
SMARCE1-214ENST00000578112 FXYD5Q96DB9 178 aa7.57□□□□□ -1.2
SMARCE1-214ENST00000578112 IGKV2-40A0A087WW87 121 aaPredicted RBP7.56□□□□□ -1.2
SMARCE1-214ENST00000578112 TRAV8-6A0A0B4J262 113 aa7.56□□□□□ -1.2
SMARCE1-214ENST00000578112 LYRM1O43325 122 aa7.56□□□□□ -1.2
SMARCE1-214ENST00000578112 IGKV2D-40P01614 121 aaPredicted RBP7.56□□□□□ -1.2
SMARCE1-214ENST00000578112 PLA2G1BP04054 148 aaKnown RBP7.56□□□□□ -1.2
SMARCE1-214ENST00000578112 PYYP10082 97 aa7.56□□□□□ -1.2
SMARCE1-214ENST00000578112 WFDC10BQ8IUB3 73 aa7.56□□□□□ -1.2
SMARCE1-214ENST00000578112 BLNKQ8WV28 456 aa7.56□□□□□ -1.2
SMARCE1-214ENST00000578112 KCNS1Q96KK3 526 aa7.56□□□□□ -1.2
SMARCE1-214ENST00000578112 MIEN1Q9BRT3 115 aa7.56□□□□□ -1.2
SMARCE1-214ENST00000578112 LRCOL1A6NCL2 159 aa7.56□□□□□ -1.2
SMARCE1-214ENST00000578112 IGHV3-53P01767 116 aa7.56□□□□□ -1.2
SMARCE1-214ENST00000578112 PMCHP20382 165 aa7.56□□□□□ -1.2
SMARCE1-214ENST00000578112 TAS2R45P59539 299 aa7.56□□□□□ -1.2
SMARCE1-214ENST00000578112 PLA2G10O15496 165 aa7.55□□□□□ -1.2
SMARCE1-214ENST00000578112 ESDP10768 282 aa7.55□□□□□ -1.2
SMARCE1-214ENST00000578112 IQCJQ1A5X6 159 aa7.55□□□□□ -1.2
SMARCE1-214ENST00000578112 TMUB2Q71RG4 321 aa7.55□□□□□ -1.2
SMARCE1-214ENST00000578112 Q8N814 137 aa7.55□□□□□ -1.2
SMARCE1-214ENST00000578112 TRAV21A0A0B4J279 112 aa7.55□□□□□ -1.2
SMARCE1-214ENST00000578112 KRTAP29-1A8MX34 341 aaPredicted RBP7.55□□□□□ -1.2
SMARCE1-214ENST00000578112 PSCAO43653 123 aa7.55□□□□□ -1.2
SMARCE1-214ENST00000578112 IFNA1P01562 189 aa7.55□□□□□ -1.2
SMARCE1-214ENST00000578112 FABP4P15090 132 aa7.55□□□□□ -1.2
SMARCE1-214ENST00000578112 GATA1P15976 413 aaPredicted RBP7.55□□□□□ -1.2
SMARCE1-214ENST00000578112 S100A10P60903 97 aa7.55□□□□□ -1.2
SMARCE1-214ENST00000578112 RHEBQ15382 184 aa7.55□□□□□ -1.2
SMARCE1-214ENST00000578112 KCNIP4Q6PIL6 250 aa7.55□□□□□ -1.2
SMARCE1-214ENST00000578112 IGHV3-38A0A0C4DH36 116 aa7.54□□□□□ -1.2
SMARCE1-214ENST00000578112 CYCSP99999 105 aaKnown RBP7.54□□□□□ -1.2
SMARCE1-214ENST00000578112 MIR17HGQ75NE6 70 aa7.54□□□□□ -1.2
SMARCE1-214ENST00000578112 PRADC1Q9BSG0 188 aa7.54□□□□□ -1.2
SMARCE1-214ENST00000578112 NMES1Q9C002 83 aa7.54□□□□□ -1.2
SMARCE1-214ENST00000578112 WDR61Q9GZS3 305 aaKnown RBP7.54□□□□□ -1.2
SMARCE1-214ENST00000578112 OTORQ9NRC9 128 aa7.54□□□□□ -1.2
SMARCE1-214ENST00000578112 A0A0U1RRA0 63 aa7.54□□□□□ -1.2
SMARCE1-214ENST00000578112 TRBV6-4A0A1B0GX49 114 aa7.54□□□□□ -1.2
SMARCE1-214ENST00000578112 DIRC3C9JPN6 131 aa7.54□□□□□ -1.2
SMARCE1-214ENST00000578112 SEC11BP0C7V7 166 aa7.54□□□□□ -1.2
SMARCE1-214ENST00000578112 PRB4P10163 310 aaPredicted RBP7.54□□□□□ -1.2
SMARCE1-214ENST00000578112 PIK3CD-AS1Q5SR53 167 aa7.54□□□□□ -1.2
SMARCE1-214ENST00000578112 LELP1Q5T871 98 aa7.54□□□□□ -1.2
SMARCE1-214ENST00000578112 SDF2L1Q9HCN8 221 aa7.54□□□□□ -1.2
SMARCE1-214ENST00000578112 RHOHQ15669 191 aa7.53□□□□□ -1.2
SMARCE1-214ENST00000578112 MDFICQ9P1T7 246 aa7.53□□□□□ -1.2
SMARCE1-214ENST00000578112 IGHV3-16A0A0C4DH30 117 aa7.53□□□□□ -1.2
SMARCE1-214ENST00000578112 SMIM17P0DL12 118 aa7.53□□□□□ -1.2
SMARCE1-214ENST00000578112 SMAGPQ0VAQ4 97 aa7.53□□□□□ -1.2
SMARCE1-214ENST00000578112 TMEM183BQ1AE95 376 aa7.53□□□□□ -1.2
SMARCE1-214ENST00000578112 TMEM183AQ8IXX5 376 aa7.53□□□□□ -1.2
SMARCE1-214ENST00000578112 PHYHIPLQ96FC7 376 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 328.4 ms