RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 PIMREGQ9BSJ6 248 aa11.61□□□□□ -0.55
USP43-202ENST00000570475 SDHAF1A6NFY7 115 aa11.61□□□□□ -0.55
USP43-202ENST00000570475 IGHV4-39P01824 125 aa11.61□□□□□ -0.55
USP43-202ENST00000570475 ZFAND2AQ8N6M9 145 aa11.61□□□□□ -0.55
USP43-202ENST00000570475 AJUBAQ96IF1 538 aa11.61□□□□□ -0.55
USP43-202ENST00000570475 C10orf99Q6UWK7 81 aa11.6□□□□□ -0.55
USP43-202ENST00000570475 ZNF575Q86XF7 245 aa11.6□□□□□ -0.55
USP43-202ENST00000570475 HIST2H2BDQ6DRA6 164 aa11.6□□□□□ -0.55
USP43-202ENST00000570475 CNFNQ9BYD5 112 aa11.6□□□□□ -0.55
USP43-202ENST00000570475 HIGD1BQ9P298 99 aa11.6□□□□□ -0.55
USP43-202ENST00000570475 IGHV3OR16-12A0A075B7B8 117 aa11.59□□□□□ -0.55
USP43-202ENST00000570475 LGALS1P09382 135 aaKnown RBP11.59□□□□□ -0.55
USP43-202ENST00000570475 RRN3P1Q2M238 152 aa11.59□□□□□ -0.55
USP43-202ENST00000570475 DAZ1Q9NQZ3 744 aaKnown RBP11.59□□□□□ -0.55
USP43-202ENST00000570475 C11orf86A6NJI1 115 aa11.59□□□□□ -0.55
USP43-202ENST00000570475 FAM223BA6NKX1 122 aa11.59□□□□□ -0.55
USP43-202ENST00000570475 SYNJ2BPP57105 145 aa11.59□□□□□ -0.55
USP43-202ENST00000570475 FAM223AQ8IWN6 122 aa11.59□□□□□ -0.55
USP43-202ENST00000570475 IGLV2-18A0A075B6J9 118 aa11.59□□□□□ -0.55
USP43-202ENST00000570475 GAGE12HA6NDE8 117 aa11.59□□□□□ -0.55
USP43-202ENST00000570475 ZFP2Q6ZN57 461 aa11.59□□□□□ -0.55
USP43-202ENST00000570475 MTORP42345 2549 aa11.58□□□□□ -0.56
USP43-202ENST00000570475 NDUFA4O00483 81 aa11.58□□□□□ -0.56
USP43-202ENST00000570475 A0A0U1RRA0 63 aa11.57□□□□□ -0.56
USP43-202ENST00000570475 ZNF876PQ49A33 203 aa11.57□□□□□ -0.56
USP43-202ENST00000570475 MDFICQ9P1T7 246 aa11.57□□□□□ -0.56
USP43-202ENST00000570475 NDUFS8O00217 210 aa11.57□□□□□ -0.56
USP43-202ENST00000570475 SUMO4Q6EEV6 95 aa11.57□□□□□ -0.56
USP43-202ENST00000570475 SPAG8Q99932 426 aaPredicted RBP11.56□□□□□ -0.56
USP43-202ENST00000570475 TM2D2Q9BX73 214 aa11.56□□□□□ -0.56
USP43-202ENST00000570475 FLNCQ14315 2725 aa11.56□□□□□ -0.56
USP43-202ENST00000570475 CIDEAO60543 219 aa11.56□□□□□ -0.56
USP43-202ENST00000570475 PRM2P04554 102 aa11.56□□□□□ -0.56
USP43-202ENST00000570475 SNRPD3P62318 126 aaKnown RBP11.56□□□□□ -0.56
USP43-202ENST00000570475 TOMM6Q96B49 74 aa11.56□□□□□ -0.56
USP43-202ENST00000570475 SPXQ9BT56 116 aa11.56□□□□□ -0.56
USP43-202ENST00000570475 E9PLD3 99 aa11.56□□□□□ -0.56
USP43-202ENST00000570475 COX8CQ7Z4L0 72 aa11.56□□□□□ -0.56
USP43-202ENST00000570475 ZMAT4Q9H898 229 aa11.56□□□□□ -0.56
USP43-202ENST00000570475 PRRC2AP48634 2157 aaKnown RBP11.56□□□□□ -0.56
USP43-202ENST00000570475 EPG5Q9HCE0 2579 aa11.56□□□□□ -0.56
USP43-202ENST00000570475 FN1P02751 2386 aaKnown RBP11.55□□□□□ -0.56
USP43-202ENST00000570475 VCYO14598 125 aa11.55□□□□□ -0.56
USP43-202ENST00000570475 C20orf78Q9BR46 151 aa11.55□□□□□ -0.56
USP43-202ENST00000570475 IGHV4-30-2A0A087WSY4 118 aa11.55□□□□□ -0.56
USP43-202ENST00000570475 F8W1H4 67 aa11.55□□□□□ -0.56
USP43-202ENST00000570475 C11orf44Q8N8P7 122 aa11.55□□□□□ -0.56
USP43-202ENST00000570475 SRSF2Q01130 221 aaKnown RBP11.55□□□□□ -0.56
USP43-202ENST00000570475 CRYBG3Q68DQ2 2970 aa11.55□□□□□ -0.56
USP43-202ENST00000570475 SYT8Q8NBV8 401 aa11.55□□□□□ -0.56
USP43-202ENST00000570475 BSNQ9UPA5 3926 aa11.54□□□□□ -0.56
USP43-202ENST00000570475 RNASE3P12724 160 aaKnown RBP11.54□□□□□ -0.56
USP43-202ENST00000570475 NEXN-AS1Q8NBZ9 246 aa11.54□□□□□ -0.56
USP43-202ENST00000570475 DLX4Q92988 240 aaPredicted RBP11.54□□□□□ -0.56
USP43-202ENST00000570475 DUX3Q96PT4 197 aa11.54□□□□□ -0.56
USP43-202ENST00000570475 PMVKQ15126 192 aa11.54□□□□□ -0.56
USP43-202ENST00000570475 VCX2Q9H322 139 aa11.54□□□□□ -0.56
USP43-202ENST00000570475 IGHV4-59P01825 116 aa11.53□□□□□ -0.56
USP43-202ENST00000570475 PPP1R17O96001 155 aa11.53□□□□□ -0.56
USP43-202ENST00000570475 MRPL53Q96EL3 112 aaKnown RBP11.53□□□□□ -0.56
USP43-202ENST00000570475 ANKRD17O75179 2603 aaKnown RBP11.53□□□□□ -0.56
USP43-202ENST00000570475 USMG5Q96IX5 58 aa11.53□□□□□ -0.56
USP43-202ENST00000570475 GPHB5Q86YW7 130 aa11.52□□□□□ -0.56
USP43-202ENST00000570475 SPANXB1Q9NS25 103 aaPredicted RBP11.52□□□□□ -0.56
USP43-202ENST00000570475 DEFB136Q30KP8 78 aa11.52□□□□□ -0.57
USP43-202ENST00000570475 CEMP1Q6PRD7 247 aaPredicted RBP11.52□□□□□ -0.57
USP43-202ENST00000570475 PHLDA1Q8WV24 401 aaPredicted RBP11.51□□□□□ -0.57
USP43-202ENST00000570475 ZNF462Q96JM2 2506 aa11.51□□□□□ -0.57
USP43-202ENST00000570475 IGHV3-16A0A0C4DH30 117 aa11.51□□□□□ -0.57
USP43-202ENST00000570475 IGHV3-38A0A0C4DH36 116 aa11.51□□□□□ -0.57
USP43-202ENST00000570475 P0DMU3 169 aa11.51□□□□□ -0.57
USP43-202ENST00000570475 FAM231AP0DMU4 169 aa11.51□□□□□ -0.57
USP43-202ENST00000570475 FAM231CP0DMU5 169 aa11.51□□□□□ -0.57
USP43-202ENST00000570475 Q8N1Y9 231 aa11.51□□□□□ -0.57
USP43-202ENST00000570475 DGAT2L7PQ6IED9 249 aa11.51□□□□□ -0.57
USP43-202ENST00000570475 ITLN2Q8WWU7 325 aaPredicted RBP11.51□□□□□ -0.57
USP43-202ENST00000570475 ZANQ9Y493 2812 aa11.51□□□□□ -0.57
USP43-202ENST00000570475 A0A0J9YXV3 536 aa11.5□□□□□ -0.57
USP43-202ENST00000570475 TAL2Q16559 108 aa11.5□□□□□ -0.57
USP43-202ENST00000570475 ACANP16112 2415 aa11.5□□□□□ -0.57
USP43-202ENST00000570475 J3QQQ9 107 aa11.5□□□□□ -0.57
USP43-202ENST00000570475 CD28P10747 220 aa11.5□□□□□ -0.57
USP43-202ENST00000570475 TRAV12-1A0A0B4J245 112 aa11.49□□□□□ -0.57
USP43-202ENST00000570475 MSMBP08118 114 aa11.49□□□□□ -0.57
USP43-202ENST00000570475 MUC4Q99102 2169 aa11.49□□□□□ -0.57
USP43-202ENST00000570475 C9JAW5 83 aa11.49□□□□□ -0.57
USP43-202ENST00000570475 PIFOQ8TCI5 191 aa11.49□□□□□ -0.57
USP43-202ENST00000570475 PSMG3-AS1Q96PY0 264 aa11.49□□□□□ -0.57
USP43-202ENST00000570475 LENEPQ9Y5L5 61 aa11.49□□□□□ -0.57
USP43-202ENST00000570475 U3KQE9 123 aa11.49□□□□□ -0.57
USP43-202ENST00000570475 TRBV7-3A0A075B6L6 115 aa11.49□□□□□ -0.57
USP43-202ENST00000570475 LYRM7Q5U5X0 104 aa11.49□□□□□ -0.57
USP43-202ENST00000570475 ITPR1Q14643 2758 aa11.48□□□□□ -0.57
USP43-202ENST00000570475 TNFRSF18Q9Y5U5 241 aa11.48□□□□□ -0.57
USP43-202ENST00000570475 TSPAN13O95857 204 aa11.48□□□□□ -0.57
USP43-202ENST00000570475 ZNF625Q96I27 306 aaPredicted RBP11.48□□□□□ -0.57
USP43-202ENST00000570475 DEFB131AP59861 70 aa11.47□□□□□ -0.57
USP43-202ENST00000570475 DEFB112Q30KQ8 113 aa11.47□□□□□ -0.57
USP43-202ENST00000570475 DOPEY1Q5JWR5 2465 aa11.47□□□□□ -0.57
USP43-202ENST00000570475 A8MWV9 139 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms