RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 MSRB1Q9NZV6 116 aa6.88□□□□□ -1.31
GTF3C1-206ENST00000566779 PHLDA3Q9Y5J5 127 aa6.88□□□□□ -1.31
GTF3C1-206ENST00000566779 HMSDA8MTL9 139 aa6.87□□□□□ -1.31
GTF3C1-206ENST00000566779 UMAD1C9J7I0 102 aa6.87□□□□□ -1.31
GTF3C1-206ENST00000566779 PSCAO43653 123 aa6.87□□□□□ -1.31
GTF3C1-206ENST00000566779 ARMS2P0C7Q2 107 aa6.87□□□□□ -1.31
GTF3C1-206ENST00000566779 MGST1P10620 155 aaKnown RBP6.87□□□□□ -1.31
GTF3C1-206ENST00000566779 SSTP61278 116 aa6.87□□□□□ -1.31
GTF3C1-206ENST00000566779 RPL19P84098 196 aaKnown RBP6.87□□□□□ -1.31
GTF3C1-206ENST00000566779 SH2D6Q7Z4S9 175 aa6.87□□□□□ -1.31
GTF3C1-206ENST00000566779 ATP6V0E2Q8NHE4 81 aa6.87□□□□□ -1.31
GTF3C1-206ENST00000566779 SAMD10Q9BYL1 202 aa6.87□□□□□ -1.31
GTF3C1-206ENST00000566779 GNG13Q9P2W3 67 aa6.87□□□□□ -1.31
GTF3C1-206ENST00000566779 ZFP30Q9Y2G7 519 aa6.87□□□□□ -1.31
GTF3C1-206ENST00000566779 IGHV3-38A0A0C4DH36 116 aa6.86□□□□□ -1.31
GTF3C1-206ENST00000566779 MUC21A0A0G2JKD1 596 aa6.86□□□□□ -1.31
GTF3C1-206ENST00000566779 MUC21A0A140T8X8 626 aa6.86□□□□□ -1.31
GTF3C1-206ENST00000566779 TRBV6-4A0A1B0GX49 114 aa6.86□□□□□ -1.31
GTF3C1-206ENST00000566779 A8MWV9 139 aa6.86□□□□□ -1.31
GTF3C1-206ENST00000566779 KRBOX1C9JBD0 128 aa6.86□□□□□ -1.31
GTF3C1-206ENST00000566779 LTAP01374 205 aa6.86□□□□□ -1.31
GTF3C1-206ENST00000566779 CRIP1P50238 77 aa6.86□□□□□ -1.31
GTF3C1-206ENST00000566779 Q6ZSN1 163 aa6.86□□□□□ -1.31
GTF3C1-206ENST00000566779 NFE4Q86UQ8 179 aa6.86□□□□□ -1.31
GTF3C1-206ENST00000566779 C14orf178Q8N769 122 aaPredicted RBP6.86□□□□□ -1.31
GTF3C1-206ENST00000566779 TCEAL7Q9BRU2 100 aa6.86□□□□□ -1.31
GTF3C1-206ENST00000566779 IL36BQ9NZH7 164 aa6.86□□□□□ -1.31
GTF3C1-206ENST00000566779 DNAH11Q96DT5 4516 aa6.86□□□□□ -1.31
GTF3C1-206ENST00000566779 PKD1P98161 4303 aa6.85□□□□□ -1.31
GTF3C1-206ENST00000566779 Q6ZRN7 208 aaPredicted RBP6.85□□□□□ -1.31
GTF3C1-206ENST00000566779 BAGE2Q86Y30 109 aa6.85□□□□□ -1.31
GTF3C1-206ENST00000566779 C10orf126Q8N4M7 172 aa6.85□□□□□ -1.31
GTF3C1-206ENST00000566779 MBD3L1Q8WWY6 194 aa6.85□□□□□ -1.31
GTF3C1-206ENST00000566779 KRTAP17-1Q9BYP8 105 aa6.85□□□□□ -1.31
GTF3C1-206ENST00000566779 RHODO00212 210 aa6.84□□□□□ -1.31
GTF3C1-206ENST00000566779 CIDEAO60543 219 aa6.84□□□□□ -1.31
GTF3C1-206ENST00000566779 CCL20P78556 96 aa6.84□□□□□ -1.31
GTF3C1-206ENST00000566779 ZNF56Q15929 161 aa6.84□□□□□ -1.31
GTF3C1-206ENST00000566779 ZNF674Q2M3X9 581 aa6.84□□□□□ -1.31
GTF3C1-206ENST00000566779 ZFP82Q8N141 532 aa6.84□□□□□ -1.31
GTF3C1-206ENST00000566779 MAPKAPK5-AS1Q8N8E1 139 aa6.84□□□□□ -1.31
GTF3C1-206ENST00000566779 TPPP3Q9BW30 176 aa6.84□□□□□ -1.31
GTF3C1-206ENST00000566779 PKHD1P08F94 4074 aa6.84□□□□□ -1.31
GTF3C1-206ENST00000566779 DYNC1H1Q14204 4646 aaKnown RBP6.83□□□□□ -1.32
GTF3C1-206ENST00000566779 LELP1Q5T871 98 aa6.83□□□□□ -1.32
GTF3C1-206ENST00000566779 ZFP2Q6ZN57 461 aa6.83□□□□□ -1.32
GTF3C1-206ENST00000566779 PTH2Q96A98 100 aa6.83□□□□□ -1.32
GTF3C1-206ENST00000566779 DERL1Q9BUN8 251 aa6.83□□□□□ -1.32
GTF3C1-206ENST00000566779 GTSF1LQ9H1H1 148 aa6.83□□□□□ -1.32
GTF3C1-206ENST00000566779 MANBALQ9NQG1 85 aa6.83□□□□□ -1.32
GTF3C1-206ENST00000566779 Q9UF83 564 aa6.83□□□□□ -1.32
GTF3C1-206ENST00000566779 A0A087WTM6 91 aa6.82□□□□□ -1.32
GTF3C1-206ENST00000566779 TRBV6-1A0A0K0K1D8 114 aa6.82□□□□□ -1.32
GTF3C1-206ENST00000566779 TEX46H3BTG2 121 aa6.82□□□□□ -1.32
GTF3C1-206ENST00000566779 S100A9P06702 114 aaKnown RBP6.82□□□□□ -1.32
GTF3C1-206ENST00000566779 RPL35P42766 123 aaKnown RBP6.82□□□□□ -1.32
GTF3C1-206ENST00000566779 TIRAPP58753 221 aa6.82□□□□□ -1.32
GTF3C1-206ENST00000566779 CENPWQ5EE01 88 aa6.82□□□□□ -1.32
GTF3C1-206ENST00000566779 LINC01556Q5JQF7 62 aa6.82□□□□□ -1.32
GTF3C1-206ENST00000566779 SPANXN1Q5VSR9 72 aa6.82□□□□□ -1.32
GTF3C1-206ENST00000566779 EIF5AL1Q6IS14 154 aaKnown RBP6.82□□□□□ -1.32
GTF3C1-206ENST00000566779 OR10AG1Q8NH19 301 aa6.82□□□□□ -1.32
GTF3C1-206ENST00000566779 F5H697 171 aa6.81□□□□□ -1.32
GTF3C1-206ENST00000566779 IFNA1P01562 189 aa6.81□□□□□ -1.32
GTF3C1-206ENST00000566779 AKAP14Q86UN6 197 aa6.81□□□□□ -1.32
GTF3C1-206ENST00000566779 SFRP2Q96HF1 295 aa6.81□□□□□ -1.32
GTF3C1-206ENST00000566779 URGCP-MRPS24S4R325 110 aa6.81□□□□□ -1.32
GTF3C1-206ENST00000566779 PCLOQ9Y6V0 5065 aa6.81□□□□□ -1.32
GTF3C1-206ENST00000566779 RYR1P21817 5038 aa6.81□□□□□ -1.32
GTF3C1-206ENST00000566779 RAB19A4D1S5 217 aa6.8□□□□□ -1.32
GTF3C1-206ENST00000566779 CDK2AP2O75956 126 aa6.8□□□□□ -1.32
GTF3C1-206ENST00000566779 MGPP08493 103 aa6.8□□□□□ -1.32
GTF3C1-206ENST00000566779 GZMBP10144 247 aa6.8□□□□□ -1.32
GTF3C1-206ENST00000566779 RAB5CP51148 216 aa6.8□□□□□ -1.32
GTF3C1-206ENST00000566779 UFSP1Q6NVU6 142 aa6.8□□□□□ -1.32
GTF3C1-206ENST00000566779 COX8CQ7Z4L0 72 aa6.8□□□□□ -1.32
GTF3C1-206ENST00000566779 TCTE3Q8IZS6 198 aa6.8□□□□□ -1.32
GTF3C1-206ENST00000566779 DAZAP1Q96EP5 407 aaKnown RBP6.8□□□□□ -1.32
GTF3C1-206ENST00000566779 RBFOX3A6NFN3 312 aa6.79□□□□□ -1.32
GTF3C1-206ENST00000566779 K7EP13 123 aa6.79□□□□□ -1.32
GTF3C1-206ENST00000566779 LECT2O14960 151 aa6.79□□□□□ -1.32
GTF3C1-206ENST00000566779 SMIM17P0DL12 118 aa6.79□□□□□ -1.32
GTF3C1-206ENST00000566779 LINC00694P0DN24 101 aa6.79□□□□□ -1.32
GTF3C1-206ENST00000566779 GNG4P50150 75 aa6.79□□□□□ -1.32
GTF3C1-206ENST00000566779 SULT1A2P50226 295 aa6.79□□□□□ -1.32
GTF3C1-206ENST00000566779 HAMPP81172 84 aa6.79□□□□□ -1.32
GTF3C1-206ENST00000566779 RPL36AP83881 106 aaKnown RBP6.79□□□□□ -1.32
GTF3C1-206ENST00000566779 MEF2BQ02080 365 aaPredicted RBP6.79□□□□□ -1.32
GTF3C1-206ENST00000566779 PIK3CD-AS1Q5SR53 167 aa6.79□□□□□ -1.32
GTF3C1-206ENST00000566779 DNLZQ5SXM8 178 aa6.79□□□□□ -1.32
GTF3C1-206ENST00000566779 DAZ4Q86SG3 579 aaKnown RBP6.79□□□□□ -1.32
GTF3C1-206ENST00000566779 OR2D3Q8NGH3 330 aa6.79□□□□□ -1.32
GTF3C1-206ENST00000566779 RPL36ALQ969Q0 106 aaKnown RBP6.79□□□□□ -1.32
GTF3C1-206ENST00000566779 KRTAP4-5Q9BYR2 181 aa6.79□□□□□ -1.32
GTF3C1-206ENST00000566779 SCRT2Q9NQ03 307 aa6.79□□□□□ -1.32
GTF3C1-206ENST00000566779 DAZ3Q9NR90 486 aaKnown RBP6.79□□□□□ -1.32
GTF3C1-206ENST00000566779 MED9Q9NWA0 146 aa6.79□□□□□ -1.32
GTF3C1-206ENST00000566779 IGLV5-52A0A0A0MRZ9 124 aa6.78□□□□□ -1.32
GTF3C1-206ENST00000566779 IBA57-AS1B1ANH7 110 aa6.78□□□□□ -1.32
GTF3C1-206ENST00000566779 C1QBP02746 253 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms