RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 TMSB15BA0A087X1C1 80 aa11.98□□□□□ -0.49
CHD3-214ENST00000572579 LAGE3Q14657 143 aa11.98□□□□□ -0.49
CHD3-214ENST00000572579 LINC01559Q495D7 138 aa11.98□□□□□ -0.49
CHD3-214ENST00000572579 FAM162BQ5T6X4 162 aa11.98□□□□□ -0.49
CHD3-214ENST00000572579 SFRP2Q96HF1 295 aa11.98□□□□□ -0.49
CHD3-214ENST00000572579 FMC1Q96HJ9 113 aa11.97□□□□□ -0.49
CHD3-214ENST00000572579 LECT2O14960 151 aa11.96□□□□□ -0.49
CHD3-214ENST00000572579 PAGE4O60829 102 aa11.96□□□□□ -0.49
CHD3-214ENST00000572579 RGS21Q2M5E4 152 aa11.96□□□□□ -0.49
CHD3-214ENST00000572579 CST9LP1Q5W188 147 aa11.96□□□□□ -0.49
CHD3-214ENST00000572579 TMEM70Q9BUB7 260 aa11.96□□□□□ -0.49
CHD3-214ENST00000572579 FAM74A4Q5TZK3 123 aa11.95□□□□□ -0.5
CHD3-214ENST00000572579 NIT1Q86X76 327 aa11.95□□□□□ -0.5
CHD3-214ENST00000572579 KCNRGQ8N5I3 272 aa11.95□□□□□ -0.5
CHD3-214ENST00000572579 MBD3L1Q8WWY6 194 aa11.95□□□□□ -0.5
CHD3-214ENST00000572579 FRZBQ92765 325 aa11.95□□□□□ -0.5
CHD3-214ENST00000572579 BOLA1Q9Y3E2 137 aa11.95□□□□□ -0.5
CHD3-214ENST00000572579 M0R381 172 aa11.94□□□□□ -0.5
CHD3-214ENST00000572579 RPL19P84098 196 aaKnown RBP11.94□□□□□ -0.5
CHD3-214ENST00000572579 MLST8Q9BVC4 326 aa11.94□□□□□ -0.5
CHD3-214ENST00000572579 DMBT1Q9UGM3 2413 aaPredicted RBP11.94□□□□□ -0.5
CHD3-214ENST00000572579 A0A1B0GV50 99 aa11.93□□□□□ -0.5
CHD3-214ENST00000572579 RHODO00212 210 aa11.93□□□□□ -0.5
CHD3-214ENST00000572579 UBE2G1P62253 170 aa11.93□□□□□ -0.5
CHD3-214ENST00000572579 SYT8Q8NBV8 401 aa11.93□□□□□ -0.5
CHD3-214ENST00000572579 SFT2D1Q8WV19 159 aa11.93□□□□□ -0.5
CHD3-214ENST00000572579 BAALCQ8WXS3 180 aa11.93□□□□□ -0.5
CHD3-214ENST00000572579 TM2D2Q9BX73 214 aa11.93□□□□□ -0.5
CHD3-214ENST00000572579 PHLDA3Q9Y5J5 127 aa11.93□□□□□ -0.5
CHD3-214ENST00000572579 A0A087WWC5 75 aa11.92□□□□□ -0.5
CHD3-214ENST00000572579 TRAV8-3A0A0A6YYJ7 113 aa11.92□□□□□ -0.5
CHD3-214ENST00000572579 SCO2A0A1W2PP80 73 aa11.92□□□□□ -0.5
CHD3-214ENST00000572579 Q6ZSA8 131 aa11.92□□□□□ -0.5
CHD3-214ENST00000572579 TCEAL7Q9BRU2 100 aa11.92□□□□□ -0.5
CHD3-214ENST00000572579 SEC11BP0C7V7 166 aa11.91□□□□□ -0.5
CHD3-214ENST00000572579 TPT1P13693 172 aaKnown RBP11.91□□□□□ -0.5
CHD3-214ENST00000572579 AKR1C3P42330 323 aa11.91□□□□□ -0.5
CHD3-214ENST00000572579 UBE2D3P61077 147 aa11.91□□□□□ -0.5
CHD3-214ENST00000572579 UBE2D2P62837 147 aa11.91□□□□□ -0.5
CHD3-214ENST00000572579 LINC01620Q4KN68 170 aa11.91□□□□□ -0.5
CHD3-214ENST00000572579 FAM213BQ8TBF2 198 aa11.91□□□□□ -0.5
CHD3-214ENST00000572579 ZNF345Q14585 488 aa11.9□□□□□ -0.5
CHD3-214ENST00000572579 ZFP82Q8N141 532 aa11.9□□□□□ -0.5
CHD3-214ENST00000572579 OR10AG1Q8NH19 301 aa11.9□□□□□ -0.5
CHD3-214ENST00000572579 STOML3Q8TAV4 291 aa11.9□□□□□ -0.5
CHD3-214ENST00000572579 KLK12Q9UKR0 248 aa11.9□□□□□ -0.5
CHD3-214ENST00000572579 MUC21A0A0G2JKD1 596 aa11.89□□□□□ -0.51
CHD3-214ENST00000572579 MUC21A0A140T8X8 626 aa11.89□□□□□ -0.51
CHD3-214ENST00000572579 C1QBP02746 253 aa11.89□□□□□ -0.51
CHD3-214ENST00000572579 CCL20P78556 96 aa11.89□□□□□ -0.51
CHD3-214ENST00000572579 PRR27Q6MZM9 219 aa11.89□□□□□ -0.51
CHD3-214ENST00000572579 SSBP4Q9BWG4 385 aaPredicted RBP11.89□□□□□ -0.51
CHD3-214ENST00000572579 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.88□□□□□ -0.51
CHD3-214ENST00000572579 TRBV10-1A0A0K0K1A3 114 aa11.88□□□□□ -0.51
CHD3-214ENST00000572579 HMSDA8MTL9 139 aa11.88□□□□□ -0.51
CHD3-214ENST00000572579 OR10G8Q8NGN5 311 aa11.88□□□□□ -0.51
CHD3-214ENST00000572579 TRBV7-3A0A075B6L6 115 aa11.87□□□□□ -0.51
CHD3-214ENST00000572579 BAGE2Q86Y30 109 aa11.87□□□□□ -0.51
CHD3-214ENST00000572579 NEXN-AS1Q8NBZ9 246 aa11.87□□□□□ -0.51
CHD3-214ENST00000572579 UMAD1C9J7I0 102 aa11.86□□□□□ -0.51
CHD3-214ENST00000572579 FAM229AH3BQW9 127 aa11.86□□□□□ -0.51
CHD3-214ENST00000572579 BCL2L11O43521 198 aa11.86□□□□□ -0.51
CHD3-214ENST00000572579 SNAI2O43623 268 aa11.86□□□□□ -0.51
CHD3-214ENST00000572579 TOR2AQ5JU69 321 aa11.86□□□□□ -0.51
CHD3-214ENST00000572579 ZNF471Q9BX82 626 aaPredicted RBP11.86□□□□□ -0.51
CHD3-214ENST00000572579 KIF25-AS1Q9Y6Z4 181 aa11.86□□□□□ -0.51
CHD3-214ENST00000572579 IGKV2D-24A0A075B6R9 120 aa11.85□□□□□ -0.51
CHD3-214ENST00000572579 S100A9P06702 114 aaKnown RBP11.85□□□□□ -0.51
CHD3-214ENST00000572579 RAB4BP61018 213 aa11.85□□□□□ -0.51
CHD3-214ENST00000572579 RPL36AP83881 106 aaKnown RBP11.85□□□□□ -0.51
CHD3-214ENST00000572579 ATRAIDQ6UW56 229 aa11.85□□□□□ -0.51
CHD3-214ENST00000572579 ENHOQ6UWT2 76 aa11.85□□□□□ -0.51
CHD3-214ENST00000572579 TMUB2Q71RG4 321 aa11.85□□□□□ -0.51
CHD3-214ENST00000572579 RPL36ALQ969Q0 106 aaKnown RBP11.85□□□□□ -0.51
CHD3-214ENST00000572579 UBE2WQ96B02 151 aa11.85□□□□□ -0.51
CHD3-214ENST00000572579 DERL1Q9BUN8 251 aa11.85□□□□□ -0.51
CHD3-214ENST00000572579 LRP1Q07954 4544 aaKnown RBP11.85□□□□□ -0.51
CHD3-214ENST00000572579 A0A0D9SG52 128 aa11.84□□□□□ -0.51
CHD3-214ENST00000572579 CXCL1P09341 107 aa11.84□□□□□ -0.51
CHD3-214ENST00000572579 H2AFB1P0C5Y9 115 aa11.84□□□□□ -0.51
CHD3-214ENST00000572579 SSTP61278 116 aa11.84□□□□□ -0.51
CHD3-214ENST00000572579 NTM-AS1Q6ZSK4 140 aa11.84□□□□□ -0.51
CHD3-214ENST00000572579 TRBV6-8A0A0A6YYG3 113 aa11.83□□□□□ -0.52
CHD3-214ENST00000572579 IGLV2-8P01709 118 aa11.83□□□□□ -0.52
CHD3-214ENST00000572579 OR5AL1P0C617 328 aa11.83□□□□□ -0.52
CHD3-214ENST00000572579 URGCP-MRPS24S4R325 110 aa11.83□□□□□ -0.52
CHD3-214ENST00000572579 RPL35P42766 123 aaKnown RBP11.82□□□□□ -0.52
CHD3-214ENST00000572579 CHCHD7Q9BUK0 85 aa11.82□□□□□ -0.52
CHD3-214ENST00000572579 COX11Q9Y6N1 276 aa11.82□□□□□ -0.52
CHD3-214ENST00000572579 A0A087WX48 190 aa11.81□□□□□ -0.52
CHD3-214ENST00000572579 KANTRA0A1W2PQU2 76 aa11.81□□□□□ -0.52
CHD3-214ENST00000572579 GZMBP10144 247 aa11.81□□□□□ -0.52
CHD3-214ENST00000572579 KRTAP10-4P60372 401 aaPredicted RBP11.81□□□□□ -0.52
CHD3-214ENST00000572579 ZNF56Q15929 161 aa11.81□□□□□ -0.52
CHD3-214ENST00000572579 MPV17L2Q567V2 206 aa11.81□□□□□ -0.52
CHD3-214ENST00000572579 SCXQ7RTU7 201 aa11.81□□□□□ -0.52
CHD3-214ENST00000572579 Q8N976 141 aa11.81□□□□□ -0.52
CHD3-214ENST00000572579 RBFOX3A6NFN3 312 aa11.8□□□□□ -0.52
CHD3-214ENST00000572579 LINC00528Q8N1L1 170 aa11.8□□□□□ -0.52
CHD3-214ENST00000572579 C11orf52Q96A22 123 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms