RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 IFITM2Q01629 132 aa6.01□□□□□ -1.45
VPS9D1-205ENST00000565452 TOR2AQ5JU69 321 aa6.01□□□□□ -1.45
VPS9D1-205ENST00000565452 FAM162BQ5T6X4 162 aa6.01□□□□□ -1.45
VPS9D1-205ENST00000565452 C8orf49Q96NF6 230 aa6.01□□□□□ -1.45
VPS9D1-205ENST00000565452 SPXQ9BT56 116 aa6.01□□□□□ -1.45
VPS9D1-205ENST00000565452 SDF2L1Q9HCN8 221 aa6.01□□□□□ -1.45
VPS9D1-205ENST00000565452 IGLV2-8P01709 118 aa6□□□□□ -1.45
VPS9D1-205ENST00000565452 RPL37AP61513 92 aaKnown RBP6□□□□□ -1.45
VPS9D1-205ENST00000565452 DNLZQ5SXM8 178 aa6□□□□□ -1.45
VPS9D1-205ENST00000565452 PRR9Q5T870 116 aa6□□□□□ -1.45
VPS9D1-205ENST00000565452 Q6ZTI0 123 aa6□□□□□ -1.45
VPS9D1-205ENST00000565452 DAZAP1Q96EP5 407 aaKnown RBP6□□□□□ -1.45
VPS9D1-205ENST00000565452 PRO0255Q9UI72 69 aa6□□□□□ -1.45
VPS9D1-205ENST00000565452 HHLA3Q9XRX5 114 aa6□□□□□ -1.45
VPS9D1-205ENST00000565452 SRP19P09132 144 aaKnown RBP5.99□□□□□ -1.45
VPS9D1-205ENST00000565452 CXCL1P09341 107 aa5.99□□□□□ -1.45
VPS9D1-205ENST00000565452 ZNF80P51504 273 aaPredicted RBP5.99□□□□□ -1.45
VPS9D1-205ENST00000565452 TCL1AP56279 114 aa5.99□□□□□ -1.45
VPS9D1-205ENST00000565452 ZNF415Q09FC8 603 aa5.99□□□□□ -1.45
VPS9D1-205ENST00000565452 WFDC10BQ8IUB3 73 aa5.99□□□□□ -1.45
VPS9D1-205ENST00000565452 CIRBP-AS1Q8TBR5 109 aa5.99□□□□□ -1.45
VPS9D1-205ENST00000565452 ZC2HC1AQ96GY0 325 aa5.99□□□□□ -1.45
VPS9D1-205ENST00000565452 DERL1Q9BUN8 251 aa5.99□□□□□ -1.45
VPS9D1-205ENST00000565452 TM2D2Q9BX73 214 aa5.99□□□□□ -1.45
VPS9D1-205ENST00000565452 PARLQ9H300 379 aa5.99□□□□□ -1.45
VPS9D1-205ENST00000565452 XKRY2A2RUG3 117 aa5.98□□□□□ -1.45
VPS9D1-205ENST00000565452 ZNF727A8MUV8 499 aa5.98□□□□□ -1.45
VPS9D1-205ENST00000565452 IBA57-AS1B1ANH7 110 aa5.98□□□□□ -1.45
VPS9D1-205ENST00000565452 ORM1P02763 201 aa5.98□□□□□ -1.45
VPS9D1-205ENST00000565452 CRIP1P50238 77 aa5.98□□□□□ -1.45
VPS9D1-205ENST00000565452 LINC01559Q495D7 138 aa5.98□□□□□ -1.45
VPS9D1-205ENST00000565452 CENPWQ5EE01 88 aa5.98□□□□□ -1.45
VPS9D1-205ENST00000565452 PIK3CD-AS1Q5SR53 167 aa5.98□□□□□ -1.45
VPS9D1-205ENST00000565452 UQCC3Q6UW78 93 aa5.98□□□□□ -1.45
VPS9D1-205ENST00000565452 Q6ZRU5 148 aa5.98□□□□□ -1.45
VPS9D1-205ENST00000565452 C11orf72Q8NBR9 251 aa5.98□□□□□ -1.45
VPS9D1-205ENST00000565452 OCC1Q8TAD7 63 aa5.98□□□□□ -1.45
VPS9D1-205ENST00000565452 PTH2Q96A98 100 aa5.98□□□□□ -1.45
VPS9D1-205ENST00000565452 SMIM7Q9BQ49 75 aa5.98□□□□□ -1.45
VPS9D1-205ENST00000565452 TRGV1A0A0A0MS02 117 aa5.97□□□□□ -1.45
VPS9D1-205ENST00000565452 B4DEV8 164 aa5.97□□□□□ -1.45
VPS9D1-205ENST00000565452 KRBOX1C9JBD0 128 aa5.97□□□□□ -1.45
VPS9D1-205ENST00000565452 GNRH2O43555 120 aa5.97□□□□□ -1.45
VPS9D1-205ENST00000565452 CIDEAO60543 219 aa5.97□□□□□ -1.45
VPS9D1-205ENST00000565452 SH2D1AO60880 128 aa5.97□□□□□ -1.45
VPS9D1-205ENST00000565452 MGST1P10620 155 aaKnown RBP5.97□□□□□ -1.45
VPS9D1-205ENST00000565452 SRIP30626 198 aa5.97□□□□□ -1.45
VPS9D1-205ENST00000565452 CRYBA4P53673 196 aa5.97□□□□□ -1.45
VPS9D1-205ENST00000565452 RPS20P60866 119 aaKnown RBP5.97□□□□□ -1.45
VPS9D1-205ENST00000565452 TMEM241Q24JQ0 296 aa5.97□□□□□ -1.45
VPS9D1-205ENST00000565452 MUC21Q5SSG8 566 aa5.97□□□□□ -1.45
VPS9D1-205ENST00000565452 PCNPQ8WW12 178 aaKnown RBP5.97□□□□□ -1.45
VPS9D1-205ENST00000565452 RASL10AQ92737 203 aa5.97□□□□□ -1.45
VPS9D1-205ENST00000565452 Q9HAA7 133 aa5.97□□□□□ -1.45
VPS9D1-205ENST00000565452 GSN-AS1Q9NRJ2 163 aa5.97□□□□□ -1.45
VPS9D1-205ENST00000565452 IL36BQ9NZH7 164 aa5.97□□□□□ -1.45
VPS9D1-205ENST00000565452 TRBV20OR9-2A0A075B6H5 130 aa5.96□□□□□ -1.46
VPS9D1-205ENST00000565452 IGKV3D-20A0A0C4DH25 116 aa5.96□□□□□ -1.46
VPS9D1-205ENST00000565452 IGHV3-16A0A0C4DH30 117 aa5.96□□□□□ -1.46
VPS9D1-205ENST00000565452 IGHV3-38A0A0C4DH36 116 aa5.96□□□□□ -1.46
VPS9D1-205ENST00000565452 C19orf71A6NCJ1 209 aa5.96□□□□□ -1.46
VPS9D1-205ENST00000565452 M0R2P5 195 aa5.96□□□□□ -1.46
VPS9D1-205ENST00000565452 SPINK4O60575 86 aa5.96□□□□□ -1.46
VPS9D1-205ENST00000565452 TYMSP04818 313 aa5.96□□□□□ -1.46
VPS9D1-205ENST00000565452 S100A4P26447 101 aaKnown RBP5.96□□□□□ -1.46
VPS9D1-205ENST00000565452 Q6ZQT7 251 aa5.96□□□□□ -1.46
VPS9D1-205ENST00000565452 FAM231DQ6ZW35 169 aa5.96□□□□□ -1.46
VPS9D1-205ENST00000565452 DPH3P1Q9H4G8 78 aa5.96□□□□□ -1.46
VPS9D1-205ENST00000565452 C11orf21Q9P2W6 132 aa5.96□□□□□ -1.46
VPS9D1-205ENST00000565452 NAGKQ9UJ70 344 aa5.96□□□□□ -1.46
VPS9D1-205ENST00000565452 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.95□□□□□ -1.46
VPS9D1-205ENST00000565452 LINC00862A6NCI5 91 aa5.95□□□□□ -1.46
VPS9D1-205ENST00000565452 P01737 135 aa5.95□□□□□ -1.46
VPS9D1-205ENST00000565452 GYPEP15421 78 aa5.95□□□□□ -1.46
VPS9D1-205ENST00000565452 HNRNPA3P51991 378 aaKnown RBP5.95□□□□□ -1.46
VPS9D1-205ENST00000565452 CEBPGP53567 150 aa5.95□□□□□ -1.46
VPS9D1-205ENST00000565452 LINC01620Q4KN68 170 aa5.95□□□□□ -1.46
VPS9D1-205ENST00000565452 NHLRC2Q8NBF2 726 aa5.95□□□□□ -1.46
VPS9D1-205ENST00000565452 C9orf85Q96MD7 179 aa5.95□□□□□ -1.46
VPS9D1-205ENST00000565452 NAT8Q9UHE5 227 aa5.95□□□□□ -1.46
VPS9D1-205ENST00000565452 A8MWL6 223 aa5.94□□□□□ -1.46
VPS9D1-205ENST00000565452 F2Z2F3 143 aa5.94□□□□□ -1.46
VPS9D1-205ENST00000565452 K7EQD1 137 aa5.94□□□□□ -1.46
VPS9D1-205ENST00000565452 IGHV3-53P01767 116 aa5.94□□□□□ -1.46
VPS9D1-205ENST00000565452 OR5AL1P0C617 328 aa5.94□□□□□ -1.46
VPS9D1-205ENST00000565452 RNASE3P12724 160 aaKnown RBP5.94□□□□□ -1.46
VPS9D1-205ENST00000565452 SRSF3P84103 164 aaKnown RBP5.94□□□□□ -1.46
VPS9D1-205ENST00000565452 FHL2Q14192 279 aa5.94□□□□□ -1.46
VPS9D1-205ENST00000565452 LINC01556Q5JQF7 62 aa5.94□□□□□ -1.46
VPS9D1-205ENST00000565452 PRR27Q6MZM9 219 aa5.94□□□□□ -1.46
VPS9D1-205ENST00000565452 WDR73Q6P4I2 378 aa5.94□□□□□ -1.46
VPS9D1-205ENST00000565452 LINC01551Q86U37 167 aa5.94□□□□□ -1.46
VPS9D1-205ENST00000565452 NUDT10Q8NFP7 164 aa5.94□□□□□ -1.46
VPS9D1-205ENST00000565452 NUDT11Q96G61 164 aa5.94□□□□□ -1.46
VPS9D1-205ENST00000565452 SSBP4Q9BWG4 385 aaPredicted RBP5.94□□□□□ -1.46
VPS9D1-205ENST00000565452 OSTCQ9NRP0 149 aa5.94□□□□□ -1.46
VPS9D1-205ENST00000565452 TRGV4A0A0C4DH28 118 aa5.93□□□□□ -1.46
VPS9D1-205ENST00000565452 FAM231BA6NCW3 169 aa5.93□□□□□ -1.46
VPS9D1-205ENST00000565452 PGPEP1LA6NFU8 196 aa5.93□□□□□ -1.46
VPS9D1-205ENST00000565452 C9JQL5 133 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms