RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 PVALBP20472 110 aaPredicted RBP7.99□□□□□ -1.13
CCDC40-208ENST00000572270 RBX1P62877 108 aa7.99□□□□□ -1.13
CCDC40-208ENST00000572270 ATP6V1FQ16864 119 aa7.99□□□□□ -1.13
CCDC40-208ENST00000572270 KCNIP2Q9NS61 270 aa7.99□□□□□ -1.13
CCDC40-208ENST00000572270 TRAV8-4A0A0B4J246 113 aa7.98□□□□□ -1.13
CCDC40-208ENST00000572270 P01737 135 aa7.98□□□□□ -1.13
CCDC40-208ENST00000572270 REG3AQ06141 175 aa7.98□□□□□ -1.13
CCDC40-208ENST00000572270 KHDC3LQ587J8 217 aa7.98□□□□□ -1.13
CCDC40-208ENST00000572270 ARL6IP6Q8N6S5 226 aa7.98□□□□□ -1.13
CCDC40-208ENST00000572270 SGK494Q96LW2 274 aa7.98□□□□□ -1.13
CCDC40-208ENST00000572270 A0A096LNI7 61 aa7.97□□□□□ -1.13
CCDC40-208ENST00000572270 TAS2R45P59539 299 aa7.97□□□□□ -1.13
CCDC40-208ENST00000572270 SMUG1Q53HV7 270 aa7.97□□□□□ -1.13
CCDC40-208ENST00000572270 OR11H4Q8NGC9 324 aa7.97□□□□□ -1.13
CCDC40-208ENST00000572270 MRPS26Q9BYN8 205 aaKnown RBP7.97□□□□□ -1.13
CCDC40-208ENST00000572270 IGSF23A1L1A6 192 aa7.96□□□□□ -1.14
CCDC40-208ENST00000572270 GNG5P63218 68 aa7.96□□□□□ -1.14
CCDC40-208ENST00000572270 GAGE6Q13070 117 aa7.96□□□□□ -1.14
CCDC40-208ENST00000572270 TMEM97Q5BJF2 176 aa7.96□□□□□ -1.14
CCDC40-208ENST00000572270 CFAP161Q6P656 301 aa7.96□□□□□ -1.14
CCDC40-208ENST00000572270 OR10G8Q8NGN5 311 aa7.96□□□□□ -1.14
CCDC40-208ENST00000572270 THAP6Q8TBB0 222 aa7.96□□□□□ -1.14
CCDC40-208ENST00000572270 DEDD2Q8WXF8 326 aa7.96□□□□□ -1.14
CCDC40-208ENST00000572270 TRIM63Q969Q1 353 aa7.96□□□□□ -1.14
CCDC40-208ENST00000572270 IL36BQ9NZH7 164 aa7.96□□□□□ -1.14
CCDC40-208ENST00000572270 MBD2Q9UBB5 411 aa7.96□□□□□ -1.14
CCDC40-208ENST00000572270 PKIGQ9Y2B9 76 aa7.96□□□□□ -1.14
CCDC40-208ENST00000572270 SERTM2A0A1B0GWG4 89 aa7.95□□□□□ -1.14
CCDC40-208ENST00000572270 H3BVH4 76 aa7.95□□□□□ -1.14
CCDC40-208ENST00000572270 RAB5CP51148 216 aa7.95□□□□□ -1.14
CCDC40-208ENST00000572270 TMEM252Q8N6L7 170 aa7.95□□□□□ -1.14
CCDC40-208ENST00000572270 FAM25EA8MYX2 175 aa7.94□□□□□ -1.14
CCDC40-208ENST00000572270 K7EQM0 130 aa7.94□□□□□ -1.14
CCDC40-208ENST00000572270 PYDC2Q56P42 97 aa7.94□□□□□ -1.14
CCDC40-208ENST00000572270 SFRP2Q96HF1 295 aa7.94□□□□□ -1.14
CCDC40-208ENST00000572270 TRBV25-1A0A075B6N4 114 aa7.93□□□□□ -1.14
CCDC40-208ENST00000572270 IGKV3D-20A0A0C4DH25 116 aa7.93□□□□□ -1.14
CCDC40-208ENST00000572270 C17orf112F2Z3M2 114 aa7.93□□□□□ -1.14
CCDC40-208ENST00000572270 HIGD2BQ4VC39 106 aa7.93□□□□□ -1.14
CCDC40-208ENST00000572270 C15orf56Q8N910 161 aa7.93□□□□□ -1.14
CCDC40-208ENST00000572270 FER1L6-AS1Q8NA97 138 aa7.93□□□□□ -1.14
CCDC40-208ENST00000572270 INO80EQ8NBZ0 244 aaPredicted RBP7.93□□□□□ -1.14
CCDC40-208ENST00000572270 MITD1Q8WV92 249 aa7.93□□□□□ -1.14
CCDC40-208ENST00000572270 C11orf1Q9H5F2 150 aa7.93□□□□□ -1.14
CCDC40-208ENST00000572270 PSG8Q9UQ74 426 aa7.93□□□□□ -1.14
CCDC40-208ENST00000572270 IGLV1-50A0A075B6I6 118 aa7.92□□□□□ -1.14
CCDC40-208ENST00000572270 MT-ND6P03923 174 aa7.92□□□□□ -1.14
CCDC40-208ENST00000572270 NEXN-AS1Q8NBZ9 246 aa7.92□□□□□ -1.14
CCDC40-208ENST00000572270 DIRC1Q969H9 104 aa7.92□□□□□ -1.14
CCDC40-208ENST00000572270 FLVCR2Q9UPI3 526 aa7.92□□□□□ -1.14
CCDC40-208ENST00000572270 PHLDA3Q9Y5J5 127 aa7.92□□□□□ -1.14
CCDC40-208ENST00000572270 B4DEV8 164 aa7.91□□□□□ -1.14
CCDC40-208ENST00000572270 M0R381 172 aa7.91□□□□□ -1.14
CCDC40-208ENST00000572270 NDUFB6O95139 128 aa7.91□□□□□ -1.14
CCDC40-208ENST00000572270 ATP6V1G2O95670 118 aa7.91□□□□□ -1.14
CCDC40-208ENST00000572270 RAB2AP61019 212 aa7.91□□□□□ -1.14
CCDC40-208ENST00000572270 PRNTQ86SH4 94 aa7.91□□□□□ -1.14
CCDC40-208ENST00000572270 DERL1Q9BUN8 251 aa7.91□□□□□ -1.14
CCDC40-208ENST00000572270 TRAV1-1A0A0B4J248 108 aa7.9□□□□□ -1.14
CCDC40-208ENST00000572270 ARMS2P0C7Q2 107 aa7.9□□□□□ -1.14
CCDC40-208ENST00000572270 UBE2D1P51668 147 aa7.9□□□□□ -1.14
CCDC40-208ENST00000572270 FLI1Q01543 452 aaPredicted RBP7.9□□□□□ -1.14
CCDC40-208ENST00000572270 SPCS2Q15005 226 aa7.9□□□□□ -1.14
CCDC40-208ENST00000572270 ZNF56Q15929 161 aa7.9□□□□□ -1.14
CCDC40-208ENST00000572270 C1orf137Q5JT78 98 aa7.9□□□□□ -1.14
CCDC40-208ENST00000572270 NTM-AS1Q6ZSK4 140 aa7.9□□□□□ -1.14
CCDC40-208ENST00000572270 GFRA4Q9GZZ7 299 aa7.9□□□□□ -1.14
CCDC40-208ENST00000572270 TRAV6A0A075B6T7 132 aa7.89□□□□□ -1.15
CCDC40-208ENST00000572270 TPT1P13693 172 aaKnown RBP7.89□□□□□ -1.15
CCDC40-208ENST00000572270 RAB4BP61018 213 aa7.89□□□□□ -1.15
CCDC40-208ENST00000572270 SAPCD1Q5SSQ6 148 aa7.89□□□□□ -1.15
CCDC40-208ENST00000572270 ZFP82Q8N141 532 aa7.89□□□□□ -1.15
CCDC40-208ENST00000572270 C20orf203Q8NBC4 194 aa7.89□□□□□ -1.15
CCDC40-208ENST00000572270 OR5C1Q8NGR4 320 aa7.89□□□□□ -1.15
CCDC40-208ENST00000572270 SUN5Q8TC36 379 aa7.89□□□□□ -1.15
CCDC40-208ENST00000572270 WDR61Q9GZS3 305 aaKnown RBP7.89□□□□□ -1.15
CCDC40-208ENST00000572270 IGHV1-24A0A0C4DH33 117 aa7.88□□□□□ -1.15
CCDC40-208ENST00000572270 TRBV6-1A0A0K0K1D8 114 aa7.88□□□□□ -1.15
CCDC40-208ENST00000572270 FABP5P3A8MUU1 101 aa7.88□□□□□ -1.15
CCDC40-208ENST00000572270 TCRAP04437 139 aa7.88□□□□□ -1.15
CCDC40-208ENST00000572270 PQLC2Q6ZP29 291 aa7.88□□□□□ -1.15
CCDC40-208ENST00000572270 C5orf17Q8NAS9 161 aa7.88□□□□□ -1.15
CCDC40-208ENST00000572270 GAGE12HA6NDE8 117 aa7.87□□□□□ -1.15
CCDC40-208ENST00000572270 EIF3GO75821 320 aaKnown RBP eCLIP7.87□□□□□ -1.15
CCDC40-208ENST00000572270 RPL13AP40429 203 aaKnown RBP7.87□□□□□ -1.15
CCDC40-208ENST00000572270 SULT1A2P50226 295 aa7.87□□□□□ -1.15
CCDC40-208ENST00000572270 NHLH2Q02577 135 aa7.87□□□□□ -1.15
CCDC40-208ENST00000572270 IQCJQ1A5X6 159 aa7.87□□□□□ -1.15
CCDC40-208ENST00000572270 DNLZQ5SXM8 178 aa7.87□□□□□ -1.15
CCDC40-208ENST00000572270 IGLV4-60A0A075B6I1 120 aa7.86□□□□□ -1.15
CCDC40-208ENST00000572270 GRIFINA4D1Z8 144 aa7.86□□□□□ -1.15
CCDC40-208ENST00000572270 NAP1L6A6NFF2 107 aa7.86□□□□□ -1.15
CCDC40-208ENST00000572270 H0Y9J4 135 aa7.86□□□□□ -1.15
CCDC40-208ENST00000572270 M0R036 132 aa7.86□□□□□ -1.15
CCDC40-208ENST00000572270 RAB32Q13637 225 aa7.86□□□□□ -1.15
CCDC40-208ENST00000572270 GVQW2A0A096LPI5 108 aaPredicted RBP7.85□□□□□ -1.15
CCDC40-208ENST00000572270 A0A1B0GUV1 79 aa7.85□□□□□ -1.15
CCDC40-208ENST00000572270 LINC01547P58512 204 aaPredicted RBP7.85□□□□□ -1.15
CCDC40-208ENST00000572270 PRR27Q6MZM9 219 aa7.85□□□□□ -1.15
CCDC40-208ENST00000572270 AQP10Q96PS8 301 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms