RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 IQCJQ1A5X6 159 aa13.39□□□□□ -0.27
PRKCA-203ENST00000578063 JPT2Q9H910 190 aa13.39□□□□□ -0.27
PRKCA-203ENST00000578063 SMIM9A6NGZ8 99 aa13.39□□□□□ -0.27
PRKCA-203ENST00000578063 SMKR1H3BMG3 65 aa13.39□□□□□ -0.27
PRKCA-203ENST00000578063 NCR2O95944 276 aa13.39□□□□□ -0.27
PRKCA-203ENST00000578063 LCE2DQ5TA82 110 aaPredicted RBP13.39□□□□□ -0.27
PRKCA-203ENST00000578063 HIST3H2BBQ8N257 126 aa13.39□□□□□ -0.27
PRKCA-203ENST00000578063 SERF1AO75920 110 aa13.38□□□□□ -0.27
PRKCA-203ENST00000578063 LINC00315P59091 139 aa13.38□□□□□ -0.27
PRKCA-203ENST00000578063 DAZ2Q13117 558 aaKnown RBP13.38□□□□□ -0.27
PRKCA-203ENST00000578063 RASL10AQ92737 203 aa13.38□□□□□ -0.27
PRKCA-203ENST00000578063 A0A087WWL8 130 aa13.37□□□□□ -0.27
PRKCA-203ENST00000578063 ESDP10768 282 aa13.37□□□□□ -0.27
PRKCA-203ENST00000578063 LGALS9BQ3B8N2 356 aa13.37□□□□□ -0.27
PRKCA-203ENST00000578063 MRPL16Q9NX20 251 aaKnown RBP13.37□□□□□ -0.27
PRKCA-203ENST00000578063 PLAC8L1A1L4L8 177 aa13.36□□□□□ -0.27
PRKCA-203ENST00000578063 NPYP01303 97 aa13.36□□□□□ -0.27
PRKCA-203ENST00000578063 CRYGDP07320 174 aa13.36□□□□□ -0.27
PRKCA-203ENST00000578063 S100A2P29034 98 aa13.36□□□□□ -0.27
PRKCA-203ENST00000578063 LINC00310P59036 64 aa13.36□□□□□ -0.27
PRKCA-203ENST00000578063 DEFB135Q30KP9 77 aa13.36□□□□□ -0.27
PRKCA-203ENST00000578063 FAM74A4Q5TZK3 123 aa13.36□□□□□ -0.27
PRKCA-203ENST00000578063 TRAV26-2A0A0B4J265 109 aa13.36□□□□□ -0.27
PRKCA-203ENST00000578063 PDZD11Q5EBL8 140 aa13.36□□□□□ -0.27
PRKCA-203ENST00000578063 Q6ZWC4 215 aa13.36□□□□□ -0.27
PRKCA-203ENST00000578063 SAMD10Q9BYL1 202 aa13.36□□□□□ -0.27
PRKCA-203ENST00000578063 X6R8D5 127 aa13.36□□□□□ -0.27
PRKCA-203ENST00000578063 TRGV1A0A0A0MS02 117 aa13.35□□□□□ -0.27
PRKCA-203ENST00000578063 TNFRSF6BO95407 300 aa13.35□□□□□ -0.27
PRKCA-203ENST00000578063 RHODO00212 210 aa13.34□□□□□ -0.27
PRKCA-203ENST00000578063 GAS8-AS1O95177 125 aa13.34□□□□□ -0.27
PRKCA-203ENST00000578063 PPP1R17O96001 155 aa13.34□□□□□ -0.27
PRKCA-203ENST00000578063 NRACQ8N912 160 aa13.34□□□□□ -0.27
PRKCA-203ENST00000578063 OVOL2Q9BRP0 275 aa13.34□□□□□ -0.27
PRKCA-203ENST00000578063 MAP1LC3AQ9H492 121 aa13.34□□□□□ -0.27
PRKCA-203ENST00000578063 NOP10Q9NPE3 64 aaKnown RBP13.34□□□□□ -0.27
PRKCA-203ENST00000578063 F5H697 171 aa13.33□□□□□ -0.27
PRKCA-203ENST00000578063 ZNF56Q15929 161 aa13.33□□□□□ -0.27
PRKCA-203ENST00000578063 RNASEKQ6P5S7 137 aaKnown RBP13.33□□□□□ -0.27
PRKCA-203ENST00000578063 NIT1Q86X76 327 aa13.33□□□□□ -0.27
PRKCA-203ENST00000578063 CHCHD1Q96BP2 118 aaKnown RBP13.33□□□□□ -0.27
PRKCA-203ENST00000578063 RS1O15537 224 aa13.33□□□□□ -0.28
PRKCA-203ENST00000578063 NUPR1O60356 82 aa13.33□□□□□ -0.28
PRKCA-203ENST00000578063 GATA1P15976 413 aaPredicted RBP13.33□□□□□ -0.28
PRKCA-203ENST00000578063 CFAP126Q5VTH2 177 aa13.33□□□□□ -0.28
PRKCA-203ENST00000578063 SUMO4Q6EEV6 95 aa13.33□□□□□ -0.28
PRKCA-203ENST00000578063 RNF183Q96D59 192 aa13.33□□□□□ -0.28
PRKCA-203ENST00000578063 IFITM10A6NMD0 228 aa13.32□□□□□ -0.28
PRKCA-203ENST00000578063 KPRPQ5T749 579 aaPredicted RBP13.32□□□□□ -0.28
PRKCA-203ENST00000578063 UFSP1Q6NVU6 142 aa13.32□□□□□ -0.28
PRKCA-203ENST00000578063 PRSS3P2Q8NHM4 247 aa13.32□□□□□ -0.28
PRKCA-203ENST00000578063 HSBP1O75506 76 aa13.31□□□□□ -0.28
PRKCA-203ENST00000578063 LINC00614P0C842 121 aa13.31□□□□□ -0.28
PRKCA-203ENST00000578063 Q6ZTI0 123 aa13.31□□□□□ -0.28
PRKCA-203ENST00000578063 OR11H2Q8NH07 326 aa13.31□□□□□ -0.28
PRKCA-203ENST00000578063 TMEM18Q96B42 140 aa13.31□□□□□ -0.28
PRKCA-203ENST00000578063 URB1-AS1Q96HZ7 61 aa13.31□□□□□ -0.28
PRKCA-203ENST00000578063 HIST1H2BLQ99880 126 aa13.31□□□□□ -0.28
PRKCA-203ENST00000578063 LOC389332A0A1B0GUA5 103 aa13.3□□□□□ -0.28
PRKCA-203ENST00000578063 ZFP2Q6ZN57 461 aa13.3□□□□□ -0.28
PRKCA-203ENST00000578063 FA2HQ7L5A8 372 aa13.3□□□□□ -0.28
PRKCA-203ENST00000578063 C20orf78Q9BR46 151 aa13.3□□□□□ -0.28
PRKCA-203ENST00000578063 NXT2Q9NPJ8 142 aaKnown RBP13.3□□□□□ -0.28
PRKCA-203ENST00000578063 DNAH3Q8TD57 4116 aa13.3□□□□□ -0.28
PRKCA-203ENST00000578063 PRSS47A8MTI9 375 aa13.3□□□□□ -0.28
PRKCA-203ENST00000578063 MIFP14174 115 aa13.3□□□□□ -0.28
PRKCA-203ENST00000578063 FABP4P15090 132 aa13.3□□□□□ -0.28
PRKCA-203ENST00000578063 IFI27P40305 119 aaPredicted RBP13.3□□□□□ -0.28
PRKCA-203ENST00000578063 EDA2RQ9HAV5 297 aa13.3□□□□□ -0.28
PRKCA-203ENST00000578063 TRAV4A0A0B4J268 109 aa13.29□□□□□ -0.28
PRKCA-203ENST00000578063 H7C1H1 209 aa13.29□□□□□ -0.28
PRKCA-203ENST00000578063 OR4C5Q8NGB2 326 aa13.29□□□□□ -0.28
PRKCA-203ENST00000578063 RPL39LQ96EH5 51 aaKnown RBP13.29□□□□□ -0.28
PRKCA-203ENST00000578063 PACRGQ96M98 296 aaPredicted RBP13.29□□□□□ -0.28
PRKCA-203ENST00000578063 AP5S1Q9NUS5 200 aa13.29□□□□□ -0.28
PRKCA-203ENST00000578063 TP53TG1Q9Y2A0 90 aa13.29□□□□□ -0.28
PRKCA-203ENST00000578063 M0QY20 66 aa13.28□□□□□ -0.28
PRKCA-203ENST00000578063 PMCHP20382 165 aa13.28□□□□□ -0.28
PRKCA-203ENST00000578063 EMP1P54849 157 aa13.28□□□□□ -0.28
PRKCA-203ENST00000578063 SUMO2P61956 95 aaKnown RBP13.28□□□□□ -0.28
PRKCA-203ENST00000578063 AMTP48728 403 aa13.27□□□□□ -0.28
PRKCA-203ENST00000578063 AKR1D1P51857 326 aa13.27□□□□□ -0.28
PRKCA-203ENST00000578063 IGHV3-73A0A0B4J1V6 119 aa13.27□□□□□ -0.29
PRKCA-203ENST00000578063 CIDEAO60543 219 aa13.27□□□□□ -0.29
PRKCA-203ENST00000578063 KRTAP21-3Q3LHN1 58 aa13.27□□□□□ -0.29
PRKCA-203ENST00000578063 Q8N8P6 123 aa13.27□□□□□ -0.29
PRKCA-203ENST00000578063 TRGV2A0A075B6R0 118 aa13.26□□□□□ -0.29
PRKCA-203ENST00000578063 IGHV4-28A0A0C4DH34 117 aa13.26□□□□□ -0.29
PRKCA-203ENST00000578063 TRBV6-5A0A0K0K1A5 114 aa13.26□□□□□ -0.29
PRKCA-203ENST00000578063 GAGE12BA1L429 117 aa13.26□□□□□ -0.29
PRKCA-203ENST00000578063 GAGE7O76087 117 aa13.26□□□□□ -0.29
PRKCA-203ENST00000578063 GAGE12FP0CL80 117 aa13.26□□□□□ -0.29
PRKCA-203ENST00000578063 GAGE12GP0CL81 117 aa13.26□□□□□ -0.29
PRKCA-203ENST00000578063 GAGE12IP0CL82 117 aa13.26□□□□□ -0.29
PRKCA-203ENST00000578063 SMIM2Q9BVW6 85 aa13.26□□□□□ -0.29
PRKCA-203ENST00000578063 NOTCH1P46531 2555 aa13.26□□□□□ -0.29
PRKCA-203ENST00000578063 MGAM2Q2M2H8 2515 aa13.25□□□□□ -0.29
PRKCA-203ENST00000578063 LYRM9A8MSI8 78 aa13.25□□□□□ -0.29
PRKCA-203ENST00000578063 PRB2P02812 416 aaPredicted RBP13.25□□□□□ -0.29
PRKCA-203ENST00000578063 RPL32P62910 135 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms