RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 TOR2AQ5JU69 321 aa6.73□□□□□ -1.33
NDE1-210ENST00000574163 SLC25A29Q8N8R3 303 aa6.73□□□□□ -1.33
NDE1-210ENST00000574163 DAZAP1Q96EP5 407 aaKnown RBP6.73□□□□□ -1.33
NDE1-210ENST00000574163 SFRP2Q96HF1 295 aa6.73□□□□□ -1.33
NDE1-210ENST00000574163 FAM210AQ96ND0 272 aa6.73□□□□□ -1.33
NDE1-210ENST00000574163 M0R2N4 97 aa6.72□□□□□ -1.33
NDE1-210ENST00000574163 M0R381 172 aa6.72□□□□□ -1.33
NDE1-210ENST00000574163 P01737 135 aa6.72□□□□□ -1.33
NDE1-210ENST00000574163 LINC00694P0DN24 101 aa6.72□□□□□ -1.33
NDE1-210ENST00000574163 C1orf134Q5TEV5 83 aa6.72□□□□□ -1.33
NDE1-210ENST00000574163 TEX261Q6UWH6 196 aa6.72□□□□□ -1.33
NDE1-210ENST00000574163 OR10AG1Q8NH19 301 aa6.72□□□□□ -1.33
NDE1-210ENST00000574163 Q9H8V8 135 aa6.72□□□□□ -1.33
NDE1-210ENST00000574163 LY96Q9Y6Y9 160 aa6.72□□□□□ -1.33
NDE1-210ENST00000574163 LOC100131303A0A0U1RQF7 123 aa6.71□□□□□ -1.34
NDE1-210ENST00000574163 K7EP13 123 aa6.71□□□□□ -1.34
NDE1-210ENST00000574163 RTL8CO15255 209 aa6.71□□□□□ -1.34
NDE1-210ENST00000574163 SIVA1O15304 175 aa6.71□□□□□ -1.34
NDE1-210ENST00000574163 IGLC6P0CF74 106 aa6.71□□□□□ -1.34
NDE1-210ENST00000574163 LYPD5Q6UWN5 251 aa6.71□□□□□ -1.34
NDE1-210ENST00000574163 OR2D3Q8NGH3 330 aa6.71□□□□□ -1.34
NDE1-210ENST00000574163 IGHV3-73A0A0B4J1V6 119 aa6.7□□□□□ -1.34
NDE1-210ENST00000574163 TRBV10-1A0A0K0K1A3 114 aa6.7□□□□□ -1.34
NDE1-210ENST00000574163 F2Z2F3 143 aa6.7□□□□□ -1.34
NDE1-210ENST00000574163 CRYGDP07320 174 aa6.7□□□□□ -1.34
NDE1-210ENST00000574163 ANKRD39Q53RE8 183 aa6.7□□□□□ -1.34
NDE1-210ENST00000574163 SPANXN1Q5VSR9 72 aa6.7□□□□□ -1.34
NDE1-210ENST00000574163 C6orf223Q8N319 242 aa6.7□□□□□ -1.34
NDE1-210ENST00000574163 FER1L6-AS1Q8NA97 138 aa6.7□□□□□ -1.34
NDE1-210ENST00000574163 AP1S3Q96PC3 154 aa6.7□□□□□ -1.34
NDE1-210ENST00000574163 SAMD10Q9BYL1 202 aa6.7□□□□□ -1.34
NDE1-210ENST00000574163 EIF5A2Q9GZV4 153 aaKnown RBP6.7□□□□□ -1.34
NDE1-210ENST00000574163 JPT2Q9H910 190 aa6.7□□□□□ -1.34
NDE1-210ENST00000574163 K7EN84 100 aa6.69□□□□□ -1.34
NDE1-210ENST00000574163 CTRLP40313 264 aa6.69□□□□□ -1.34
NDE1-210ENST00000574163 CACNG7P62955 275 aa6.69□□□□□ -1.34
NDE1-210ENST00000574163 FAM74A4Q5TZK3 123 aa6.69□□□□□ -1.34
NDE1-210ENST00000574163 Q6ZSN1 163 aa6.69□□□□□ -1.34
NDE1-210ENST00000574163 SMIM7Q9BQ49 75 aa6.69□□□□□ -1.34
NDE1-210ENST00000574163 KRTAP1-5Q9BYS1 174 aa6.69□□□□□ -1.34
NDE1-210ENST00000574163 RPP21Q9H633 154 aaKnown RBP6.69□□□□□ -1.34
NDE1-210ENST00000574163 FAT2Q9NYQ8 4349 aa6.68□□□□□ -1.34
NDE1-210ENST00000574163 EPPK1P58107 5090 aaKnown RBP6.68□□□□□ -1.34
NDE1-210ENST00000574163 A0A087WWL8 130 aa6.68□□□□□ -1.34
NDE1-210ENST00000574163 DNAH10OSP0CZ25 163 aa6.68□□□□□ -1.34
NDE1-210ENST00000574163 RAB4BP61018 213 aa6.68□□□□□ -1.34
NDE1-210ENST00000574163 CT83Q5H943 113 aa6.68□□□□□ -1.34
NDE1-210ENST00000574163 LELP1Q5T871 98 aa6.68□□□□□ -1.34
NDE1-210ENST00000574163 WDR73Q6P4I2 378 aa6.68□□□□□ -1.34
NDE1-210ENST00000574163 FAM231DQ6ZW35 169 aa6.68□□□□□ -1.34
NDE1-210ENST00000574163 C14orf178Q8N769 122 aaPredicted RBP6.68□□□□□ -1.34
NDE1-210ENST00000574163 NUDT10Q8NFP7 164 aa6.68□□□□□ -1.34
NDE1-210ENST00000574163 ATP6V0E2Q8NHE4 81 aa6.68□□□□□ -1.34
NDE1-210ENST00000574163 OCC1Q8TAD7 63 aa6.68□□□□□ -1.34
NDE1-210ENST00000574163 NUDT11Q96G61 164 aa6.68□□□□□ -1.34
NDE1-210ENST00000574163 CNFNQ9BYD5 112 aa6.68□□□□□ -1.34
NDE1-210ENST00000574163 GTSF1LQ9H1H1 148 aa6.68□□□□□ -1.34
NDE1-210ENST00000574163 SMDT1Q9H4I9 107 aa6.68□□□□□ -1.34
NDE1-210ENST00000574163 DNAH2Q9P225 4427 aa6.67□□□□□ -1.34
NDE1-210ENST00000574163 TRAV9-2A0A087WT02 112 aa6.67□□□□□ -1.34
NDE1-210ENST00000574163 A0A087WWC5 75 aa6.67□□□□□ -1.34
NDE1-210ENST00000574163 PRSS29PA6NIE9 313 aa6.67□□□□□ -1.34
NDE1-210ENST00000574163 SRP19P09132 144 aaKnown RBP6.67□□□□□ -1.34
NDE1-210ENST00000574163 GZMBP10144 247 aa6.67□□□□□ -1.34
NDE1-210ENST00000574163 FAM74A3Q4VXF1 159 aa6.67□□□□□ -1.34
NDE1-210ENST00000574163 LINC01556Q5JQF7 62 aa6.67□□□□□ -1.34
NDE1-210ENST00000574163 WFDC10BQ8IUB3 73 aa6.67□□□□□ -1.34
NDE1-210ENST00000574163 C10orf126Q8N4M7 172 aa6.67□□□□□ -1.34
NDE1-210ENST00000574163 OR10G8Q8NGN5 311 aa6.67□□□□□ -1.34
NDE1-210ENST00000574163 TPPP3Q9BW30 176 aa6.67□□□□□ -1.34
NDE1-210ENST00000574163 DNAH17Q9UFH2 4485 aa6.67□□□□□ -1.34
NDE1-210ENST00000574163 PKHD1P08F94 4074 aa6.67□□□□□ -1.34
NDE1-210ENST00000574163 TRAV8-6A0A0B4J262 113 aa6.66□□□□□ -1.34
NDE1-210ENST00000574163 A0A1B0GVY2 172 aa6.66□□□□□ -1.34
NDE1-210ENST00000574163 GAGE12JA6NER3 117 aa6.66□□□□□ -1.34
NDE1-210ENST00000574163 ZNF727A8MUV8 499 aa6.66□□□□□ -1.34
NDE1-210ENST00000574163 TRGC1P0CF51 173 aa6.66□□□□□ -1.34
NDE1-210ENST00000574163 SMIM17P0DL12 118 aa6.66□□□□□ -1.34
NDE1-210ENST00000574163 EVI2AP22794 236 aa6.66□□□□□ -1.34
NDE1-210ENST00000574163 CEBPGP53567 150 aa6.66□□□□□ -1.34
NDE1-210ENST00000574163 RPL36AP83881 106 aaKnown RBP6.66□□□□□ -1.34
NDE1-210ENST00000574163 GAGE1Q13065 139 aa6.66□□□□□ -1.34
NDE1-210ENST00000574163 GAGE4Q13068 117 aa6.66□□□□□ -1.34
NDE1-210ENST00000574163 GAGE5Q13069 117 aa6.66□□□□□ -1.34
NDE1-210ENST00000574163 PEA15Q15121 130 aa6.66□□□□□ -1.34
NDE1-210ENST00000574163 ZNF56Q15929 161 aa6.66□□□□□ -1.34
NDE1-210ENST00000574163 GAGE13Q4V321 117 aa6.66□□□□□ -1.34
NDE1-210ENST00000574163 LINC01551Q86U37 167 aa6.66□□□□□ -1.34
NDE1-210ENST00000574163 RPL36ALQ969Q0 106 aaKnown RBP6.66□□□□□ -1.34
NDE1-210ENST00000574163 RNASE7Q9H1E1 156 aaKnown RBP6.66□□□□□ -1.34
NDE1-210ENST00000574163 KIF25-AS1Q9Y6Z4 181 aa6.66□□□□□ -1.34
NDE1-210ENST00000574163 BIRC6Q9NR09 4857 aa6.65□□□□□ -1.34
NDE1-210ENST00000574163 TRBV7-3A0A075B6L6 115 aa6.65□□□□□ -1.34
NDE1-210ENST00000574163 IGHV3-38A0A0C4DH36 116 aa6.65□□□□□ -1.34
NDE1-210ENST00000574163 MUC21A0A0G2JKD1 596 aa6.65□□□□□ -1.34
NDE1-210ENST00000574163 MUC21A0A140T8X8 626 aa6.65□□□□□ -1.34
NDE1-210ENST00000574163 A8MWL6 223 aa6.65□□□□□ -1.34
NDE1-210ENST00000574163 LINC00315P59091 139 aa6.65□□□□□ -1.34
NDE1-210ENST00000574163 UBE2D3P61077 147 aa6.65□□□□□ -1.34
NDE1-210ENST00000574163 UBE2D2P62837 147 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms