RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 ZNF674Q2M3X9 581 aa4.28□□□□□ -1.72
TCF4-228ENST00000565393 TOR2AQ5JU69 321 aa4.28□□□□□ -1.72
TCF4-228ENST00000565393 TMUB2Q71RG4 321 aa4.28□□□□□ -1.72
TCF4-228ENST00000565393 BAGE2Q86Y30 109 aa4.28□□□□□ -1.72
TCF4-228ENST00000565393 Q8N3U1 123 aa4.28□□□□□ -1.72
TCF4-228ENST00000565393 BAALCQ8WXS3 180 aa4.28□□□□□ -1.72
TCF4-228ENST00000565393 SFRP2Q96HF1 295 aa4.28□□□□□ -1.72
TCF4-228ENST00000565393 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.27□□□□□ -1.73
TCF4-228ENST00000565393 A0A087WX48 190 aa4.27□□□□□ -1.73
TCF4-228ENST00000565393 A0A0D9SG52 128 aa4.27□□□□□ -1.73
TCF4-228ENST00000565393 MUC21A0A0G2JKD1 596 aa4.27□□□□□ -1.73
TCF4-228ENST00000565393 MUC21A0A140T8X8 626 aa4.27□□□□□ -1.73
TCF4-228ENST00000565393 RBFOX3A6NFN3 312 aa4.27□□□□□ -1.73
TCF4-228ENST00000565393 F5H697 171 aa4.27□□□□□ -1.73
TCF4-228ENST00000565393 LTAP01374 205 aa4.27□□□□□ -1.73
TCF4-228ENST00000565393 H2AFB1P0C5Y9 115 aa4.27□□□□□ -1.73
TCF4-228ENST00000565393 SEC11BP0C7V7 166 aa4.27□□□□□ -1.73
TCF4-228ENST00000565393 RPL36AP83881 106 aaKnown RBP4.27□□□□□ -1.73
TCF4-228ENST00000565393 ELOBQ15370 118 aa4.27□□□□□ -1.73
TCF4-228ENST00000565393 DNLZQ5SXM8 178 aa4.27□□□□□ -1.73
TCF4-228ENST00000565393 Q5VSD8 79 aa4.27□□□□□ -1.73
TCF4-228ENST00000565393 UFSP1Q6NVU6 142 aa4.27□□□□□ -1.73
TCF4-228ENST00000565393 COX8CQ7Z4L0 72 aa4.27□□□□□ -1.73
TCF4-228ENST00000565393 ZFP82Q8N141 532 aa4.27□□□□□ -1.73
TCF4-228ENST00000565393 KCNRGQ8N5I3 272 aa4.27□□□□□ -1.73
TCF4-228ENST00000565393 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.27□□□□□ -1.73
TCF4-228ENST00000565393 MBD3L1Q8WWY6 194 aa4.27□□□□□ -1.73
TCF4-228ENST00000565393 RPL36ALQ969Q0 106 aaKnown RBP4.27□□□□□ -1.73
TCF4-228ENST00000565393 UBE2WQ96B02 151 aa4.27□□□□□ -1.73
TCF4-228ENST00000565393 RMI2Q96E14 147 aa4.27□□□□□ -1.73
TCF4-228ENST00000565393 TCEAL7Q9BRU2 100 aa4.27□□□□□ -1.73
TCF4-228ENST00000565393 ZNF471Q9BX82 626 aaPredicted RBP4.27□□□□□ -1.73
TCF4-228ENST00000565393 KLK12Q9UKR0 248 aa4.27□□□□□ -1.73
TCF4-228ENST00000565393 COX11Q9Y6N1 276 aa4.27□□□□□ -1.73
TCF4-228ENST00000565393 FRAS1Q86XX4 4008 aa4.27□□□□□ -1.73
TCF4-228ENST00000565393 KIAA1109Q2LD37 5005 aa4.26□□□□□ -1.73
TCF4-228ENST00000565393 TRBV7-3A0A075B6L6 115 aa4.26□□□□□ -1.73
TCF4-228ENST00000565393 IGKV2D-24A0A075B6R9 120 aa4.26□□□□□ -1.73
TCF4-228ENST00000565393 TRBV6-1A0A0K0K1D8 114 aa4.26□□□□□ -1.73
TCF4-228ENST00000565393 KANTRA0A1W2PQU2 76 aa4.26□□□□□ -1.73
TCF4-228ENST00000565393 UMAD1C9J7I0 102 aa4.26□□□□□ -1.73
TCF4-228ENST00000565393 G3V3Q6 166 aa4.26□□□□□ -1.73
TCF4-228ENST00000565393 RAB4BP61018 213 aa4.26□□□□□ -1.73
TCF4-228ENST00000565393 EIF5AP63241 154 aaKnown RBP4.26□□□□□ -1.73
TCF4-228ENST00000565393 CTAG1AP78358 180 aa4.26□□□□□ -1.73
TCF4-228ENST00000565393 RPL19P84098 196 aaKnown RBP4.26□□□□□ -1.73
TCF4-228ENST00000565393 LAGE3Q14657 143 aa4.26□□□□□ -1.73
TCF4-228ENST00000565393 ZNF56Q15929 161 aa4.26□□□□□ -1.73
TCF4-228ENST00000565393 LINC01559Q495D7 138 aa4.26□□□□□ -1.73
TCF4-228ENST00000565393 SPANXN1Q5VSR9 72 aa4.26□□□□□ -1.73
TCF4-228ENST00000565393 PRR27Q6MZM9 219 aa4.26□□□□□ -1.73
TCF4-228ENST00000565393 NIT1Q86X76 327 aa4.26□□□□□ -1.73
TCF4-228ENST00000565393 Q8N976 141 aa4.26□□□□□ -1.73
TCF4-228ENST00000565393 TMEM70Q9BUB7 260 aa4.26□□□□□ -1.73
TCF4-228ENST00000565393 FAM30AQ9NZY2 134 aa4.26□□□□□ -1.73
TCF4-228ENST00000565393 VPS13DQ5THJ4 4388 aa4.25□□□□□ -1.73
TCF4-228ENST00000565393 TRBV10-1A0A0K0K1A3 114 aa4.25□□□□□ -1.73
TCF4-228ENST00000565393 SCO2A0A1W2PP80 73 aa4.25□□□□□ -1.73
TCF4-228ENST00000565393 HMSDA8MTL9 139 aa4.25□□□□□ -1.73
TCF4-228ENST00000565393 SMIM17P0DL12 118 aa4.25□□□□□ -1.73
TCF4-228ENST00000565393 WFDC2Q14508 124 aa4.25□□□□□ -1.73
TCF4-228ENST00000565393 DAZAP1Q96EP5 407 aaKnown RBP4.25□□□□□ -1.73
TCF4-228ENST00000565393 TPPP3Q9BW30 176 aa4.25□□□□□ -1.73
TCF4-228ENST00000565393 GNG13Q9P2W3 67 aa4.25□□□□□ -1.73
TCF4-228ENST00000565393 TRBV6-8A0A0A6YYG3 113 aa4.24□□□□□ -1.73
TCF4-228ENST00000565393 LOC105371267A0A1B0GV96 52 aa4.24□□□□□ -1.73
TCF4-228ENST00000565393 BCL2L11O43521 198 aa4.24□□□□□ -1.73
TCF4-228ENST00000565393 LINC00694P0DN24 101 aa4.24□□□□□ -1.73
TCF4-228ENST00000565393 UBE2D3P61077 147 aa4.24□□□□□ -1.73
TCF4-228ENST00000565393 UBE2D2P62837 147 aa4.24□□□□□ -1.73
TCF4-228ENST00000565393 CCL20P78556 96 aa4.24□□□□□ -1.73
TCF4-228ENST00000565393 Q0VG73 95 aa4.24□□□□□ -1.73
TCF4-228ENST00000565393 ZNF345Q14585 488 aa4.24□□□□□ -1.73
TCF4-228ENST00000565393 LINC01620Q4KN68 170 aa4.24□□□□□ -1.73
TCF4-228ENST00000565393 Q6ZNX1 250 aa4.24□□□□□ -1.73
TCF4-228ENST00000565393 OR10AG1Q8NH19 301 aa4.24□□□□□ -1.73
TCF4-228ENST00000565393 DNAJC30Q96LL9 226 aa4.24□□□□□ -1.73
TCF4-228ENST00000565393 CHCHD5Q9BSY4 110 aa4.24□□□□□ -1.73
TCF4-228ENST00000565393 MLST8Q9BVC4 326 aa4.24□□□□□ -1.73
TCF4-228ENST00000565393 TEX46H3BTG2 121 aa4.23□□□□□ -1.73
TCF4-228ENST00000565393 J3QL48 77 aa4.23□□□□□ -1.73
TCF4-228ENST00000565393 CRPP02741 224 aa4.23□□□□□ -1.73
TCF4-228ENST00000565393 C1QBP02746 253 aa4.23□□□□□ -1.73
TCF4-228ENST00000565393 ANGP03950 147 aaKnown RBP4.23□□□□□ -1.73
TCF4-228ENST00000565393 PLA2G1BP04054 148 aaKnown RBP4.23□□□□□ -1.73
TCF4-228ENST00000565393 RPL35P42766 123 aaKnown RBP4.23□□□□□ -1.73
TCF4-228ENST00000565393 EIF5AL1Q6IS14 154 aaKnown RBP4.23□□□□□ -1.73
TCF4-228ENST00000565393 C15orf54Q8N8G6 183 aa4.23□□□□□ -1.73
TCF4-228ENST00000565393 SSBP4Q9BWG4 385 aaPredicted RBP4.23□□□□□ -1.73
TCF4-228ENST00000565393 C1orf43Q9BWL3 253 aa4.23□□□□□ -1.73
TCF4-228ENST00000565393 DNAH10Q8IVF4 4471 aa4.22□□□□□ -1.73
TCF4-228ENST00000565393 RAB19A4D1S5 217 aa4.22□□□□□ -1.73
TCF4-228ENST00000565393 MGPP08493 103 aa4.22□□□□□ -1.73
TCF4-228ENST00000565393 OR5AL1P0C617 328 aa4.22□□□□□ -1.73
TCF4-228ENST00000565393 GZMBP10144 247 aa4.22□□□□□ -1.73
TCF4-228ENST00000565393 RAB5CP51148 216 aa4.22□□□□□ -1.73
TCF4-228ENST00000565393 RPS20P60866 119 aaKnown RBP4.22□□□□□ -1.73
TCF4-228ENST00000565393 GAGE6Q13070 117 aa4.22□□□□□ -1.73
TCF4-228ENST00000565393 TMEM97Q5BJF2 176 aa4.22□□□□□ -1.73
TCF4-228ENST00000565393 ENHOQ6UWT2 76 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms