RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 ZNF56Q15929 161 aa11.15□□□□□ -0.62
CUEDC1-206ENST00000577830 GAGE13Q4V321 117 aa11.15□□□□□ -0.62
CUEDC1-206ENST00000577830 COX8CQ7Z4L0 72 aa11.15□□□□□ -0.62
CUEDC1-206ENST00000577830 OPRPNQ99935 248 aaPredicted RBP11.15□□□□□ -0.62
CUEDC1-206ENST00000577830 YAE1D1Q9NRH1 226 aa11.15□□□□□ -0.62
CUEDC1-206ENST00000577830 HOXA3O43365 443 aaPredicted RBP11.15□□□□□ -0.62
CUEDC1-206ENST00000577830 ZFAND2AQ8N6M9 145 aa11.15□□□□□ -0.62
CUEDC1-206ENST00000577830 ZMAT4Q9H898 229 aa11.15□□□□□ -0.63
CUEDC1-206ENST00000577830 KLK9Q9UKQ9 250 aa11.15□□□□□ -0.63
CUEDC1-206ENST00000577830 IGHV4-61A0A0C4DH41 118 aa11.14□□□□□ -0.63
CUEDC1-206ENST00000577830 AZU1P20160 251 aa11.14□□□□□ -0.63
CUEDC1-206ENST00000577830 AJUBAQ96IF1 538 aa11.14□□□□□ -0.63
CUEDC1-206ENST00000577830 GEMIN7Q9H840 131 aaKnown RBP11.14□□□□□ -0.63
CUEDC1-206ENST00000577830 BAALCQ8WXS3 180 aa11.14□□□□□ -0.63
CUEDC1-206ENST00000577830 PSMG4Q5JS54 123 aa11.14□□□□□ -0.63
CUEDC1-206ENST00000577830 C10orf99Q6UWK7 81 aa11.13□□□□□ -0.63
CUEDC1-206ENST00000577830 FOXI2Q6ZQN5 318 aa11.13□□□□□ -0.63
CUEDC1-206ENST00000577830 NRGNQ92686 78 aa11.13□□□□□ -0.63
CUEDC1-206ENST00000577830 PTH2Q96A98 100 aa11.13□□□□□ -0.63
CUEDC1-206ENST00000577830 HIGD1BQ9P298 99 aa11.13□□□□□ -0.63
CUEDC1-206ENST00000577830 MRAP2Q96G30 205 aa11.13□□□□□ -0.63
CUEDC1-206ENST00000577830 IGHV4-39P01824 125 aa11.12□□□□□ -0.63
CUEDC1-206ENST00000577830 LGALS1P09382 135 aaKnown RBP11.12□□□□□ -0.63
CUEDC1-206ENST00000577830 HIST2H2BDQ6DRA6 164 aa11.12□□□□□ -0.63
CUEDC1-206ENST00000577830 ABCA2Q9BZC7 2435 aa11.12□□□□□ -0.63
CUEDC1-206ENST00000577830 TMEM190Q8WZ59 177 aa11.12□□□□□ -0.63
CUEDC1-206ENST00000577830 GPHB5Q86YW7 130 aa11.11□□□□□ -0.63
CUEDC1-206ENST00000577830 ITLN2Q8WWU7 325 aaPredicted RBP11.11□□□□□ -0.63
CUEDC1-206ENST00000577830 IGHV1-69DA0A0B4J2H0 117 aa11.11□□□□□ -0.63
CUEDC1-206ENST00000577830 IGHV1-69P01742 117 aa11.11□□□□□ -0.63
CUEDC1-206ENST00000577830 ZFP2Q6ZN57 461 aa11.11□□□□□ -0.63
CUEDC1-206ENST00000577830 TM2D2Q9BX73 214 aa11.11□□□□□ -0.63
CUEDC1-206ENST00000577830 C11orf86A6NJI1 115 aa11.11□□□□□ -0.63
CUEDC1-206ENST00000577830 OVOL1O14753 267 aa11.11□□□□□ -0.63
CUEDC1-206ENST00000577830 PHLDA1Q8WV24 401 aaPredicted RBP11.11□□□□□ -0.63
CUEDC1-206ENST00000577830 KIR2DL4Q99706 377 aa11.11□□□□□ -0.63
CUEDC1-206ENST00000577830 BEX4Q9NWD9 120 aaPredicted RBP11.11□□□□□ -0.63
CUEDC1-206ENST00000577830 SRSF2Q01130 221 aaKnown RBP11.1□□□□□ -0.63
CUEDC1-206ENST00000577830 RRN3P1Q2M238 152 aa11.1□□□□□ -0.63
CUEDC1-206ENST00000577830 RAX2Q96IS3 184 aa11.1□□□□□ -0.63
CUEDC1-206ENST00000577830 E9PLD3 99 aa11.1□□□□□ -0.63
CUEDC1-206ENST00000577830 SPINK13Q1W4C9 94 aa11.1□□□□□ -0.63
CUEDC1-206ENST00000577830 ADARB2-AS1A8MUL3 147 aa11.1□□□□□ -0.63
CUEDC1-206ENST00000577830 RNASE13Q5GAN3 156 aaKnown RBP11.1□□□□□ -0.63
CUEDC1-206ENST00000577830 SIGMAR1Q99720 223 aa11.1□□□□□ -0.63
CUEDC1-206ENST00000577830 PRM2P04554 102 aa11.09□□□□□ -0.63
CUEDC1-206ENST00000577830 RNASE3P12724 160 aaKnown RBP11.09□□□□□ -0.63
CUEDC1-206ENST00000577830 MRPL23Q16540 153 aaKnown RBP11.09□□□□□ -0.63
CUEDC1-206ENST00000577830 TOMM6Q96B49 74 aa11.09□□□□□ -0.63
CUEDC1-206ENST00000577830 SPAG8Q99932 426 aaPredicted RBP11.09□□□□□ -0.63
CUEDC1-206ENST00000577830 NAV2Q8IVL1 2488 aa11.09□□□□□ -0.63
CUEDC1-206ENST00000577830 SDHAF1A6NFY7 115 aa11.09□□□□□ -0.63
CUEDC1-206ENST00000577830 CKS1BP61024 79 aa11.09□□□□□ -0.63
CUEDC1-206ENST00000577830 GAGE12HA6NDE8 117 aa11.09□□□□□ -0.63
CUEDC1-206ENST00000577830 PRB1P04280 392 aa11.09□□□□□ -0.63
CUEDC1-206ENST00000577830 Q1RN00 199 aa11.09□□□□□ -0.63
CUEDC1-206ENST00000577830 NEXN-AS1Q8NBZ9 246 aa11.09□□□□□ -0.63
CUEDC1-206ENST00000577830 PRORYQ9H606 182 aa11.09□□□□□ -0.63
CUEDC1-206ENST00000577830 MDFICQ9P1T7 246 aa11.09□□□□□ -0.63
CUEDC1-206ENST00000577830 FAM223BA6NKX1 122 aa11.08□□□□□ -0.64
CUEDC1-206ENST00000577830 FAM223AQ8IWN6 122 aa11.08□□□□□ -0.64
CUEDC1-206ENST00000577830 DOPEY1Q5JWR5 2465 aa11.08□□□□□ -0.64
CUEDC1-206ENST00000577830 MUC4Q99102 2169 aa11.08□□□□□ -0.64
CUEDC1-206ENST00000577830 CSMD2Q7Z408 3487 aa11.08□□□□□ -0.64
CUEDC1-206ENST00000577830 KNCNA6PVL3 124 aa11.08□□□□□ -0.64
CUEDC1-206ENST00000577830 NPC2P61916 151 aa11.08□□□□□ -0.64
CUEDC1-206ENST00000577830 KHDC1LQ5JSQ8 128 aa11.08□□□□□ -0.64
CUEDC1-206ENST00000577830 SUMO4Q6EEV6 95 aa11.08□□□□□ -0.64
CUEDC1-206ENST00000577830 PSMG3-AS1Q96PY0 264 aa11.08□□□□□ -0.64
CUEDC1-206ENST00000577830 TRBV7-9A0A0J9YWB2 115 aa11.08□□□□□ -0.64
CUEDC1-206ENST00000577830 HERVK_113P61574 105 aa11.08□□□□□ -0.64
CUEDC1-206ENST00000577830 NDUFA4O00483 81 aa11.07□□□□□ -0.64
CUEDC1-206ENST00000577830 C20orf78Q9BR46 151 aa11.07□□□□□ -0.64
CUEDC1-206ENST00000577830 SPANXB1Q9NS25 103 aaPredicted RBP11.07□□□□□ -0.64
CUEDC1-206ENST00000577830 PIFOQ8TCI5 191 aa11.07□□□□□ -0.64
CUEDC1-206ENST00000577830 CCL19Q99731 98 aa11.07□□□□□ -0.64
CUEDC1-206ENST00000577830 JMJD1CQ15652 2540 aa11.07□□□□□ -0.64
CUEDC1-206ENST00000577830 TRAV2A0A0B4J234 112 aa11.07□□□□□ -0.64
CUEDC1-206ENST00000577830 DAZ1Q9NQZ3 744 aaKnown RBP11.07□□□□□ -0.64
CUEDC1-206ENST00000577830 PRSS2P07478 247 aa11.06□□□□□ -0.64
CUEDC1-206ENST00000577830 U3KQE9 123 aa11.06□□□□□ -0.64
CUEDC1-206ENST00000577830 MRPL53Q96EL3 112 aaKnown RBP11.06□□□□□ -0.64
CUEDC1-206ENST00000577830 TRBV7-3A0A075B6L6 115 aa11.05□□□□□ -0.64
CUEDC1-206ENST00000577830 IGHV4-30-2A0A087WSY4 118 aa11.05□□□□□ -0.64
CUEDC1-206ENST00000577830 LGALS3P17931 250 aaKnown RBP11.05□□□□□ -0.64
CUEDC1-206ENST00000577830 F8W1H4 67 aa11.05□□□□□ -0.64
CUEDC1-206ENST00000577830 SYNJ2BPP57105 145 aa11.05□□□□□ -0.64
CUEDC1-206ENST00000577830 SYT8Q8NBV8 401 aa11.03□□□□□ -0.64
CUEDC1-206ENST00000577830 USP24Q9UPU5 2620 aa11.03□□□□□ -0.64
CUEDC1-206ENST00000577830 IGHV4-59P01825 116 aa11.03□□□□□ -0.64
CUEDC1-206ENST00000577830 P0DMU3 169 aa11.03□□□□□ -0.64
CUEDC1-206ENST00000577830 FAM231AP0DMU4 169 aa11.03□□□□□ -0.64
CUEDC1-206ENST00000577830 FAM231CP0DMU5 169 aa11.03□□□□□ -0.64
CUEDC1-206ENST00000577830 MORN3Q6PF18 240 aaPredicted RBP11.03□□□□□ -0.64
CUEDC1-206ENST00000577830 CEMP1Q6PRD7 247 aaPredicted RBP11.03□□□□□ -0.64
CUEDC1-206ENST00000577830 TRAV12-1A0A0B4J245 112 aa11.03□□□□□ -0.64
CUEDC1-206ENST00000577830 LINC01546A6NGU7 62 aa11.03□□□□□ -0.64
CUEDC1-206ENST00000577830 ZNF876PQ49A33 203 aa11.03□□□□□ -0.64
CUEDC1-206ENST00000577830 ANKRD17O75179 2603 aaKnown RBP11.02□□□□□ -0.64
CUEDC1-206ENST00000577830 VCYO14598 125 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms