RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 SSTP61278 116 aa12.56□□□□□ -0.4
COMMD4-222ENST00000568034 CACNG7P62955 275 aa12.56□□□□□ -0.4
COMMD4-222ENST00000568034 WDR73Q6P4I2 378 aa12.56□□□□□ -0.4
COMMD4-222ENST00000568034 ZFP2Q6ZN57 461 aa12.56□□□□□ -0.4
COMMD4-222ENST00000568034 PRO0255Q9UI72 69 aa12.56□□□□□ -0.4
COMMD4-222ENST00000568034 A0A087WWL8 130 aa12.55□□□□□ -0.4
COMMD4-222ENST00000568034 FAM231BA6NCW3 169 aa12.55□□□□□ -0.4
COMMD4-222ENST00000568034 CIDEAO60543 219 aa12.55□□□□□ -0.4
COMMD4-222ENST00000568034 TCTAP57738 103 aa12.55□□□□□ -0.4
COMMD4-222ENST00000568034 RNF212Q495C1 297 aa12.55□□□□□ -0.4
COMMD4-222ENST00000568034 Q6ZSN1 163 aa12.55□□□□□ -0.4
COMMD4-222ENST00000568034 SLC7A5P1Q8MH63 180 aa12.55□□□□□ -0.4
COMMD4-222ENST00000568034 PGLYRP4Q96LB8 373 aa12.55□□□□□ -0.4
COMMD4-222ENST00000568034 HHLA3Q9XRX5 114 aa12.55□□□□□ -0.4
COMMD4-222ENST00000568034 CARHSP1Q9Y2V2 147 aaKnown RBP12.55□□□□□ -0.4
COMMD4-222ENST00000568034 KIF25-AS1Q9Y6Z4 181 aa12.55□□□□□ -0.4
COMMD4-222ENST00000568034 HIGD1CA8MV81 97 aa12.54□□□□□ -0.4
COMMD4-222ENST00000568034 H3BNG1 76 aa12.54□□□□□ -0.4
COMMD4-222ENST00000568034 SMIM27A0A1W2PRY6 76 aa12.53□□□□□ -0.4
COMMD4-222ENST00000568034 RHODO00212 210 aa12.53□□□□□ -0.4
COMMD4-222ENST00000568034 PAX4O43316 350 aa12.53□□□□□ -0.4
COMMD4-222ENST00000568034 NTF3P20783 257 aa12.53□□□□□ -0.4
COMMD4-222ENST00000568034 LINC00315P59091 139 aa12.53□□□□□ -0.4
COMMD4-222ENST00000568034 SLAQ13239 276 aa12.53□□□□□ -0.4
COMMD4-222ENST00000568034 C15orf53Q8NAA6 179 aa12.53□□□□□ -0.4
COMMD4-222ENST00000568034 AP1S3Q96PC3 154 aa12.53□□□□□ -0.4
COMMD4-222ENST00000568034 RYR3Q15413 4870 aa12.53□□□□□ -0.4
COMMD4-222ENST00000568034 FAM74A4Q5TZK3 123 aa12.52□□□□□ -0.41
COMMD4-222ENST00000568034 C14orf178Q8N769 122 aaPredicted RBP12.52□□□□□ -0.41
COMMD4-222ENST00000568034 SLC25A29Q8N8R3 303 aa12.52□□□□□ -0.41
COMMD4-222ENST00000568034 NUP35Q8NFH5 326 aa12.52□□□□□ -0.41
COMMD4-222ENST00000568034 A0A096LPF7 62 aa12.51□□□□□ -0.41
COMMD4-222ENST00000568034 TRBV6-4A0A1B0GX49 114 aa12.51□□□□□ -0.41
COMMD4-222ENST00000568034 PPP1R2P9O14990 202 aa12.51□□□□□ -0.41
COMMD4-222ENST00000568034 HYDINQ4G0P3 5121 aa12.5□□□□□ -0.41
COMMD4-222ENST00000568034 LOC100131303A0A0U1RQF7 123 aa12.5□□□□□ -0.41
COMMD4-222ENST00000568034 EVI2AP22794 236 aa12.5□□□□□ -0.41
COMMD4-222ENST00000568034 TWIST1Q15672 202 aa12.5□□□□□ -0.41
COMMD4-222ENST00000568034 ANAPC16Q96DE5 110 aa12.5□□□□□ -0.41
COMMD4-222ENST00000568034 NAT8BQ9UHF3 227 aa12.5□□□□□ -0.41
COMMD4-222ENST00000568034 DNAH6Q9C0G6 4158 aa12.5□□□□□ -0.41
COMMD4-222ENST00000568034 RYR2Q92736 4967 aa12.49□□□□□ -0.41
COMMD4-222ENST00000568034 NUDT3O95989 172 aa12.49□□□□□ -0.41
COMMD4-222ENST00000568034 MT-ND4LP03901 98 aa12.49□□□□□ -0.41
COMMD4-222ENST00000568034 RHOHQ15669 191 aa12.49□□□□□ -0.41
COMMD4-222ENST00000568034 Q9UF83 564 aa12.49□□□□□ -0.41
COMMD4-222ENST00000568034 A0A1B0GUT8 65 aa12.48□□□□□ -0.41
COMMD4-222ENST00000568034 K7EQD1 137 aa12.48□□□□□ -0.41
COMMD4-222ENST00000568034 TRGC1P0CF51 173 aa12.48□□□□□ -0.41
COMMD4-222ENST00000568034 GYPEP15421 78 aa12.48□□□□□ -0.41
COMMD4-222ENST00000568034 LINC00476Q8WZB0 136 aa12.48□□□□□ -0.41
COMMD4-222ENST00000568034 ICOSQ9Y6W8 199 aa12.48□□□□□ -0.41
COMMD4-222ENST00000568034 LINC00694P0DN24 101 aa12.47□□□□□ -0.41
COMMD4-222ENST00000568034 CLRN3Q8NCR9 226 aa12.47□□□□□ -0.41
COMMD4-222ENST00000568034 DPH3P1Q9H4G8 78 aa12.47□□□□□ -0.41
COMMD4-222ENST00000568034 P0DMU3 169 aa12.46□□□□□ -0.41
COMMD4-222ENST00000568034 FAM231AP0DMU4 169 aa12.46□□□□□ -0.41
COMMD4-222ENST00000568034 FAM231CP0DMU5 169 aa12.46□□□□□ -0.41
COMMD4-222ENST00000568034 RAB4BP61018 213 aa12.46□□□□□ -0.41
COMMD4-222ENST00000568034 ZNF56Q15929 161 aa12.46□□□□□ -0.41
COMMD4-222ENST00000568034 BORCS7Q96B45 105 aa12.46□□□□□ -0.41
COMMD4-222ENST00000568034 PRADC1Q9BSG0 188 aa12.46□□□□□ -0.41
COMMD4-222ENST00000568034 SMIM17P0DL12 118 aa12.45□□□□□ -0.42
COMMD4-222ENST00000568034 MRPL23Q16540 153 aaKnown RBP12.45□□□□□ -0.42
COMMD4-222ENST00000568034 LGALS9CQ6DKI2 356 aa12.45□□□□□ -0.42
COMMD4-222ENST00000568034 KMT2AQ03164 3969 aa12.44□□□□□ -0.42
COMMD4-222ENST00000568034 LCE6AA0A183 80 aa12.44□□□□□ -0.42
COMMD4-222ENST00000568034 A0A1B0GXF2 115 aa12.44□□□□□ -0.42
COMMD4-222ENST00000568034 C7orf77A4D0Y5 90 aa12.44□□□□□ -0.42
COMMD4-222ENST00000568034 MGPP08493 103 aa12.44□□□□□ -0.42
COMMD4-222ENST00000568034 RIGQ13278 110 aa12.44□□□□□ -0.42
COMMD4-222ENST00000568034 CTDSP1Q9GZU7 261 aa12.44□□□□□ -0.42
COMMD4-222ENST00000568034 APOC3P02656 99 aa12.43□□□□□ -0.42
COMMD4-222ENST00000568034 FAM3BP58499 235 aaPredicted RBP12.43□□□□□ -0.42
COMMD4-222ENST00000568034 RHEBQ15382 184 aa12.43□□□□□ -0.42
COMMD4-222ENST00000568034 SUMO4Q6EEV6 95 aa12.43□□□□□ -0.42
COMMD4-222ENST00000568034 A0A087WWC5 75 aa12.42□□□□□ -0.42
COMMD4-222ENST00000568034 TRBV10-1A0A0K0K1A3 114 aa12.42□□□□□ -0.42
COMMD4-222ENST00000568034 GAGE12JA6NER3 117 aa12.42□□□□□ -0.42
COMMD4-222ENST00000568034 M0QY20 66 aa12.42□□□□□ -0.42
COMMD4-222ENST00000568034 SRIP30626 198 aa12.42□□□□□ -0.42
COMMD4-222ENST00000568034 GAGE1Q13065 139 aa12.42□□□□□ -0.42
COMMD4-222ENST00000568034 GAGE4Q13068 117 aa12.42□□□□□ -0.42
COMMD4-222ENST00000568034 GAGE5Q13069 117 aa12.42□□□□□ -0.42
COMMD4-222ENST00000568034 ESRGQ1W209 222 aa12.42□□□□□ -0.42
COMMD4-222ENST00000568034 GAGE13Q4V321 117 aa12.42□□□□□ -0.42
COMMD4-222ENST00000568034 MRPL54Q6P161 138 aaKnown RBP12.42□□□□□ -0.42
COMMD4-222ENST00000568034 TMEM191AQ9H0A3 160 aa12.42□□□□□ -0.42
COMMD4-222ENST00000568034 F5H697 171 aa12.41□□□□□ -0.42
COMMD4-222ENST00000568034 NEXN-AS1Q8NBZ9 246 aa12.41□□□□□ -0.42
COMMD4-222ENST00000568034 RNF185Q96GF1 192 aa12.41□□□□□ -0.42
COMMD4-222ENST00000568034 IMMP2LQ96T52 175 aa12.41□□□□□ -0.42
COMMD4-222ENST00000568034 TMEM242Q9NWH2 141 aa12.41□□□□□ -0.42
COMMD4-222ENST00000568034 LINC00588Q9Y4M8 146 aa12.41□□□□□ -0.42
COMMD4-222ENST00000568034 LY6G6CO95867 125 aa12.4□□□□□ -0.42
COMMD4-222ENST00000568034 SMIM15Q7Z3B0 74 aa12.4□□□□□ -0.42
COMMD4-222ENST00000568034 NEGR1Q7Z3B1 354 aa12.4□□□□□ -0.42
COMMD4-222ENST00000568034 SVBPQ8N300 66 aa12.4□□□□□ -0.42
COMMD4-222ENST00000568034 GATD1Q8NB37 220 aa12.4□□□□□ -0.42
COMMD4-222ENST00000568034 TRAV26-2A0A0B4J265 109 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms