RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 SH2D1AO60880 128 aa9.89□□□□□ -0.83
RNF40-209ENST00000566703 FHITP49789 147 aa9.89□□□□□ -0.83
RNF40-209ENST00000566703 ELOBQ15370 118 aa9.89□□□□□ -0.83
RNF40-209ENST00000566703 AKR1C8PQ5T2L2 129 aa9.89□□□□□ -0.83
RNF40-209ENST00000566703 NIT1Q86X76 327 aa9.89□□□□□ -0.83
RNF40-209ENST00000566703 Q8N976 141 aa9.89□□□□□ -0.83
RNF40-209ENST00000566703 ZC2HC1AQ96GY0 325 aa9.89□□□□□ -0.83
RNF40-209ENST00000566703 FMC1Q96HJ9 113 aa9.89□□□□□ -0.83
RNF40-209ENST00000566703 PHLDA3Q9Y5J5 127 aa9.89□□□□□ -0.83
RNF40-209ENST00000566703 FXYD6-FXYD2A0A087WZ82 144 aa9.88□□□□□ -0.83
RNF40-209ENST00000566703 TPT1P13693 172 aaKnown RBP9.88□□□□□ -0.83
RNF40-209ENST00000566703 ZNF674Q2M3X9 581 aa9.88□□□□□ -0.83
RNF40-209ENST00000566703 BAALCQ8WXS3 180 aa9.88□□□□□ -0.83
RNF40-209ENST00000566703 GRIFINA4D1Z8 144 aa9.87□□□□□ -0.83
RNF40-209ENST00000566703 M0R036 132 aa9.87□□□□□ -0.83
RNF40-209ENST00000566703 UBE2G1P62253 170 aa9.87□□□□□ -0.83
RNF40-209ENST00000566703 LINC01559Q495D7 138 aa9.87□□□□□ -0.83
RNF40-209ENST00000566703 FAM74A4Q5TZK3 123 aa9.87□□□□□ -0.83
RNF40-209ENST00000566703 ZFP82Q8N141 532 aa9.87□□□□□ -0.83
RNF40-209ENST00000566703 STOML3Q8TAV4 291 aa9.87□□□□□ -0.83
RNF40-209ENST00000566703 J3QL48 77 aa9.86□□□□□ -0.83
RNF40-209ENST00000566703 LECT2O14960 151 aa9.86□□□□□ -0.83
RNF40-209ENST00000566703 RPL36AP83881 106 aaKnown RBP9.86□□□□□ -0.83
RNF40-209ENST00000566703 ATRAIDQ6UW56 229 aa9.86□□□□□ -0.83
RNF40-209ENST00000566703 RPL36ALQ969Q0 106 aaKnown RBP9.86□□□□□ -0.83
RNF40-209ENST00000566703 KLK12Q9UKR0 248 aa9.86□□□□□ -0.83
RNF40-209ENST00000566703 DMBT1Q9UGM3 2413 aaPredicted RBP9.85□□□□□ -0.83
RNF40-209ENST00000566703 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.85□□□□□ -0.83
RNF40-209ENST00000566703 TRBV7-3A0A075B6L6 115 aa9.85□□□□□ -0.83
RNF40-209ENST00000566703 A0A087WWL8 130 aa9.85□□□□□ -0.83
RNF40-209ENST00000566703 A0A087WX48 190 aa9.85□□□□□ -0.83
RNF40-209ENST00000566703 MAP1LC3B2A6NCE7 125 aa9.85□□□□□ -0.83
RNF40-209ENST00000566703 RBFOX3A6NFN3 312 aa9.85□□□□□ -0.83
RNF40-209ENST00000566703 M0R381 172 aa9.85□□□□□ -0.83
RNF40-209ENST00000566703 LTAP01374 205 aa9.85□□□□□ -0.83
RNF40-209ENST00000566703 Q0VG73 95 aa9.85□□□□□ -0.83
RNF40-209ENST00000566703 KCNIP4Q6PIL6 250 aa9.85□□□□□ -0.83
RNF40-209ENST00000566703 DEFB104AQ8WTQ1 72 aa9.85□□□□□ -0.83
RNF40-209ENST00000566703 MAP1LC3BQ9GZQ8 125 aa9.85□□□□□ -0.83
RNF40-209ENST00000566703 FLG2Q5D862 2391 aaPredicted RBP9.84□□□□□ -0.83
RNF40-209ENST00000566703 IGKV2D-24A0A075B6R9 120 aa9.84□□□□□ -0.83
RNF40-209ENST00000566703 S100A9P06702 114 aaKnown RBP9.84□□□□□ -0.83
RNF40-209ENST00000566703 UBE2D3P61077 147 aa9.84□□□□□ -0.83
RNF40-209ENST00000566703 UBE2D2P62837 147 aa9.84□□□□□ -0.83
RNF40-209ENST00000566703 LINC00528Q8N1L1 170 aa9.84□□□□□ -0.83
RNF40-209ENST00000566703 OR10G8Q8NGN5 311 aa9.84□□□□□ -0.83
RNF40-209ENST00000566703 UBE2WQ96B02 151 aa9.84□□□□□ -0.83
RNF40-209ENST00000566703 CYTL1Q9NRR1 136 aa9.84□□□□□ -0.83
RNF40-209ENST00000566703 KRTAP29-1A8MX34 341 aaPredicted RBP9.83□□□□□ -0.84
RNF40-209ENST00000566703 CXCL1P09341 107 aa9.83□□□□□ -0.84
RNF40-209ENST00000566703 RAB4BP61018 213 aa9.83□□□□□ -0.84
RNF40-209ENST00000566703 CST9LP1Q5W188 147 aa9.83□□□□□ -0.84
RNF40-209ENST00000566703 HERC1Q15751 4861 aa9.83□□□□□ -0.84
RNF40-209ENST00000566703 TMSB15BA0A087X1C1 80 aa9.82□□□□□ -0.84
RNF40-209ENST00000566703 G3V3Q6 166 aa9.82□□□□□ -0.84
RNF40-209ENST00000566703 AKR1C3P42330 323 aa9.82□□□□□ -0.84
RNF40-209ENST00000566703 C14orf177Q52M58 125 aa9.82□□□□□ -0.84
RNF40-209ENST00000566703 CHAC1Q9BUX1 264 aa9.82□□□□□ -0.84
RNF40-209ENST00000566703 VPS13BQ7Z7G8 4022 aa9.82□□□□□ -0.84
RNF40-209ENST00000566703 TRBV6-8A0A0A6YYG3 113 aa9.81□□□□□ -0.84
RNF40-209ENST00000566703 SCXQ7RTU7 201 aa9.81□□□□□ -0.84
RNF40-209ENST00000566703 DNAJC30Q96LL9 226 aa9.81□□□□□ -0.84
RNF40-209ENST00000566703 TMEM262E9PQX1 116 aa9.8□□□□□ -0.84
RNF40-209ENST00000566703 ARPC5O15511 151 aa9.8□□□□□ -0.84
RNF40-209ENST00000566703 PAGE4O60829 102 aa9.8□□□□□ -0.84
RNF40-209ENST00000566703 PKIAP61925 76 aa9.8□□□□□ -0.84
RNF40-209ENST00000566703 PRR27Q6MZM9 219 aa9.8□□□□□ -0.84
RNF40-209ENST00000566703 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.8□□□□□ -0.84
RNF40-209ENST00000566703 MBD3L1Q8WWY6 194 aa9.8□□□□□ -0.84
RNF40-209ENST00000566703 SSBP4Q9BWG4 385 aaPredicted RBP9.8□□□□□ -0.84
RNF40-209ENST00000566703 ZNF471Q9BX82 626 aaPredicted RBP9.8□□□□□ -0.84
RNF40-209ENST00000566703 LINC01620Q4KN68 170 aa9.79□□□□□ -0.84
RNF40-209ENST00000566703 TMEM97Q5BJF2 176 aa9.79□□□□□ -0.84
RNF40-209ENST00000566703 MLST8Q9BVC4 326 aa9.79□□□□□ -0.84
RNF40-209ENST00000566703 C1orf43Q9BWL3 253 aa9.79□□□□□ -0.84
RNF40-209ENST00000566703 UMAD1C9J7I0 102 aa9.78□□□□□ -0.84
RNF40-209ENST00000566703 SNAI2O43623 268 aa9.78□□□□□ -0.84
RNF40-209ENST00000566703 OR5AL1P0C617 328 aa9.78□□□□□ -0.84
RNF40-209ENST00000566703 ENHOQ6UWT2 76 aa9.78□□□□□ -0.84
RNF40-209ENST00000566703 BAGE2Q86Y30 109 aa9.78□□□□□ -0.84
RNF40-209ENST00000566703 NEXN-AS1Q8NBZ9 246 aa9.78□□□□□ -0.84
RNF40-209ENST00000566703 SFT2D1Q8WV19 159 aa9.78□□□□□ -0.84
RNF40-209ENST00000566703 SRRM2Q9UQ35 2752 aaKnown RBP9.78□□□□□ -0.84
RNF40-209ENST00000566703 KCNRGQ8N5I3 272 aa9.77□□□□□ -0.85
RNF40-209ENST00000566703 OR10AG1Q8NH19 301 aa9.77□□□□□ -0.85
RNF40-209ENST00000566703 CIRBP-AS1Q8TBR5 109 aa9.77□□□□□ -0.85
RNF40-209ENST00000566703 PFDN1O60925 122 aa9.76□□□□□ -0.85
RNF40-209ENST00000566703 IGLV2-8P01709 118 aa9.76□□□□□ -0.85
RNF40-209ENST00000566703 CRPP02741 224 aa9.76□□□□□ -0.85
RNF40-209ENST00000566703 ZNF345Q14585 488 aa9.76□□□□□ -0.85
RNF40-209ENST00000566703 ZNF56Q15929 161 aa9.76□□□□□ -0.85
RNF40-209ENST00000566703 SPANXN1Q5VSR9 72 aa9.76□□□□□ -0.85
RNF40-209ENST00000566703 VAX2Q9UIW0 290 aa9.76□□□□□ -0.85
RNF40-209ENST00000566703 DNAH8Q96JB1 4490 aa9.76□□□□□ -0.85
RNF40-209ENST00000566703 ANGP03950 147 aaKnown RBP9.75□□□□□ -0.85
RNF40-209ENST00000566703 RPL19P84098 196 aaKnown RBP9.75□□□□□ -0.85
RNF40-209ENST00000566703 MIAQ16674 131 aa9.75□□□□□ -0.85
RNF40-209ENST00000566703 DGAT2L7PQ6IED9 249 aa9.75□□□□□ -0.85
RNF40-209ENST00000566703 TMUB2Q71RG4 321 aa9.75□□□□□ -0.85
RNF40-209ENST00000566703 C15orf54Q8N8G6 183 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms