RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 PHLDA3Q9Y5J5 127 aa10.1□□□□□ -0.79
CMTM3-212ENST00000566121 IGLV5-52A0A0A0MRZ9 124 aa10.09□□□□□ -0.79
CMTM3-212ENST00000566121 H3BVH4 76 aa10.09□□□□□ -0.79
CMTM3-212ENST00000566121 ZFP82Q8N141 532 aa10.09□□□□□ -0.79
CMTM3-212ENST00000566121 OR10G8Q8NGN5 311 aa10.09□□□□□ -0.79
CMTM3-212ENST00000566121 SSBP4Q9BWG4 385 aaPredicted RBP10.09□□□□□ -0.79
CMTM3-212ENST00000566121 JPT2Q9H910 190 aa10.09□□□□□ -0.79
CMTM3-212ENST00000566121 GAGE12JA6NER3 117 aa10.08□□□□□ -0.8
CMTM3-212ENST00000566121 TPT1P13693 172 aaKnown RBP10.08□□□□□ -0.8
CMTM3-212ENST00000566121 EIF5AP63241 154 aaKnown RBP10.08□□□□□ -0.8
CMTM3-212ENST00000566121 GAGE1Q13065 139 aa10.08□□□□□ -0.8
CMTM3-212ENST00000566121 GAGE4Q13068 117 aa10.08□□□□□ -0.8
CMTM3-212ENST00000566121 GAGE5Q13069 117 aa10.08□□□□□ -0.8
CMTM3-212ENST00000566121 GAGE13Q4V321 117 aa10.08□□□□□ -0.8
CMTM3-212ENST00000566121 C14orf178Q8N769 122 aaPredicted RBP10.08□□□□□ -0.8
CMTM3-212ENST00000566121 FRZBQ92765 325 aa10.08□□□□□ -0.8
CMTM3-212ENST00000566121 IGHV3-30P01768 117 aa10.07□□□□□ -0.8
CMTM3-212ENST00000566121 IGHV3-33P01772 117 aa10.07□□□□□ -0.8
CMTM3-212ENST00000566121 IGHV3-30-3P0DP02 117 aa10.07□□□□□ -0.8
CMTM3-212ENST00000566121 IGHV3-30-5P0DP03 117 aa10.07□□□□□ -0.8
CMTM3-212ENST00000566121 CST9LP1Q5W188 147 aa10.07□□□□□ -0.8
CMTM3-212ENST00000566121 NIT1Q86X76 327 aa10.07□□□□□ -0.8
CMTM3-212ENST00000566121 Q9UF83 564 aa10.07□□□□□ -0.8
CMTM3-212ENST00000566121 PAGE4O60829 102 aa10.06□□□□□ -0.8
CMTM3-212ENST00000566121 OR5AL1P0C617 328 aa10.06□□□□□ -0.8
CMTM3-212ENST00000566121 FUSP35637 526 aaKnown RBP eCLIP10.06□□□□□ -0.8
CMTM3-212ENST00000566121 AKR1C3P42330 323 aa10.06□□□□□ -0.8
CMTM3-212ENST00000566121 RAB4BP61018 213 aa10.06□□□□□ -0.8
CMTM3-212ENST00000566121 ELOBQ15370 118 aa10.06□□□□□ -0.8
CMTM3-212ENST00000566121 PRR27Q6MZM9 219 aa10.06□□□□□ -0.8
CMTM3-212ENST00000566121 ATRAIDQ6UW56 229 aa10.06□□□□□ -0.8
CMTM3-212ENST00000566121 Q6ZSA8 131 aa10.06□□□□□ -0.8
CMTM3-212ENST00000566121 SFT2D1Q8WV19 159 aa10.06□□□□□ -0.8
CMTM3-212ENST00000566121 RMI2Q96E14 147 aa10.06□□□□□ -0.8
CMTM3-212ENST00000566121 TRBV7-3A0A075B6L6 115 aa10.05□□□□□ -0.8
CMTM3-212ENST00000566121 TRAV1-1A0A0B4J248 108 aa10.05□□□□□ -0.8
CMTM3-212ENST00000566121 M0R036 132 aa10.05□□□□□ -0.8
CMTM3-212ENST00000566121 SNAI2O43623 268 aa10.05□□□□□ -0.8
CMTM3-212ENST00000566121 INAFM2P0DMQ5 153 aa10.05□□□□□ -0.8
CMTM3-212ENST00000566121 UBE2D3P61077 147 aa10.05□□□□□ -0.8
CMTM3-212ENST00000566121 UBE2D2P62837 147 aa10.05□□□□□ -0.8
CMTM3-212ENST00000566121 Q5VSD8 79 aa10.05□□□□□ -0.8
CMTM3-212ENST00000566121 Q9HAA7 133 aa10.05□□□□□ -0.8
CMTM3-212ENST00000566121 GRIFINA4D1Z8 144 aa10.04□□□□□ -0.8
CMTM3-212ENST00000566121 FAM229AH3BQW9 127 aa10.04□□□□□ -0.8
CMTM3-212ENST00000566121 BCL2L11O43521 198 aa10.04□□□□□ -0.8
CMTM3-212ENST00000566121 RPL36AP83881 106 aaKnown RBP10.04□□□□□ -0.8
CMTM3-212ENST00000566121 DAZ4Q86SG3 579 aaKnown RBP10.04□□□□□ -0.8
CMTM3-212ENST00000566121 RPL36ALQ969Q0 106 aaKnown RBP10.04□□□□□ -0.8
CMTM3-212ENST00000566121 DAZ3Q9NR90 486 aaKnown RBP10.04□□□□□ -0.8
CMTM3-212ENST00000566121 FLG2Q5D862 2391 aaPredicted RBP10.03□□□□□ -0.8
CMTM3-212ENST00000566121 H2AFB1P0C5Y9 115 aa10.03□□□□□ -0.8
CMTM3-212ENST00000566121 RAB5CP51148 216 aa10.03□□□□□ -0.8
CMTM3-212ENST00000566121 TMUB2Q71RG4 321 aa10.03□□□□□ -0.8
CMTM3-212ENST00000566121 BAGE2Q86Y30 109 aa10.03□□□□□ -0.8
CMTM3-212ENST00000566121 Q8N976 141 aa10.03□□□□□ -0.8
CMTM3-212ENST00000566121 KANTRA0A1W2PQU2 76 aa10.02□□□□□ -0.81
CMTM3-212ENST00000566121 M0R381 172 aa10.02□□□□□ -0.81
CMTM3-212ENST00000566121 PFDN1O60925 122 aa10.02□□□□□ -0.81
CMTM3-212ENST00000566121 PKIAP61925 76 aa10.02□□□□□ -0.81
CMTM3-212ENST00000566121 Q0VG73 95 aa10.02□□□□□ -0.81
CMTM3-212ENST00000566121 TMEM97Q5BJF2 176 aa10.02□□□□□ -0.81
CMTM3-212ENST00000566121 FAM213BQ8TBF2 198 aa10.02□□□□□ -0.81
CMTM3-212ENST00000566121 C11orf52Q96A22 123 aa10.02□□□□□ -0.81
CMTM3-212ENST00000566121 SMIM12Q96EX1 92 aa10.02□□□□□ -0.81
CMTM3-212ENST00000566121 URGCP-MRPS24S4R325 110 aa10.02□□□□□ -0.81
CMTM3-212ENST00000566121 A0A087WWL8 130 aa10.01□□□□□ -0.81
CMTM3-212ENST00000566121 FAM74A4Q5TZK3 123 aa10.01□□□□□ -0.81
CMTM3-212ENST00000566121 ZNF471Q9BX82 626 aaPredicted RBP10.01□□□□□ -0.81
CMTM3-212ENST00000566121 MANBALQ9NQG1 85 aa10.01□□□□□ -0.81
CMTM3-212ENST00000566121 VAX2Q9UIW0 290 aa10.01□□□□□ -0.81
CMTM3-212ENST00000566121 A0A087WX48 190 aa10□□□□□ -0.81
CMTM3-212ENST00000566121 TRBV6-8A0A0A6YYG3 113 aa10□□□□□ -0.81
CMTM3-212ENST00000566121 SMLR1H3BR10 107 aa10□□□□□ -0.81
CMTM3-212ENST00000566121 EIF5AL1Q6IS14 154 aaKnown RBP10□□□□□ -0.81
CMTM3-212ENST00000566121 Q8N3U1 123 aa10□□□□□ -0.81
CMTM3-212ENST00000566121 KIF25-AS1Q9Y6Z4 181 aa10□□□□□ -0.81
CMTM3-212ENST00000566121 TMSB15BA0A087X1C1 80 aa9.99□□□□□ -0.81
CMTM3-212ENST00000566121 SCO2A0A1W2PP80 73 aa9.99□□□□□ -0.81
CMTM3-212ENST00000566121 WFDC2Q14508 124 aa9.99□□□□□ -0.81
CMTM3-212ENST00000566121 KCNIP4Q6PIL6 250 aa9.99□□□□□ -0.81
CMTM3-212ENST00000566121 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.99□□□□□ -0.81
CMTM3-212ENST00000566121 FAM30AQ9NZY2 134 aa9.99□□□□□ -0.81
CMTM3-212ENST00000566121 RPL35P42766 123 aaKnown RBP9.98□□□□□ -0.81
CMTM3-212ENST00000566121 NEXN-AS1Q8NBZ9 246 aa9.98□□□□□ -0.81
CMTM3-212ENST00000566121 OR10AG1Q8NH19 301 aa9.98□□□□□ -0.81
CMTM3-212ENST00000566121 TEX46H3BTG2 121 aa9.97□□□□□ -0.81
CMTM3-212ENST00000566121 SMR3BP02814 79 aaPredicted RBP9.97□□□□□ -0.81
CMTM3-212ENST00000566121 RPS20P60866 119 aaKnown RBP9.97□□□□□ -0.81
CMTM3-212ENST00000566121 Q6ZNX1 250 aa9.97□□□□□ -0.81
CMTM3-212ENST00000566121 KLK12Q9UKR0 248 aa9.97□□□□□ -0.81
CMTM3-212ENST00000566121 RBFOX3A6NFN3 312 aa9.96□□□□□ -0.82
CMTM3-212ENST00000566121 C14orf177Q52M58 125 aa9.96□□□□□ -0.82
CMTM3-212ENST00000566121 SPANXN1Q5VSR9 72 aa9.96□□□□□ -0.82
CMTM3-212ENST00000566121 DNAJC30Q96LL9 226 aa9.96□□□□□ -0.82
CMTM3-212ENST00000566121 C19orf71A6NCJ1 209 aa9.95□□□□□ -0.82
CMTM3-212ENST00000566121 IGLV2-8P01709 118 aa9.95□□□□□ -0.82
CMTM3-212ENST00000566121 IGLC6P0CF74 106 aa9.95□□□□□ -0.82
CMTM3-212ENST00000566121 CCL20P78556 96 aa9.95□□□□□ -0.82
CMTM3-212ENST00000566121 RPL19P84098 196 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms