RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 PTH2Q96A98 100 aa6.15□□□□□ -1.43
CDH13-210ENST00000567445 C9orf85Q96MD7 179 aa6.15□□□□□ -1.43
CDH13-210ENST00000567445 PSMG3Q9BT73 122 aaPredicted RBP6.15□□□□□ -1.43
CDH13-210ENST00000567445 GAGE2DQ9UEU5 116 aa6.15□□□□□ -1.43
CDH13-210ENST00000567445 PSG8Q9UQ74 426 aa6.15□□□□□ -1.43
CDH13-210ENST00000567445 IGHV3-73A0A0B4J1V6 119 aa6.14□□□□□ -1.43
CDH13-210ENST00000567445 IGLV2-11P01706 119 aa6.14□□□□□ -1.43
CDH13-210ENST00000567445 MBP02144 154 aa6.14□□□□□ -1.43
CDH13-210ENST00000567445 MGST1P10620 155 aaKnown RBP6.14□□□□□ -1.43
CDH13-210ENST00000567445 FLI1Q01543 452 aaPredicted RBP6.14□□□□□ -1.43
CDH13-210ENST00000567445 UBE2V1Q13404 147 aa6.14□□□□□ -1.43
CDH13-210ENST00000567445 SMUG1Q53HV7 270 aa6.14□□□□□ -1.43
CDH13-210ENST00000567445 ZNF506Q5JVG8 444 aa6.14□□□□□ -1.43
CDH13-210ENST00000567445 LELP1Q5T871 98 aa6.14□□□□□ -1.43
CDH13-210ENST00000567445 DAZAP1Q96EP5 407 aaKnown RBP6.14□□□□□ -1.43
CDH13-210ENST00000567445 TMEM70Q9BUB7 260 aa6.14□□□□□ -1.43
CDH13-210ENST00000567445 TM2D2Q9BX73 214 aa6.14□□□□□ -1.43
CDH13-210ENST00000567445 Q9HAA7 133 aa6.14□□□□□ -1.43
CDH13-210ENST00000567445 FLG2Q5D862 2391 aaPredicted RBP6.13□□□□□ -1.43
CDH13-210ENST00000567445 FAT1Q14517 4588 aa6.13□□□□□ -1.43
CDH13-210ENST00000567445 GGTLC3B5MD39 225 aa6.13□□□□□ -1.43
CDH13-210ENST00000567445 CXorf1O96002 111 aa6.13□□□□□ -1.43
CDH13-210ENST00000567445 IGHV3-30P01768 117 aa6.13□□□□□ -1.43
CDH13-210ENST00000567445 IGHV3-33P01772 117 aa6.13□□□□□ -1.43
CDH13-210ENST00000567445 SMR3BP02814 79 aaPredicted RBP6.13□□□□□ -1.43
CDH13-210ENST00000567445 IGHV3-30-3P0DP02 117 aa6.13□□□□□ -1.43
CDH13-210ENST00000567445 IGHV3-30-5P0DP03 117 aa6.13□□□□□ -1.43
CDH13-210ENST00000567445 RNASE3P12724 160 aaKnown RBP6.13□□□□□ -1.43
CDH13-210ENST00000567445 ATP6V0CP27449 155 aa6.13□□□□□ -1.43
CDH13-210ENST00000567445 SERF2P84101 59 aa6.13□□□□□ -1.43
CDH13-210ENST00000567445 SAPCD1Q5SSQ6 148 aa6.13□□□□□ -1.43
CDH13-210ENST00000567445 PRNTQ86SH4 94 aa6.13□□□□□ -1.43
CDH13-210ENST00000567445 Q8N814 137 aa6.13□□□□□ -1.43
CDH13-210ENST00000567445 CYB561D1Q8N8Q1 229 aa6.13□□□□□ -1.43
CDH13-210ENST00000567445 TMEM75Q8N9X5 138 aa6.13□□□□□ -1.43
CDH13-210ENST00000567445 ATP6V0E2Q8NHE4 81 aa6.13□□□□□ -1.43
CDH13-210ENST00000567445 AQP10Q96PS8 301 aa6.13□□□□□ -1.43
CDH13-210ENST00000567445 GTSF1LQ9H1H1 148 aa6.13□□□□□ -1.43
CDH13-210ENST00000567445 TMEM167BQ9NRX6 74 aa6.13□□□□□ -1.43
CDH13-210ENST00000567445 EPDR1Q9UM22 224 aa6.13□□□□□ -1.43
CDH13-210ENST00000567445 SRRM2Q9UQ35 2752 aaKnown RBP6.13□□□□□ -1.43
CDH13-210ENST00000567445 H0Y8G0 127 aa6.12□□□□□ -1.43
CDH13-210ENST00000567445 HAMPP81172 84 aa6.12□□□□□ -1.43
CDH13-210ENST00000567445 LAGE3Q14657 143 aa6.12□□□□□ -1.43
CDH13-210ENST00000567445 TNFSF18Q9UNG2 199 aa6.12□□□□□ -1.43
CDH13-210ENST00000567445 ALG5Q9Y673 324 aa6.12□□□□□ -1.43
CDH13-210ENST00000567445 A0A1W2PRE2 83 aa6.11□□□□□ -1.43
CDH13-210ENST00000567445 ATP6V1G1O75348 118 aa6.11□□□□□ -1.43
CDH13-210ENST00000567445 PIK3CD-AS1Q5SR53 167 aa6.11□□□□□ -1.43
CDH13-210ENST00000567445 ZFP2Q6ZN57 461 aa6.11□□□□□ -1.43
CDH13-210ENST00000567445 Q6ZSN1 163 aa6.11□□□□□ -1.43
CDH13-210ENST00000567445 ACTR3CQ9C0K3 210 aaPredicted RBP6.11□□□□□ -1.43
CDH13-210ENST00000567445 SH3BGRL3Q9H299 93 aa6.11□□□□□ -1.43
CDH13-210ENST00000567445 CHTOPQ9Y3Y2 248 aaKnown RBP6.11□□□□□ -1.43
CDH13-210ENST00000567445 MYCBP2O75592 4640 aa6.11□□□□□ -1.43
CDH13-210ENST00000567445 IGKV3D-20A0A0C4DH25 116 aa6.1□□□□□ -1.43
CDH13-210ENST00000567445 A8MWV9 139 aa6.1□□□□□ -1.43
CDH13-210ENST00000567445 S100A4P26447 101 aaKnown RBP6.1□□□□□ -1.43
CDH13-210ENST00000567445 TMEM18Q96B42 140 aa6.1□□□□□ -1.43
CDH13-210ENST00000567445 LINC00479Q96M42 142 aa6.1□□□□□ -1.43
CDH13-210ENST00000567445 PARLQ9H300 379 aa6.1□□□□□ -1.43
CDH13-210ENST00000567445 VCX2Q9H322 139 aa6.1□□□□□ -1.43
CDH13-210ENST00000567445 ARL2-SNX15V9GYD0 113 aa6.1□□□□□ -1.43
CDH13-210ENST00000567445 GAGE12JA6NER3 117 aa6.09□□□□□ -1.43
CDH13-210ENST00000567445 FABP5P3A8MUU1 101 aa6.09□□□□□ -1.43
CDH13-210ENST00000567445 RHODO00212 210 aa6.09□□□□□ -1.43
CDH13-210ENST00000567445 C1QBP02746 253 aa6.09□□□□□ -1.43
CDH13-210ENST00000567445 LINC00694P0DN24 101 aa6.09□□□□□ -1.43
CDH13-210ENST00000567445 ASIPP42127 132 aa6.09□□□□□ -1.43
CDH13-210ENST00000567445 SSTP61278 116 aa6.09□□□□□ -1.43
CDH13-210ENST00000567445 GAGE1Q13065 139 aa6.09□□□□□ -1.43
CDH13-210ENST00000567445 GAGE4Q13068 117 aa6.09□□□□□ -1.43
CDH13-210ENST00000567445 GAGE5Q13069 117 aa6.09□□□□□ -1.43
CDH13-210ENST00000567445 LGALSLQ3ZCW2 172 aaPredicted RBP6.09□□□□□ -1.43
CDH13-210ENST00000567445 UFSP1Q6NVU6 142 aa6.09□□□□□ -1.43
CDH13-210ENST00000567445 MED28Q9H204 178 aa6.09□□□□□ -1.43
CDH13-210ENST00000567445 A0A087WWC5 75 aa6.09□□□□□ -1.44
CDH13-210ENST00000567445 TRAV8-3A0A0A6YYJ7 113 aa6.09□□□□□ -1.44
CDH13-210ENST00000567445 BORCS7-ASMTA0A0B4J1R7 106 aa6.09□□□□□ -1.44
CDH13-210ENST00000567445 IFNA7P01567 189 aa6.09□□□□□ -1.44
CDH13-210ENST00000567445 FGF8P55075 233 aaPredicted RBP6.09□□□□□ -1.44
CDH13-210ENST00000567445 WFDC2Q14508 124 aa6.09□□□□□ -1.44
CDH13-210ENST00000567445 Q5BKY6 102 aa6.09□□□□□ -1.44
CDH13-210ENST00000567445 INO80EQ8NBZ0 244 aaPredicted RBP6.09□□□□□ -1.44
CDH13-210ENST00000567445 OR2T35Q8NGX2 323 aa6.09□□□□□ -1.44
CDH13-210ENST00000567445 IL36BQ9NZH7 164 aa6.09□□□□□ -1.44
CDH13-210ENST00000567445 A0A0U1RRA0 63 aa6.08□□□□□ -1.44
CDH13-210ENST00000567445 CTXND1A0A1B0GTU2 59 aa6.08□□□□□ -1.44
CDH13-210ENST00000567445 B4DEV8 164 aa6.08□□□□□ -1.44
CDH13-210ENST00000567445 PEX7O00628 323 aa6.08□□□□□ -1.44
CDH13-210ENST00000567445 PTTG1O95997 202 aa6.08□□□□□ -1.44
CDH13-210ENST00000567445 GIPP09681 153 aaPredicted RBP6.08□□□□□ -1.44
CDH13-210ENST00000567445 UBE2G2P60604 165 aa6.08□□□□□ -1.44
CDH13-210ENST00000567445 ZNF726P1Q15940 193 aa6.08□□□□□ -1.44
CDH13-210ENST00000567445 RPL7L1Q6DKI1 246 aaKnown RBP6.08□□□□□ -1.44
CDH13-210ENST00000567445 DAZ4Q86SG3 579 aaKnown RBP6.08□□□□□ -1.44
CDH13-210ENST00000567445 Q86TA4 180 aa6.08□□□□□ -1.44
CDH13-210ENST00000567445 SAMD10Q9BYL1 202 aa6.08□□□□□ -1.44
CDH13-210ENST00000567445 NKX6-2Q9C056 277 aaPredicted RBP6.08□□□□□ -1.44
CDH13-210ENST00000567445 JPT2Q9H910 190 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms