RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 ZNF492Q9P255 531 aa5.2□□□□□ -1.58
SMPD3-206ENST00000566009 SMLR1H3BR10 107 aa5.19□□□□□ -1.58
SMPD3-206ENST00000566009 CST7O76096 145 aa5.19□□□□□ -1.58
SMPD3-206ENST00000566009 S100A11P31949 105 aa5.19□□□□□ -1.58
SMPD3-206ENST00000566009 CAV2P51636 162 aa5.19□□□□□ -1.58
SMPD3-206ENST00000566009 SLC38A11Q08AI6 406 aa5.19□□□□□ -1.58
SMPD3-206ENST00000566009 ATP6V1FQ16864 119 aa5.19□□□□□ -1.58
SMPD3-206ENST00000566009 Q6ZRG5 221 aa5.19□□□□□ -1.58
SMPD3-206ENST00000566009 OR2T35Q8NGX2 323 aa5.19□□□□□ -1.58
SMPD3-206ENST00000566009 C11orf1Q9H5F2 150 aa5.19□□□□□ -1.58
SMPD3-206ENST00000566009 CAMLGP49069 296 aa5.18□□□□□ -1.58
SMPD3-206ENST00000566009 RAB32Q13637 225 aa5.18□□□□□ -1.58
SMPD3-206ENST00000566009 ZNF266Q14584 549 aa5.18□□□□□ -1.58
SMPD3-206ENST00000566009 TMEM78Q5T7P6 136 aa5.18□□□□□ -1.58
SMPD3-206ENST00000566009 C10orf113Q5VZT2 155 aa5.18□□□□□ -1.58
SMPD3-206ENST00000566009 PRR27Q6MZM9 219 aa5.18□□□□□ -1.58
SMPD3-206ENST00000566009 LINC00173Q6ZV60 143 aa5.18□□□□□ -1.58
SMPD3-206ENST00000566009 LINC00305Q7Z4B0 112 aa5.18□□□□□ -1.58
SMPD3-206ENST00000566009 TCTE3Q8IZS6 198 aa5.18□□□□□ -1.58
SMPD3-206ENST00000566009 LINC00337Q8N6G1 96 aa5.18□□□□□ -1.58
SMPD3-206ENST00000566009 TMEM252Q8N6L7 170 aa5.18□□□□□ -1.58
SMPD3-206ENST00000566009 RPP21Q9H633 154 aaKnown RBP5.18□□□□□ -1.58
SMPD3-206ENST00000566009 SLC39A9Q9NUM3 307 aa5.18□□□□□ -1.58
SMPD3-206ENST00000566009 NAGKQ9UJ70 344 aa5.18□□□□□ -1.58
SMPD3-206ENST00000566009 IGKV2-40A0A087WW87 121 aaPredicted RBP5.17□□□□□ -1.58
SMPD3-206ENST00000566009 A0A1W2PNN7 141 aa5.17□□□□□ -1.58
SMPD3-206ENST00000566009 G3V3Q6 166 aa5.17□□□□□ -1.58
SMPD3-206ENST00000566009 IGKV2D-40P01614 121 aaPredicted RBP5.17□□□□□ -1.58
SMPD3-206ENST00000566009 RPL29P47914 159 aaKnown RBP5.17□□□□□ -1.58
SMPD3-206ENST00000566009 SULT1A1P50225 295 aa5.17□□□□□ -1.58
SMPD3-206ENST00000566009 S100A10P60903 97 aa5.17□□□□□ -1.58
SMPD3-206ENST00000566009 HBG1P69891 147 aa5.17□□□□□ -1.58
SMPD3-206ENST00000566009 HBG2P69892 147 aa5.17□□□□□ -1.58
SMPD3-206ENST00000566009 NHLH2Q02577 135 aa5.17□□□□□ -1.58
SMPD3-206ENST00000566009 ZFP69Q49AA0 526 aa5.17□□□□□ -1.58
SMPD3-206ENST00000566009 MIC13Q5XKP0 118 aa5.17□□□□□ -1.58
SMPD3-206ENST00000566009 LINC00269Q8N2A0 174 aa5.17□□□□□ -1.58
SMPD3-206ENST00000566009 MGST2Q99735 147 aa5.17□□□□□ -1.58
SMPD3-206ENST00000566009 LYRM2Q9NU23 88 aaPredicted RBP5.17□□□□□ -1.58
SMPD3-206ENST00000566009 UQCC1Q9NVA1 299 aa5.17□□□□□ -1.58
SMPD3-206ENST00000566009 WDR83OSQ9Y284 106 aa5.17□□□□□ -1.58
SMPD3-206ENST00000566009 DIRC3C9JPN6 131 aa5.16□□□□□ -1.58
SMPD3-206ENST00000566009 COX7A2P2O60397 106 aa5.16□□□□□ -1.58
SMPD3-206ENST00000566009 SIX6O95475 246 aa5.16□□□□□ -1.58
SMPD3-206ENST00000566009 Q6AWC8 147 aa5.16□□□□□ -1.58
SMPD3-206ENST00000566009 STX12Q86Y82 276 aa5.16□□□□□ -1.58
SMPD3-206ENST00000566009 C14orf178Q8N769 122 aaPredicted RBP5.16□□□□□ -1.58
SMPD3-206ENST00000566009 OR11H4Q8NGC9 324 aa5.16□□□□□ -1.58
SMPD3-206ENST00000566009 OR10G7Q8NGN6 311 aa5.16□□□□□ -1.58
SMPD3-206ENST00000566009 OR1L4Q8NGR5 311 aa5.16□□□□□ -1.58
SMPD3-206ENST00000566009 ATP5SQ99766 215 aa5.16□□□□□ -1.58
SMPD3-206ENST00000566009 NMES1Q9C002 83 aa5.16□□□□□ -1.58
SMPD3-206ENST00000566009 PRELID1Q9Y255 219 aa5.16□□□□□ -1.58
SMPD3-206ENST00000566009 TRBV7-9A0A0J9YWB2 115 aa5.15□□□□□ -1.59
SMPD3-206ENST00000566009 IGSF23A1L1A6 192 aa5.15□□□□□ -1.59
SMPD3-206ENST00000566009 ATP6V1G1O75348 118 aa5.15□□□□□ -1.59
SMPD3-206ENST00000566009 TYMSP04818 313 aa5.15□□□□□ -1.59
SMPD3-206ENST00000566009 HIST1H1EP10412 219 aaKnown RBP5.15□□□□□ -1.59
SMPD3-206ENST00000566009 AMTP48728 403 aa5.15□□□□□ -1.59
SMPD3-206ENST00000566009 EIF5AP63241 154 aaKnown RBP5.15□□□□□ -1.59
SMPD3-206ENST00000566009 BAXQ07812 192 aa5.15□□□□□ -1.59
SMPD3-206ENST00000566009 C15orf56Q8N910 161 aa5.15□□□□□ -1.59
SMPD3-206ENST00000566009 OR2G3Q8NGZ4 309 aa5.15□□□□□ -1.59
SMPD3-206ENST00000566009 PFDN5Q99471 154 aa5.15□□□□□ -1.59
SMPD3-206ENST00000566009 MED28Q9H204 178 aa5.15□□□□□ -1.59
SMPD3-206ENST00000566009 PGPEP1LA6NFU8 196 aa5.14□□□□□ -1.59
SMPD3-206ENST00000566009 GZMBP10144 247 aa5.14□□□□□ -1.59
SMPD3-206ENST00000566009 FGF7P21781 194 aa5.14□□□□□ -1.59
SMPD3-206ENST00000566009 RAB5CP51148 216 aa5.14□□□□□ -1.59
SMPD3-206ENST00000566009 HIGD2BQ4VC39 106 aa5.14□□□□□ -1.59
SMPD3-206ENST00000566009 SLC7A5P1Q8MH63 180 aa5.14□□□□□ -1.59
SMPD3-206ENST00000566009 C9orf62Q8N4C0 152 aa5.14□□□□□ -1.59
SMPD3-206ENST00000566009 OR5C1Q8NGR4 320 aa5.14□□□□□ -1.59
SMPD3-206ENST00000566009 KCNS1Q96KK3 526 aa5.14□□□□□ -1.59
SMPD3-206ENST00000566009 TRBV6-8A0A0A6YYG3 113 aa5.13□□□□□ -1.59
SMPD3-206ENST00000566009 UBE2L5PA0A1B0GUS4 154 aa5.13□□□□□ -1.59
SMPD3-206ENST00000566009 H0YIZ8 118 aa5.13□□□□□ -1.59
SMPD3-206ENST00000566009 SSNA1O43805 119 aa5.13□□□□□ -1.59
SMPD3-206ENST00000566009 EIF3GO75821 320 aaKnown RBP eCLIP5.13□□□□□ -1.59
SMPD3-206ENST00000566009 H2BFSP57053 126 aa5.13□□□□□ -1.59
SMPD3-206ENST00000566009 LRRC37A5PQ49AS3 106 aa5.13□□□□□ -1.59
SMPD3-206ENST00000566009 ZFP2Q6ZN57 461 aa5.13□□□□□ -1.59
SMPD3-206ENST00000566009 PHF5AQ7RTV0 110 aaKnown RBP5.13□□□□□ -1.59
SMPD3-206ENST00000566009 EXOC3-AS1Q8N2X6 119 aa5.13□□□□□ -1.59
SMPD3-206ENST00000566009 TYMSOSQ8TAI1 123 aa5.13□□□□□ -1.59
SMPD3-206ENST00000566009 PPP1R1CQ8WVI7 109 aa5.13□□□□□ -1.59
SMPD3-206ENST00000566009 PARLQ9H300 379 aa5.13□□□□□ -1.59
SMPD3-206ENST00000566009 OR5AC2Q9NZP5 309 aa5.13□□□□□ -1.59
SMPD3-206ENST00000566009 TRBV19A0A075B6N1 114 aa5.12□□□□□ -1.59
SMPD3-206ENST00000566009 C17orf112F2Z3M2 114 aa5.12□□□□□ -1.59
SMPD3-206ENST00000566009 NDUFB4O95168 129 aa5.12□□□□□ -1.59
SMPD3-206ENST00000566009 MPC2O95563 127 aa5.12□□□□□ -1.59
SMPD3-206ENST00000566009 REG3AQ06141 175 aa5.12□□□□□ -1.59
SMPD3-206ENST00000566009 SS18Q15532 418 aa5.12□□□□□ -1.59
SMPD3-206ENST00000566009 LGALSLQ3ZCW2 172 aaPredicted RBP5.12□□□□□ -1.59
SMPD3-206ENST00000566009 ZNF506Q5JVG8 444 aa5.12□□□□□ -1.59
SMPD3-206ENST00000566009 CFAP161Q6P656 301 aa5.12□□□□□ -1.59
SMPD3-206ENST00000566009 NPCDR1Q9BY65 106 aa5.12□□□□□ -1.59
SMPD3-206ENST00000566009 TMEM14CQ9P0S9 112 aa5.12□□□□□ -1.59
SMPD3-206ENST00000566009 PKIGQ9Y2B9 76 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms