RNA–Protein interactions for RNA: ENST00000565931.1

RNF40-207, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-207ENST00000565931 RNF212Q495C1 297 aa11.65□□□□□ -0.54
RNF40-207ENST00000565931 A0A087WWL8 130 aa11.64□□□□□ -0.55
RNF40-207ENST00000565931 SMIM27A0A1W2PRY6 76 aa11.64□□□□□ -0.55
RNF40-207ENST00000565931 HIGD1CA8MV81 97 aa11.64□□□□□ -0.55
RNF40-207ENST00000565931 RHODO00212 210 aa11.64□□□□□ -0.55
RNF40-207ENST00000565931 PPP1R2P9O14990 202 aa11.64□□□□□ -0.55
RNF40-207ENST00000565931 MT-ND4LP03901 98 aa11.64□□□□□ -0.55
RNF40-207ENST00000565931 H3BNG1 76 aa11.63□□□□□ -0.55
RNF40-207ENST00000565931 PAX4O43316 350 aa11.63□□□□□ -0.55
RNF40-207ENST00000565931 SLC7A5P1Q8MH63 180 aa11.63□□□□□ -0.55
RNF40-207ENST00000565931 NUP35Q8NFH5 326 aa11.63□□□□□ -0.55
RNF40-207ENST00000565931 ANAPC16Q96DE5 110 aa11.63□□□□□ -0.55
RNF40-207ENST00000565931 AP1S3Q96PC3 154 aa11.63□□□□□ -0.55
RNF40-207ENST00000565931 KIF25-AS1Q9Y6Z4 181 aa11.63□□□□□ -0.55
RNF40-207ENST00000565931 FAM74A4Q5TZK3 123 aa11.62□□□□□ -0.55
RNF40-207ENST00000565931 Q6ZSN1 163 aa11.62□□□□□ -0.55
RNF40-207ENST00000565931 C14orf178Q8N769 122 aaPredicted RBP11.62□□□□□ -0.55
RNF40-207ENST00000565931 C15orf53Q8NAA6 179 aa11.62□□□□□ -0.55
RNF40-207ENST00000565931 NAT8BQ9UHF3 227 aa11.62□□□□□ -0.55
RNF40-207ENST00000565931 PLECQ15149 4684 aaKnown RBP11.62□□□□□ -0.55
RNF40-207ENST00000565931 CSMD3Q7Z407 3707 aa11.61□□□□□ -0.55
RNF40-207ENST00000565931 TRBV6-4A0A1B0GX49 114 aa11.61□□□□□ -0.55
RNF40-207ENST00000565931 TRGC1P0CF51 173 aa11.61□□□□□ -0.55
RNF40-207ENST00000565931 LINC00315P59091 139 aa11.61□□□□□ -0.55
RNF40-207ENST00000565931 TWIST1Q15672 202 aa11.61□□□□□ -0.55
RNF40-207ENST00000565931 SLC25A29Q8N8R3 303 aa11.61□□□□□ -0.55
RNF40-207ENST00000565931 A0A1B0GUT8 65 aa11.6□□□□□ -0.55
RNF40-207ENST00000565931 NUDT3O95989 172 aa11.6□□□□□ -0.55
RNF40-207ENST00000565931 EVI2AP22794 236 aa11.6□□□□□ -0.55
RNF40-207ENST00000565931 BORCS7Q96B45 105 aa11.6□□□□□ -0.55
RNF40-207ENST00000565931 A0A096LPF7 62 aa11.59□□□□□ -0.55
RNF40-207ENST00000565931 SMIM17P0DL12 118 aa11.59□□□□□ -0.55
RNF40-207ENST00000565931 NDUFA5Q16718 116 aa11.59□□□□□ -0.55
RNF40-207ENST00000565931 CTDSP1Q9GZU7 261 aa11.59□□□□□ -0.55
RNF40-207ENST00000565931 LOC100131303A0A0U1RQF7 123 aa11.58□□□□□ -0.56
RNF40-207ENST00000565931 GYPEP15421 78 aa11.58□□□□□ -0.56
RNF40-207ENST00000565931 RAB4BP61018 213 aa11.58□□□□□ -0.56
RNF40-207ENST00000565931 RIGQ13278 110 aa11.58□□□□□ -0.56
RNF40-207ENST00000565931 RHOHQ15669 191 aa11.58□□□□□ -0.56
RNF40-207ENST00000565931 CLRN3Q8NCR9 226 aa11.58□□□□□ -0.56
RNF40-207ENST00000565931 PRADC1Q9BSG0 188 aa11.58□□□□□ -0.56
RNF40-207ENST00000565931 C7orf77A4D0Y5 90 aa11.57□□□□□ -0.56
RNF40-207ENST00000565931 K7EQD1 137 aa11.57□□□□□ -0.56
RNF40-207ENST00000565931 APOC3P02656 99 aa11.57□□□□□ -0.56
RNF40-207ENST00000565931 DPH3P1Q9H4G8 78 aa11.57□□□□□ -0.56
RNF40-207ENST00000565931 ICOSQ9Y6W8 199 aa11.57□□□□□ -0.56
RNF40-207ENST00000565931 FAM3BP58499 235 aaPredicted RBP11.56□□□□□ -0.56
RNF40-207ENST00000565931 ZNF56Q15929 161 aa11.56□□□□□ -0.56
RNF40-207ENST00000565931 MRPL23Q16540 153 aaKnown RBP11.56□□□□□ -0.56
RNF40-207ENST00000565931 Q9UF83 564 aa11.56□□□□□ -0.56
RNF40-207ENST00000565931 F5H697 171 aa11.55□□□□□ -0.56
RNF40-207ENST00000565931 MGPP08493 103 aa11.55□□□□□ -0.56
RNF40-207ENST00000565931 RHEBQ15382 184 aa11.55□□□□□ -0.56
RNF40-207ENST00000565931 SMIM15Q7Z3B0 74 aa11.55□□□□□ -0.56
RNF40-207ENST00000565931 A0A087WWC5 75 aa11.54□□□□□ -0.56
RNF40-207ENST00000565931 P0DMU3 169 aa11.54□□□□□ -0.56
RNF40-207ENST00000565931 FAM231AP0DMU4 169 aa11.54□□□□□ -0.56
RNF40-207ENST00000565931 FAM231CP0DMU5 169 aa11.54□□□□□ -0.56
RNF40-207ENST00000565931 LGALS9CQ6DKI2 356 aa11.54□□□□□ -0.56
RNF40-207ENST00000565931 SVBPQ8N300 66 aa11.54□□□□□ -0.56
RNF40-207ENST00000565931 IMMP2LQ96T52 175 aa11.54□□□□□ -0.56
RNF40-207ENST00000565931 TMEM191AQ9H0A3 160 aa11.54□□□□□ -0.56
RNF40-207ENST00000565931 TMEM242Q9NWH2 141 aa11.54□□□□□ -0.56
RNF40-207ENST00000565931 TRBV10-1A0A0K0K1A3 114 aa11.53□□□□□ -0.56
RNF40-207ENST00000565931 A0A1B0GW15 77 aa11.53□□□□□ -0.56
RNF40-207ENST00000565931 A0A1B0GXF2 115 aa11.53□□□□□ -0.56
RNF40-207ENST00000565931 GAGE12JA6NER3 117 aa11.53□□□□□ -0.56
RNF40-207ENST00000565931 SRIP30626 198 aa11.53□□□□□ -0.56
RNF40-207ENST00000565931 GAGE1Q13065 139 aa11.53□□□□□ -0.56
RNF40-207ENST00000565931 GAGE4Q13068 117 aa11.53□□□□□ -0.56
RNF40-207ENST00000565931 GAGE5Q13069 117 aa11.53□□□□□ -0.56
RNF40-207ENST00000565931 GAGE13Q4V321 117 aa11.53□□□□□ -0.56
RNF40-207ENST00000565931 SUMO4Q6EEV6 95 aa11.53□□□□□ -0.56
RNF40-207ENST00000565931 MRPL54Q6P161 138 aaKnown RBP11.53□□□□□ -0.56
RNF40-207ENST00000565931 LINC00476Q8WZB0 136 aa11.53□□□□□ -0.56
RNF40-207ENST00000565931 RPS10P5Q9NQ39 176 aa11.53□□□□□ -0.56
RNF40-207ENST00000565931 TENM2Q9NT68 2774 aa11.53□□□□□ -0.56
RNF40-207ENST00000565931 NACAE9PAV3 2078 aa11.52□□□□□ -0.57
RNF40-207ENST00000565931 M0QY20 66 aa11.52□□□□□ -0.57
RNF40-207ENST00000565931 SNAPINO95295 136 aa11.52□□□□□ -0.57
RNF40-207ENST00000565931 LINC00694P0DN24 101 aa11.52□□□□□ -0.57
RNF40-207ENST00000565931 ESRGQ1W209 222 aa11.52□□□□□ -0.57
RNF40-207ENST00000565931 NEGR1Q7Z3B1 354 aa11.52□□□□□ -0.57
RNF40-207ENST00000565931 LCE6AA0A183 80 aa11.51□□□□□ -0.57
RNF40-207ENST00000565931 CAMPP49913 170 aa11.51□□□□□ -0.57
RNF40-207ENST00000565931 SH2D6Q7Z4S9 175 aa11.51□□□□□ -0.57
RNF40-207ENST00000565931 ATP5L2Q7Z4Y8 100 aa11.51□□□□□ -0.57
RNF40-207ENST00000565931 RNF185Q96GF1 192 aa11.51□□□□□ -0.57
RNF40-207ENST00000565931 LY6G6CO95867 125 aa11.5□□□□□ -0.57
RNF40-207ENST00000565931 CCL18P55774 89 aa11.5□□□□□ -0.57
RNF40-207ENST00000565931 HBBP68871 147 aa11.5□□□□□ -0.57
RNF40-207ENST00000565931 KCNIP4Q6PIL6 250 aa11.5□□□□□ -0.57
RNF40-207ENST00000565931 LYPD5Q6UWN5 251 aa11.5□□□□□ -0.57
RNF40-207ENST00000565931 AMN1Q8IY45 258 aa11.5□□□□□ -0.57
RNF40-207ENST00000565931 GATD1Q8NB37 220 aa11.5□□□□□ -0.57
RNF40-207ENST00000565931 NEXN-AS1Q8NBZ9 246 aa11.5□□□□□ -0.57
RNF40-207ENST00000565931 ZNRF2Q8NHG8 242 aa11.5□□□□□ -0.57
RNF40-207ENST00000565931 BTF3L4Q96K17 158 aa11.5□□□□□ -0.57
RNF40-207ENST00000565931 LINC00588Q9Y4M8 146 aa11.5□□□□□ -0.57
RNF40-207ENST00000565931 H7C1H1 209 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms