RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 KRBOX1C9JBD0 128 aa3.24□□□□□ -1.89
CLK3-219ENST00000567805 H3BVH4 76 aa3.24□□□□□ -1.89
CLK3-219ENST00000567805 BCL2L11O43521 198 aa3.24□□□□□ -1.89
CLK3-219ENST00000567805 SH2D1AO60880 128 aa3.24□□□□□ -1.89
CLK3-219ENST00000567805 LTAP01374 205 aa3.24□□□□□ -1.89
CLK3-219ENST00000567805 S100A9P06702 114 aaKnown RBP3.24□□□□□ -1.89
CLK3-219ENST00000567805 CRYGDP07320 174 aa3.24□□□□□ -1.89
CLK3-219ENST00000567805 CRIP1P50238 77 aa3.24□□□□□ -1.89
CLK3-219ENST00000567805 KRTAP10-2P60368 255 aa3.24□□□□□ -1.89
CLK3-219ENST00000567805 ZNF674Q2M3X9 581 aa3.24□□□□□ -1.89
CLK3-219ENST00000567805 LGALSLQ3ZCW2 172 aaPredicted RBP3.24□□□□□ -1.89
CLK3-219ENST00000567805 LINC01556Q5JQF7 62 aa3.24□□□□□ -1.89
CLK3-219ENST00000567805 DNLZQ5SXM8 178 aa3.24□□□□□ -1.89
CLK3-219ENST00000567805 FAM162BQ5T6X4 162 aa3.24□□□□□ -1.89
CLK3-219ENST00000567805 CST9LP1Q5W188 147 aa3.24□□□□□ -1.89
CLK3-219ENST00000567805 SYT8Q8NBV8 401 aa3.24□□□□□ -1.89
CLK3-219ENST00000567805 OR11H4Q8NGC9 324 aa3.24□□□□□ -1.89
CLK3-219ENST00000567805 SFT2D1Q8WV19 159 aa3.24□□□□□ -1.89
CLK3-219ENST00000567805 MBD3L1Q8WWY6 194 aa3.24□□□□□ -1.89
CLK3-219ENST00000567805 ZC2HC1AQ96GY0 325 aa3.24□□□□□ -1.89
CLK3-219ENST00000567805 ZNF471Q9BX82 626 aaPredicted RBP3.24□□□□□ -1.89
CLK3-219ENST00000567805 PARLQ9H300 379 aa3.24□□□□□ -1.89
CLK3-219ENST00000567805 TNFRSF18Q9Y5U5 241 aa3.24□□□□□ -1.89
CLK3-219ENST00000567805 A0A087WTM6 91 aa3.23□□□□□ -1.89
CLK3-219ENST00000567805 IBA57-AS1B1ANH7 110 aa3.23□□□□□ -1.89
CLK3-219ENST00000567805 M0R036 132 aa3.23□□□□□ -1.89
CLK3-219ENST00000567805 RHODO00212 210 aa3.23□□□□□ -1.89
CLK3-219ENST00000567805 PAGE4O60829 102 aa3.23□□□□□ -1.89
CLK3-219ENST00000567805 PFDN1O60925 122 aa3.23□□□□□ -1.89
CLK3-219ENST00000567805 ARMS2P0C7Q2 107 aa3.23□□□□□ -1.89
CLK3-219ENST00000567805 TPT1P13693 172 aaKnown RBP3.23□□□□□ -1.89
CLK3-219ENST00000567805 AKR1C3P42330 323 aa3.23□□□□□ -1.89
CLK3-219ENST00000567805 EIF5AP63241 154 aaKnown RBP3.23□□□□□ -1.89
CLK3-219ENST00000567805 OR10J3Q5JRS4 329 aa3.23□□□□□ -1.89
CLK3-219ENST00000567805 LELP1Q5T871 98 aa3.23□□□□□ -1.89
CLK3-219ENST00000567805 UFSP1Q6NVU6 142 aa3.23□□□□□ -1.89
CLK3-219ENST00000567805 MAPKAPK5-AS1Q8N8E1 139 aa3.23□□□□□ -1.89
CLK3-219ENST00000567805 ATP6V0E2Q8NHE4 81 aa3.23□□□□□ -1.89
CLK3-219ENST00000567805 FAM213BQ8TBF2 198 aa3.23□□□□□ -1.89
CLK3-219ENST00000567805 GTSF1LQ9H1H1 148 aa3.23□□□□□ -1.89
CLK3-219ENST00000567805 PHLDA3Q9Y5J5 127 aa3.23□□□□□ -1.89
CLK3-219ENST00000567805 VPS13BQ7Z7G8 4022 aa3.22□□□□□ -1.89
CLK3-219ENST00000567805 A0A087WWC5 75 aa3.22□□□□□ -1.89
CLK3-219ENST00000567805 A0A1B0GV50 99 aa3.22□□□□□ -1.89
CLK3-219ENST00000567805 GRIFINA4D1Z8 144 aa3.22□□□□□ -1.89
CLK3-219ENST00000567805 PSCAO43653 123 aa3.22□□□□□ -1.89
CLK3-219ENST00000567805 CXCL1P09341 107 aa3.22□□□□□ -1.89
CLK3-219ENST00000567805 LINC00694P0DN24 101 aa3.22□□□□□ -1.89
CLK3-219ENST00000567805 RAB5CP51148 216 aa3.22□□□□□ -1.89
CLK3-219ENST00000567805 LAGE3Q14657 143 aa3.22□□□□□ -1.89
CLK3-219ENST00000567805 EIF5AL1Q6IS14 154 aaKnown RBP3.22□□□□□ -1.89
CLK3-219ENST00000567805 Q6ZSN1 163 aa3.22□□□□□ -1.89
CLK3-219ENST00000567805 TMUB2Q71RG4 321 aa3.22□□□□□ -1.89
CLK3-219ENST00000567805 ZFP82Q8N141 532 aa3.22□□□□□ -1.89
CLK3-219ENST00000567805 SFRP2Q96HF1 295 aa3.22□□□□□ -1.89
CLK3-219ENST00000567805 MLST8Q9BVC4 326 aa3.22□□□□□ -1.89
CLK3-219ENST00000567805 SAMD10Q9BYL1 202 aa3.22□□□□□ -1.89
CLK3-219ENST00000567805 JPT2Q9H910 190 aa3.22□□□□□ -1.89
CLK3-219ENST00000567805 SCRT2Q9NQ03 307 aa3.22□□□□□ -1.89
CLK3-219ENST00000567805 MANBALQ9NQG1 85 aa3.22□□□□□ -1.89
CLK3-219ENST00000567805 A0A087WWL8 130 aa3.21□□□□□ -1.9
CLK3-219ENST00000567805 TMSB15BA0A087X1C1 80 aa3.21□□□□□ -1.9
CLK3-219ENST00000567805 TRAV1-1A0A0B4J248 108 aa3.21□□□□□ -1.9
CLK3-219ENST00000567805 TRBV10-1A0A0K0K1A3 114 aa3.21□□□□□ -1.9
CLK3-219ENST00000567805 GAGE12JA6NER3 117 aa3.21□□□□□ -1.9
CLK3-219ENST00000567805 TEX46H3BTG2 121 aa3.21□□□□□ -1.9
CLK3-219ENST00000567805 M0R381 172 aa3.21□□□□□ -1.9
CLK3-219ENST00000567805 IGHV3-30P01768 117 aa3.21□□□□□ -1.9
CLK3-219ENST00000567805 IGHV3-33P01772 117 aa3.21□□□□□ -1.9
CLK3-219ENST00000567805 IGHV3-30-3P0DP02 117 aa3.21□□□□□ -1.9
CLK3-219ENST00000567805 IGHV3-30-5P0DP03 117 aa3.21□□□□□ -1.9
CLK3-219ENST00000567805 GAGE1Q13065 139 aa3.21□□□□□ -1.9
CLK3-219ENST00000567805 GAGE4Q13068 117 aa3.21□□□□□ -1.9
CLK3-219ENST00000567805 GAGE5Q13069 117 aa3.21□□□□□ -1.9
CLK3-219ENST00000567805 GAGE13Q4V321 117 aa3.21□□□□□ -1.9
CLK3-219ENST00000567805 FAM74A4Q5TZK3 123 aa3.21□□□□□ -1.9
CLK3-219ENST00000567805 BAGE2Q86Y30 109 aa3.21□□□□□ -1.9
CLK3-219ENST00000567805 Q8N1X5 172 aa3.21□□□□□ -1.9
CLK3-219ENST00000567805 C14orf178Q8N769 122 aaPredicted RBP3.21□□□□□ -1.9
CLK3-219ENST00000567805 KRTAP9-3Q9BYQ3 159 aa3.21□□□□□ -1.9
CLK3-219ENST00000567805 Q9HAA7 133 aa3.21□□□□□ -1.9
CLK3-219ENST00000567805 DNAH8Q96JB1 4490 aa3.21□□□□□ -1.9
CLK3-219ENST00000567805 ABCA13Q86UQ4 5058 aa3.2□□□□□ -1.9
CLK3-219ENST00000567805 TRBV7-3A0A075B6L6 115 aa3.2□□□□□ -1.9
CLK3-219ENST00000567805 TRAV8-3A0A0A6YYJ7 113 aa3.2□□□□□ -1.9
CLK3-219ENST00000567805 LRCOL1A6NCL2 159 aa3.2□□□□□ -1.9
CLK3-219ENST00000567805 SNAI2O43623 268 aa3.2□□□□□ -1.9
CLK3-219ENST00000567805 OR5AL1P0C617 328 aa3.2□□□□□ -1.9
CLK3-219ENST00000567805 GCSHP23434 173 aa3.2□□□□□ -1.9
CLK3-219ENST00000567805 FUSP35637 526 aaKnown RBP eCLIP3.2□□□□□ -1.9
CLK3-219ENST00000567805 RPL35P42766 123 aaKnown RBP3.2□□□□□ -1.9
CLK3-219ENST00000567805 SULT1A2P50226 295 aa3.2□□□□□ -1.9
CLK3-219ENST00000567805 RAB4BP61018 213 aa3.2□□□□□ -1.9
CLK3-219ENST00000567805 RPL36AP83881 106 aaKnown RBP3.2□□□□□ -1.9
CLK3-219ENST00000567805 RPL19P84098 196 aaKnown RBP3.2□□□□□ -1.9
CLK3-219ENST00000567805 PRR27Q6MZM9 219 aa3.2□□□□□ -1.9
CLK3-219ENST00000567805 TCTE3Q8IZS6 198 aa3.2□□□□□ -1.9
CLK3-219ENST00000567805 OR10G8Q8NGN5 311 aa3.2□□□□□ -1.9
CLK3-219ENST00000567805 NTN5Q8WTR8 489 aaPredicted RBP3.2□□□□□ -1.9
CLK3-219ENST00000567805 RPL36ALQ969Q0 106 aaKnown RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms