RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 CAMSAP2Q08AD1 1489 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 CUBNO60494 3623 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 UHRF1BP1Q6BDS2 1440 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 LAMA3Q16787 3333 aa-0.82□□□□□ -2.54
CDH8-204ENST00000577536 DSPP15924 2871 aaKnown RBP-0.82□□□□□ -2.54
CDH8-204ENST00000577536 ERCC6L2Q5T890 1561 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 DNAH9Q9NYC9 4486 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 ZZEF1O43149 2961 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.83□□□□□ -2.54
CDH8-204ENST00000577536 WDR87Q6ZQQ6 2873 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 ZNF142P52746 1687 aaPredicted RBP-0.83□□□□□ -2.54
CDH8-204ENST00000577536 TRAV1-2A0A0B4J238 106 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 A0A1B0GW64 132 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 H0YJX3 145 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 M0QX08 132 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 S100A6P06703 90 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 SMIM6P0DI80 62 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 CKS2P33552 79 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 EDDM3BP56851 147 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 MRPS15P82914 257 aaKnown RBP-0.83□□□□□ -2.54
CDH8-204ENST00000577536 CFAP126Q5VTH2 177 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 CROCCP2Q86T23 111 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 TEX29Q8N6K0 151 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 IFI27L1Q96BM0 104 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 SIGMAR1Q99720 223 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 AGPAT4-IT1Q9H0P7 198 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 NPVFQ9HCQ7 196 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.83□□□□□ -2.54
CDH8-204ENST00000577536 LAMTOR3Q9UHA4 124 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 ERG28Q9UKR5 140 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 NUBP2Q9Y5Y2 271 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 PHIPQ8WWQ0 1821 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 TEX15Q9BXT5 2789 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 CD109Q6YHK3 1445 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 ACACAQ13085 2346 aa-0.83□□□□□ -2.54
CDH8-204ENST00000577536 DMXL1Q9Y485 3027 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 LRP5O75197 1615 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 LRP6O75581 1613 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 PAPPAQ13219 1627 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 TRBV27A0A0K0K1C4 114 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 PNMA8CA0A1B0GUJ8 204 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 MAP1LC3B2A6NCE7 125 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 SMIM23A6NLE4 172 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 H7C1C5 153 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 J3KT08 172 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 TFF1P04155 84 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 FABP2P12104 132 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 SLC25A6P12236 298 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 SRP9P49458 86 aaKnown RBP-0.84□□□□□ -2.54
CDH8-204ENST00000577536 AKR1D1P51857 326 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 ERVS71-1P61550 626 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 ARF6P62330 175 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 LCN6P62502 163 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 RPL19P84098 196 aaKnown RBP-0.84□□□□□ -2.54
CDH8-204ENST00000577536 LIN52Q52LA3 116 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 AKR1C8PQ5T2L2 129 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 SLC25A26Q70HW3 274 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 BAGE3Q86Y29 109 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 DEFB123Q8N688 67 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 OR8J2Q8NGG1 315 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 PAIP2Q9BPZ3 127 aaKnown RBP-0.84□□□□□ -2.54
CDH8-204ENST00000577536 LRTM1Q9HBL6 345 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 OTORQ9NRC9 128 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 TAS2R8Q9NYW2 309 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 FAM32AQ9Y421 112 aaKnown RBP-0.84□□□□□ -2.54
CDH8-204ENST00000577536 CASKIN1Q8WXD9 1431 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 TRAPPC8Q9Y2L5 1435 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 KALRNO60229 2985 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 DLC1Q96QB1 1528 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 KNL1Q8NG31 2342 aa-0.84□□□□□ -2.54
CDH8-204ENST00000577536 ANK3Q12955 4377 aaKnown RBP-0.85□□□□□ -2.54
CDH8-204ENST00000577536 KIF13AQ9H1H9 1805 aa-0.85□□□□□ -2.54
CDH8-204ENST00000577536 MYH1P12882 1939 aa-0.85□□□□□ -2.55
CDH8-204ENST00000577536 CCDC144AA2RUR9 1427 aa-0.85□□□□□ -2.55
CDH8-204ENST00000577536 G3V2T6 193 aa-0.85□□□□□ -2.55
CDH8-204ENST00000577536 CCDC179H3BU77 68 aa-0.85□□□□□ -2.55
CDH8-204ENST00000577536 RPP14O95059 124 aaKnown RBP-0.85□□□□□ -2.55
CDH8-204ENST00000577536 NCR2O95944 276 aa-0.85□□□□□ -2.55
CDH8-204ENST00000577536 PPP1R2P41236 205 aa-0.85□□□□□ -2.55
CDH8-204ENST00000577536 NPC2P61916 151 aa-0.85□□□□□ -2.55
CDH8-204ENST00000577536 GNG5P63218 68 aa-0.85□□□□□ -2.55
CDH8-204ENST00000577536 TPM4P67936 248 aa-0.85□□□□□ -2.55
CDH8-204ENST00000577536 MT1HP80294 61 aa-0.85□□□□□ -2.55
CDH8-204ENST00000577536 DEFA5Q01523 94 aa-0.85□□□□□ -2.55
CDH8-204ENST00000577536 PLGLB1Q02325 96 aa-0.85□□□□□ -2.55
CDH8-204ENST00000577536 SPCS2Q15005 226 aa-0.85□□□□□ -2.55
CDH8-204ENST00000577536 C9orf62Q8N4C0 152 aa-0.85□□□□□ -2.55
CDH8-204ENST00000577536 OR51A4Q8NGJ6 313 aa-0.85□□□□□ -2.55
CDH8-204ENST00000577536 OTOSQ8NHW6 89 aa-0.85□□□□□ -2.55
CDH8-204ENST00000577536 BORCS8Q96FH0 119 aa-0.85□□□□□ -2.55
CDH8-204ENST00000577536 LLPHQ9BRT6 129 aaKnown RBP-0.85□□□□□ -2.55
CDH8-204ENST00000577536 SH3BGRL3Q9H299 93 aa-0.85□□□□□ -2.55
CDH8-204ENST00000577536 PRNDQ9UKY0 176 aa-0.85□□□□□ -2.55
CDH8-204ENST00000577536 SSR3Q9UNL2 185 aa-0.85□□□□□ -2.55
CDH8-204ENST00000577536 NDUFAF1Q9Y375 327 aa-0.85□□□□□ -2.55
CDH8-204ENST00000577536 PARP14Q460N5 1801 aa-0.85□□□□□ -2.55
CDH8-204ENST00000577536 NRXN2Q9P2S2 1712 aa-0.86□□□□□ -2.55
CDH8-204ENST00000577536 MGAM2Q2M2H8 2515 aa-0.86□□□□□ -2.55
CDH8-204ENST00000577536 NSD3Q9BZ95 1437 aa-0.86□□□□□ -2.55
CDH8-204ENST00000577536 XIRP1Q702N8 1843 aaKnown RBP-0.86□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms