RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 LINC01620Q4KN68 170 aa10.03□□□□□ -0.8
CTNS-209ENST00000574776 Q6ZSA8 131 aa10.03□□□□□ -0.8
CTNS-209ENST00000574776 OR11H4Q8NGC9 324 aa10.03□□□□□ -0.8
CTNS-209ENST00000574776 NKX6-2Q9C056 277 aaPredicted RBP10.03□□□□□ -0.8
CTNS-209ENST00000574776 ZFP30Q9Y2G7 519 aa10.03□□□□□ -0.8
CTNS-209ENST00000574776 URGCP-MRPS24S4R325 110 aa10.03□□□□□ -0.8
CTNS-209ENST00000574776 TMSB15BA0A087X1C1 80 aa10.02□□□□□ -0.81
CTNS-209ENST00000574776 J3QL48 77 aa10.02□□□□□ -0.81
CTNS-209ENST00000574776 RHODO00212 210 aa10.02□□□□□ -0.81
CTNS-209ENST00000574776 AKR1C8PQ5T2L2 129 aa10.02□□□□□ -0.81
CTNS-209ENST00000574776 NIT1Q86X76 327 aa10.02□□□□□ -0.81
CTNS-209ENST00000574776 SFRP2Q96HF1 295 aa10.02□□□□□ -0.81
CTNS-209ENST00000574776 KLK12Q9UKR0 248 aa10.02□□□□□ -0.81
CTNS-209ENST00000574776 PHLDA3Q9Y5J5 127 aa10.02□□□□□ -0.81
CTNS-209ENST00000574776 COX11Q9Y6N1 276 aa10.02□□□□□ -0.81
CTNS-209ENST00000574776 IGKV2D-24A0A075B6R9 120 aa10.01□□□□□ -0.81
CTNS-209ENST00000574776 M0R381 172 aa10.01□□□□□ -0.81
CTNS-209ENST00000574776 PLA2G1BP04054 148 aaKnown RBP10.01□□□□□ -0.81
CTNS-209ENST00000574776 TPT1P13693 172 aaKnown RBP10.01□□□□□ -0.81
CTNS-209ENST00000574776 FAM162BQ5T6X4 162 aa10.01□□□□□ -0.81
CTNS-209ENST00000574776 COX8CQ7Z4L0 72 aa10.01□□□□□ -0.81
CTNS-209ENST00000574776 RBFOX3A6NFN3 312 aa10□□□□□ -0.81
CTNS-209ENST00000574776 UBE2G1P62253 170 aa10□□□□□ -0.81
CTNS-209ENST00000574776 ZNF674Q2M3X9 581 aa10□□□□□ -0.81
CTNS-209ENST00000574776 LINC00528Q8N1L1 170 aa10□□□□□ -0.81
CTNS-209ENST00000574776 Q8N976 141 aa10□□□□□ -0.81
CTNS-209ENST00000574776 RMI2Q96E14 147 aa10□□□□□ -0.81
CTNS-209ENST00000574776 FMC1Q96HJ9 113 aa10□□□□□ -0.81
CTNS-209ENST00000574776 MAP1LC3B2A6NCE7 125 aa9.99□□□□□ -0.81
CTNS-209ENST00000574776 CST9LP1Q5W188 147 aa9.99□□□□□ -0.81
CTNS-209ENST00000574776 UBE2WQ96B02 151 aa9.99□□□□□ -0.81
CTNS-209ENST00000574776 MAP1LC3BQ9GZQ8 125 aa9.99□□□□□ -0.81
CTNS-209ENST00000574776 A0A087WX48 190 aa9.98□□□□□ -0.81
CTNS-209ENST00000574776 SEC11BP0C7V7 166 aa9.98□□□□□ -0.81
CTNS-209ENST00000574776 LINC01559Q495D7 138 aa9.98□□□□□ -0.81
CTNS-209ENST00000574776 BATF3Q9NR55 127 aa9.98□□□□□ -0.81
CTNS-209ENST00000574776 CYTL1Q9NRR1 136 aa9.98□□□□□ -0.81
CTNS-209ENST00000574776 TRBV6-1A0A0K0K1D8 114 aa9.97□□□□□ -0.81
CTNS-209ENST00000574776 LTAP01374 205 aa9.97□□□□□ -0.81
CTNS-209ENST00000574776 UBE2D3P61077 147 aa9.97□□□□□ -0.81
CTNS-209ENST00000574776 UBE2D2P62837 147 aa9.97□□□□□ -0.81
CTNS-209ENST00000574776 RPL36AP83881 106 aaKnown RBP9.97□□□□□ -0.81
CTNS-209ENST00000574776 SCXQ7RTU7 201 aa9.97□□□□□ -0.81
CTNS-209ENST00000574776 ZFP82Q8N141 532 aa9.97□□□□□ -0.81
CTNS-209ENST00000574776 RPL36ALQ969Q0 106 aaKnown RBP9.97□□□□□ -0.81
CTNS-209ENST00000574776 TRBV7-3A0A075B6L6 115 aa9.96□□□□□ -0.82
CTNS-209ENST00000574776 TRBV10-1A0A0K0K1A3 114 aa9.96□□□□□ -0.82
CTNS-209ENST00000574776 TMEM262E9PQX1 116 aa9.96□□□□□ -0.82
CTNS-209ENST00000574776 G3V3Q6 166 aa9.96□□□□□ -0.82
CTNS-209ENST00000574776 FHITP49789 147 aa9.96□□□□□ -0.82
CTNS-209ENST00000574776 ELOBQ15370 118 aa9.96□□□□□ -0.82
CTNS-209ENST00000574776 KCNIP4Q6PIL6 250 aa9.96□□□□□ -0.82
CTNS-209ENST00000574776 STOML3Q8TAV4 291 aa9.96□□□□□ -0.82
CTNS-209ENST00000574776 ARPC5O15511 151 aa9.95□□□□□ -0.82
CTNS-209ENST00000574776 PAGE4O60829 102 aa9.95□□□□□ -0.82
CTNS-209ENST00000574776 AKR1C3P42330 323 aa9.95□□□□□ -0.82
CTNS-209ENST00000574776 DEFB104AQ8WTQ1 72 aa9.95□□□□□ -0.82
CTNS-209ENST00000574776 CHCHD7Q9BUK0 85 aa9.95□□□□□ -0.82
CTNS-209ENST00000574776 KRTAP29-1A8MX34 341 aaPredicted RBP9.94□□□□□ -0.82
CTNS-209ENST00000574776 RPL19P84098 196 aaKnown RBP9.94□□□□□ -0.82
CTNS-209ENST00000574776 TCEAL7Q9BRU2 100 aa9.94□□□□□ -0.82
CTNS-209ENST00000574776 CHAC1Q9BUX1 264 aa9.94□□□□□ -0.82
CTNS-209ENST00000574776 TRBV6-8A0A0A6YYG3 113 aa9.93□□□□□ -0.82
CTNS-209ENST00000574776 RAB4BP61018 213 aa9.93□□□□□ -0.82
CTNS-209ENST00000574776 Q0VG73 95 aa9.93□□□□□ -0.82
CTNS-209ENST00000574776 ATRAIDQ6UW56 229 aa9.93□□□□□ -0.82
CTNS-209ENST00000574776 ENHOQ6UWT2 76 aa9.93□□□□□ -0.82
CTNS-209ENST00000574776 OR10G8Q8NGN5 311 aa9.93□□□□□ -0.82
CTNS-209ENST00000574776 MUC21A0A0G2JKD1 596 aa9.92□□□□□ -0.82
CTNS-209ENST00000574776 MUC21A0A140T8X8 626 aa9.92□□□□□ -0.82
CTNS-209ENST00000574776 SSTP61278 116 aa9.92□□□□□ -0.82
CTNS-209ENST00000574776 ZNF56Q15929 161 aa9.92□□□□□ -0.82
CTNS-209ENST00000574776 C15orf54Q8N8G6 183 aa9.92□□□□□ -0.82
CTNS-209ENST00000574776 NEXN-AS1Q8NBZ9 246 aa9.92□□□□□ -0.82
CTNS-209ENST00000574776 OR10AG1Q8NH19 301 aa9.92□□□□□ -0.82
CTNS-209ENST00000574776 CIRBP-AS1Q8TBR5 109 aa9.92□□□□□ -0.82
CTNS-209ENST00000574776 SFT2D1Q8WV19 159 aa9.92□□□□□ -0.82
CTNS-209ENST00000574776 C1orf43Q9BWL3 253 aa9.92□□□□□ -0.82
CTNS-209ENST00000574776 A0A1B0GV50 99 aa9.91□□□□□ -0.82
CTNS-209ENST00000574776 SMLR1H3BR10 107 aa9.91□□□□□ -0.82
CTNS-209ENST00000574776 S100A9P06702 114 aaKnown RBP9.91□□□□□ -0.82
CTNS-209ENST00000574776 ZNF471Q9BX82 626 aaPredicted RBP9.91□□□□□ -0.82
CTNS-209ENST00000574776 SCO2A0A1W2PP80 73 aa9.9□□□□□ -0.82
CTNS-209ENST00000574776 F5H697 171 aa9.9□□□□□ -0.82
CTNS-209ENST00000574776 MPV17L2Q567V2 206 aa9.9□□□□□ -0.82
CTNS-209ENST00000574776 PRR27Q6MZM9 219 aa9.9□□□□□ -0.82
CTNS-209ENST00000574776 BAGE2Q86Y30 109 aa9.9□□□□□ -0.82
CTNS-209ENST00000574776 MBD3L1Q8WWY6 194 aa9.9□□□□□ -0.82
CTNS-209ENST00000574776 MLST8Q9BVC4 326 aa9.9□□□□□ -0.82
CTNS-209ENST00000574776 CRPP02741 224 aa9.89□□□□□ -0.83
CTNS-209ENST00000574776 ANGP03950 147 aaKnown RBP9.89□□□□□ -0.83
CTNS-209ENST00000574776 KRTAP10-4P60372 401 aaPredicted RBP9.89□□□□□ -0.83
CTNS-209ENST00000574776 C14orf177Q52M58 125 aa9.89□□□□□ -0.83
CTNS-209ENST00000574776 FAM213BQ8TBF2 198 aa9.89□□□□□ -0.83
CTNS-209ENST00000574776 CHCHD5Q9BSY4 110 aa9.89□□□□□ -0.83
CTNS-209ENST00000574776 SSBP4Q9BWG4 385 aaPredicted RBP9.89□□□□□ -0.83
CTNS-209ENST00000574776 SNAI2O43623 268 aa9.88□□□□□ -0.83
CTNS-209ENST00000574776 CXCL1P09341 107 aa9.88□□□□□ -0.83
CTNS-209ENST00000574776 SPANXN1Q5VSR9 72 aa9.88□□□□□ -0.83
CTNS-209ENST00000574776 TMUB2Q71RG4 321 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms