RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 SMIM2Q9BVW6 85 aa20.32■□□□□ 0.84
LIMD2-203ENST00000578067 SUMO2P61956 95 aaKnown RBP20.32■□□□□ 0.84
LIMD2-203ENST00000578067 RPL39LQ96EH5 51 aaKnown RBP20.32■□□□□ 0.84
LIMD2-203ENST00000578067 A0A087WWL8 130 aa20.31■□□□□ 0.84
LIMD2-203ENST00000578067 IGLV1-51P01701 117 aa20.31■□□□□ 0.84
LIMD2-203ENST00000578067 STHQ8IWL8 128 aa20.31■□□□□ 0.84
LIMD2-203ENST00000578067 MCRIP2Q9BUT9 160 aaKnown RBP20.31■□□□□ 0.84
LIMD2-203ENST00000578067 CMC4P56277 68 aaPredicted RBP20.31■□□□□ 0.84
LIMD2-203ENST00000578067 LAGE3Q14657 143 aa20.31■□□□□ 0.84
LIMD2-203ENST00000578067 IFI27L1Q96BM0 104 aa20.31■□□□□ 0.84
LIMD2-203ENST00000578067 HTN1P15515 57 aa20.3■□□□□ 0.84
LIMD2-203ENST00000578067 TMEM158Q8WZ71 300 aa20.3■□□□□ 0.84
LIMD2-203ENST00000578067 TCAPO15273 167 aa20.29■□□□□ 0.84
LIMD2-203ENST00000578067 CRLF1O75462 422 aa20.29■□□□□ 0.84
LIMD2-203ENST00000578067 INSP01308 110 aa20.29■□□□□ 0.84
LIMD2-203ENST00000578067 WNK1Q9H4A3 2382 aa20.28■□□□□ 0.84
LIMD2-203ENST00000578067 SETD2Q9BYW2 2564 aaPredicted RBP20.28■□□□□ 0.84
LIMD2-203ENST00000578067 ZNF876PQ49A33 203 aa20.27■□□□□ 0.84
LIMD2-203ENST00000578067 SUMO4Q6EEV6 95 aa20.27■□□□□ 0.84
LIMD2-203ENST00000578067 TRPT1Q86TN4 253 aaKnown RBP20.27■□□□□ 0.84
LIMD2-203ENST00000578067 LINC00467Q9BRT7 94 aa20.27■□□□□ 0.84
LIMD2-203ENST00000578067 IGLL1P15814 213 aa20.27■□□□□ 0.84
LIMD2-203ENST00000578067 F5H697 171 aa20.26■□□□□ 0.83
LIMD2-203ENST00000578067 LINC01587Q99440 93 aa20.26■□□□□ 0.83
LIMD2-203ENST00000578067 PMCHL2Q9BQD1 86 aa20.26■□□□□ 0.83
LIMD2-203ENST00000578067 CRYGDP07320 174 aa20.26■□□□□ 0.83
LIMD2-203ENST00000578067 IGLC3P0DOY3 106 aa20.26■□□□□ 0.83
LIMD2-203ENST00000578067 FAM74A4Q5TZK3 123 aa20.26■□□□□ 0.83
LIMD2-203ENST00000578067 SETXQ7Z333 2677 aaKnown RBP20.25■□□□□ 0.83
LIMD2-203ENST00000578067 C18orf15Q96N68 181 aa20.25■□□□□ 0.83
LIMD2-203ENST00000578067 LGALS9BQ3B8N2 356 aa20.24■□□□□ 0.83
LIMD2-203ENST00000578067 LGALS9CQ6DKI2 356 aa20.24■□□□□ 0.83
LIMD2-203ENST00000578067 K7EMI3 77 aa20.24■□□□□ 0.83
LIMD2-203ENST00000578067 PF4P02776 101 aa20.24■□□□□ 0.83
LIMD2-203ENST00000578067 UQCR10Q9UDW1 63 aa20.24■□□□□ 0.83
LIMD2-203ENST00000578067 ZNF415Q09FC8 603 aa20.23■□□□□ 0.83
LIMD2-203ENST00000578067 BEAN1Q3B7T3 259 aa20.23■□□□□ 0.83
LIMD2-203ENST00000578067 FAM110AQ9BQ89 295 aa20.23■□□□□ 0.83
LIMD2-203ENST00000578067 PRM2P04554 102 aa20.22■□□□□ 0.83
LIMD2-203ENST00000578067 ORMDL2Q53FV1 153 aa20.22■□□□□ 0.83
LIMD2-203ENST00000578067 ST20Q9HBF5 79 aa20.22■□□□□ 0.83
LIMD2-203ENST00000578067 XCL2Q9UBD3 114 aa20.22■□□□□ 0.83
LIMD2-203ENST00000578067 hDV102S1A0JD36 115 aa20.22■□□□□ 0.83
LIMD2-203ENST00000578067 HSBP1L1C9JCN9 74 aa20.22■□□□□ 0.83
LIMD2-203ENST00000578067 NUDT3O95989 172 aa20.21■□□□□ 0.83
LIMD2-203ENST00000578067 NUTF2P61970 127 aaKnown RBP20.21■□□□□ 0.83
LIMD2-203ENST00000578067 RPL32P62910 135 aaKnown RBP20.21■□□□□ 0.83
LIMD2-203ENST00000578067 CSTL1Q9H114 145 aa20.21■□□□□ 0.83
LIMD2-203ENST00000578067 ZNF56Q15929 161 aa20.2■□□□□ 0.83
LIMD2-203ENST00000578067 LINC00482Q8N8I6 264 aa20.2■□□□□ 0.83
LIMD2-203ENST00000578067 NSD1Q96L73 2696 aaPredicted RBP20.19■□□□□ 0.82
LIMD2-203ENST00000578067 M0R2P5 195 aa20.19■□□□□ 0.82
LIMD2-203ENST00000578067 ATP5LO75964 103 aa20.19■□□□□ 0.82
LIMD2-203ENST00000578067 GOLT1BQ9Y3E0 138 aa20.19■□□□□ 0.82
LIMD2-203ENST00000578067 PTH2Q96A98 100 aa20.19■□□□□ 0.82
LIMD2-203ENST00000578067 FN1P02751 2386 aaKnown RBP20.18■□□□□ 0.82
LIMD2-203ENST00000578067 PIK3CD-AS1Q5SR53 167 aa20.18■□□□□ 0.82
LIMD2-203ENST00000578067 HIVEP1P15822 2718 aa20.18■□□□□ 0.82
LIMD2-203ENST00000578067 C11orf72Q8NBR9 251 aa20.17■□□□□ 0.82
LIMD2-203ENST00000578067 TMEM208Q9BTX3 173 aa20.17■□□□□ 0.82
LIMD2-203ENST00000578067 C19orf73Q9NVV2 129 aa20.17■□□□□ 0.82
LIMD2-203ENST00000578067 TRBV6-5A0A0K0K1A5 114 aa20.17■□□□□ 0.82
LIMD2-203ENST00000578067 M0QY20 66 aa20.17■□□□□ 0.82
LIMD2-203ENST00000578067 POLR2KP53803 58 aaKnown RBP20.17■□□□□ 0.82
LIMD2-203ENST00000578067 C1orf158Q8N1D5 194 aa20.17■□□□□ 0.82
LIMD2-203ENST00000578067 PRSS1P07477 247 aa20.15■□□□□ 0.82
LIMD2-203ENST00000578067 SPXQ9BT56 116 aa20.15■□□□□ 0.82
LIMD2-203ENST00000578067 Q6ZN92 141 aa20.15■□□□□ 0.82
LIMD2-203ENST00000578067 VCYO14598 125 aa20.14■□□□□ 0.81
LIMD2-203ENST00000578067 A8MWV9 139 aa20.14■□□□□ 0.81
LIMD2-203ENST00000578067 NEGR1Q7Z3B1 354 aa20.14■□□□□ 0.81
LIMD2-203ENST00000578067 TOMM6Q96B49 74 aa20.14■□□□□ 0.81
LIMD2-203ENST00000578067 WFDC10AQ9H1F0 79 aa20.14■□□□□ 0.81
LIMD2-203ENST00000578067 MORN3Q6PF18 240 aaPredicted RBP20.13■□□□□ 0.81
LIMD2-203ENST00000578067 SDHAF1A6NFY7 115 aa20.12■□□□□ 0.81
LIMD2-203ENST00000578067 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.12■□□□□ 0.81
LIMD2-203ENST00000578067 DKK2Q9UBU2 259 aa20.12■□□□□ 0.81
LIMD2-203ENST00000578067 IGHV3OR16-12A0A075B7B8 117 aa20.11■□□□□ 0.81
LIMD2-203ENST00000578067 M0R143 59 aa20.11■□□□□ 0.81
LIMD2-203ENST00000578067 ODF1Q14990 250 aa20.11■□□□□ 0.81
LIMD2-203ENST00000578067 MRPL52Q86TS9 123 aaKnown RBP20.11■□□□□ 0.81
LIMD2-203ENST00000578067 SNHG12Q9BXW3 62 aa20.11■□□□□ 0.81
LIMD2-203ENST00000578067 AZU1P20160 251 aa20.1■□□□□ 0.81
LIMD2-203ENST00000578067 HNRNPA3P51991 378 aaKnown RBP20.1■□□□□ 0.81
LIMD2-203ENST00000578067 KIR2DL4Q99706 377 aa20.1■□□□□ 0.81
LIMD2-203ENST00000578067 TRBV27A0A0K0K1C4 114 aa20.1■□□□□ 0.81
LIMD2-203ENST00000578067 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP20.1■□□□□ 0.81
LIMD2-203ENST00000578067 LBHQ53QV2 105 aaPredicted RBP20.1■□□□□ 0.81
LIMD2-203ENST00000578067 C2orf66Q6UXQ4 117 aa20.1■□□□□ 0.81
LIMD2-203ENST00000578067 C2CD3Q4AC94 2353 aa20.09■□□□□ 0.81
LIMD2-203ENST00000578067 EREGO14944 169 aa20.09■□□□□ 0.81
LIMD2-203ENST00000578067 EDA2RQ9HAV5 297 aa20.09■□□□□ 0.81
LIMD2-203ENST00000578067 UFSP1Q6NVU6 142 aa20.09■□□□□ 0.81
LIMD2-203ENST00000578067 SCGB3A1Q96QR1 104 aa20.09■□□□□ 0.81
LIMD2-203ENST00000578067 H7C1H1 209 aa20.08■□□□□ 0.8
LIMD2-203ENST00000578067 GIG44P09565 113 aaPredicted RBP20.08■□□□□ 0.8
LIMD2-203ENST00000578067 G0S2P27469 103 aa20.08■□□□□ 0.8
LIMD2-203ENST00000578067 RPL35AP18077 110 aaKnown RBP20.07■□□□□ 0.8
LIMD2-203ENST00000578067 ZFP2Q6ZN57 461 aa20.07■□□□□ 0.8
LIMD2-203ENST00000578067 ZMAT4Q9H898 229 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms