RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 A0A1B0GV72 72 aa11.57□□□□□ -0.56
GTF3C1-205ENST00000564747 ZNF815PA8K554 130 aa11.57□□□□□ -0.56
GTF3C1-205ENST00000564747 NDUFS8O00217 210 aa11.57□□□□□ -0.56
GTF3C1-205ENST00000564747 CD7P09564 240 aa11.57□□□□□ -0.56
GTF3C1-205ENST00000564747 INSL3P51460 131 aa11.57□□□□□ -0.56
GTF3C1-205ENST00000564747 RPL39P62891 51 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-205ENST00000564747 SUMO4Q6EEV6 95 aa11.57□□□□□ -0.56
GTF3C1-205ENST00000564747 PGPEP1Q9NXJ5 209 aa11.57□□□□□ -0.56
GTF3C1-205ENST00000564747 IGHV4OR15-8A0A075B7B6 117 aa11.56□□□□□ -0.56
GTF3C1-205ENST00000564747 A0A087WW49 117 aa11.56□□□□□ -0.56
GTF3C1-205ENST00000564747 MORN3Q6PF18 240 aaPredicted RBP11.56□□□□□ -0.56
GTF3C1-205ENST00000564747 PLEKHB2Q96CS7 222 aa11.56□□□□□ -0.56
GTF3C1-205ENST00000564747 MRPL16Q9NX20 251 aaKnown RBP11.56□□□□□ -0.56
GTF3C1-205ENST00000564747 F5H697 171 aa11.56□□□□□ -0.56
GTF3C1-205ENST00000564747 POLR2KP53803 58 aaKnown RBP11.56□□□□□ -0.56
GTF3C1-205ENST00000564747 ATP5J2P56134 94 aa11.56□□□□□ -0.56
GTF3C1-205ENST00000564747 CFHR3Q02985 330 aa11.56□□□□□ -0.56
GTF3C1-205ENST00000564747 ZFP2Q6ZN57 461 aa11.56□□□□□ -0.56
GTF3C1-205ENST00000564747 PKD1L2Q7Z442 2459 aa11.56□□□□□ -0.56
GTF3C1-205ENST00000564747 C11orf86A6NJI1 115 aa11.56□□□□□ -0.56
GTF3C1-205ENST00000564747 APOMO95445 188 aa11.56□□□□□ -0.56
GTF3C1-205ENST00000564747 CFAP46Q8IYW2 2715 aa11.56□□□□□ -0.56
GTF3C1-205ENST00000564747 IGIPA6NJ69 53 aa11.55□□□□□ -0.56
GTF3C1-205ENST00000564747 IGKV3-20P01619 116 aa11.55□□□□□ -0.56
GTF3C1-205ENST00000564747 MSMBP08118 114 aa11.55□□□□□ -0.56
GTF3C1-205ENST00000564747 COX6B1P14854 86 aa11.55□□□□□ -0.56
GTF3C1-205ENST00000564747 ID1P41134 155 aa11.55□□□□□ -0.56
GTF3C1-205ENST00000564747 C10orf99Q6UWK7 81 aa11.55□□□□□ -0.56
GTF3C1-205ENST00000564747 SCGB1D4Q6XE38 83 aa11.55□□□□□ -0.56
GTF3C1-205ENST00000564747 PRORYQ9H606 182 aa11.55□□□□□ -0.56
GTF3C1-205ENST00000564747 FLNCQ14315 2725 aa11.55□□□□□ -0.56
GTF3C1-205ENST00000564747 ZFYVE26Q68DK2 2539 aa11.55□□□□□ -0.56
GTF3C1-205ENST00000564747 IGLV4-69A0A075B6H9 119 aa11.55□□□□□ -0.56
GTF3C1-205ENST00000564747 TMEM238LA0A1B0GVL6 79 aa11.55□□□□□ -0.56
GTF3C1-205ENST00000564747 A6NJY4 79 aa11.55□□□□□ -0.56
GTF3C1-205ENST00000564747 UTP20O75691 2785 aaKnown RBP11.55□□□□□ -0.56
GTF3C1-205ENST00000564747 SORL1Q92673 2214 aa11.54□□□□□ -0.56
GTF3C1-205ENST00000564747 ZNF688P0C7X2 276 aa11.54□□□□□ -0.56
GTF3C1-205ENST00000564747 TRAV12-2A0A075B6T6 113 aa11.54□□□□□ -0.56
GTF3C1-205ENST00000564747 K7EMT4 169 aa11.54□□□□□ -0.56
GTF3C1-205ENST00000564747 FAM74A4Q5TZK3 123 aa11.54□□□□□ -0.56
GTF3C1-205ENST00000564747 SDHAF1A6NFY7 115 aa11.53□□□□□ -0.56
GTF3C1-205ENST00000564747 DLX4Q92988 240 aaPredicted RBP11.53□□□□□ -0.56
GTF3C1-205ENST00000564747 VCYO14598 125 aa11.53□□□□□ -0.56
GTF3C1-205ENST00000564747 SRSF9Q13242 221 aaKnown RBP eCLIP11.53□□□□□ -0.56
GTF3C1-205ENST00000564747 KIR2DL4Q99706 377 aa11.53□□□□□ -0.56
GTF3C1-205ENST00000564747 MDFICQ9P1T7 246 aa11.53□□□□□ -0.56
GTF3C1-205ENST00000564747 LINC01549A6NIU2 74 aa11.52□□□□□ -0.56
GTF3C1-205ENST00000564747 RPL32P62910 135 aaKnown RBP11.52□□□□□ -0.56
GTF3C1-205ENST00000564747 DOPEY2Q9Y3R5 2298 aa11.52□□□□□ -0.57
GTF3C1-205ENST00000564747 CACNA1AO00555 2505 aa11.52□□□□□ -0.57
GTF3C1-205ENST00000564747 PMVKQ15126 192 aa11.52□□□□□ -0.57
GTF3C1-205ENST00000564747 C1QTNF4Q9BXJ3 329 aa11.52□□□□□ -0.57
GTF3C1-205ENST00000564747 PSMB8P28062 276 aa11.51□□□□□ -0.57
GTF3C1-205ENST00000564747 FOXI1Q12951 378 aa11.51□□□□□ -0.57
GTF3C1-205ENST00000564747 CFAP126Q5VTH2 177 aa11.51□□□□□ -0.57
GTF3C1-205ENST00000564747 LOC107984156A0A0G2JMH3 177 aa11.51□□□□□ -0.57
GTF3C1-205ENST00000564747 ARL17AQ8IVW1 177 aa11.51□□□□□ -0.57
GTF3C1-205ENST00000564747 IGHV4-59P01825 116 aa11.5□□□□□ -0.57
GTF3C1-205ENST00000564747 SFTA2Q6UW10 78 aa11.5□□□□□ -0.57
GTF3C1-205ENST00000564747 ZNF256Q9Y2P7 627 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-205ENST00000564747 ZANQ9Y493 2812 aa11.5□□□□□ -0.57
GTF3C1-205ENST00000564747 IGHV3-16A0A0C4DH30 117 aa11.5□□□□□ -0.57
GTF3C1-205ENST00000564747 TRBV27A0A0K0K1C4 114 aa11.5□□□□□ -0.57
GTF3C1-205ENST00000564747 UBE2D1P51668 147 aa11.5□□□□□ -0.57
GTF3C1-205ENST00000564747 Q8N1Y9 231 aa11.5□□□□□ -0.57
GTF3C1-205ENST00000564747 ATP6V0E2Q8NHE4 81 aa11.5□□□□□ -0.57
GTF3C1-205ENST00000564747 ZNRF2Q8NHG8 242 aa11.5□□□□□ -0.57
GTF3C1-205ENST00000564747 LGALS9O00182 355 aa11.49□□□□□ -0.57
GTF3C1-205ENST00000564747 TSPAN13O95857 204 aa11.49□□□□□ -0.57
GTF3C1-205ENST00000564747 PSMB2P49721 201 aa11.49□□□□□ -0.57
GTF3C1-205ENST00000564747 TMEM170BQ5T4T1 132 aa11.49□□□□□ -0.57
GTF3C1-205ENST00000564747 SYT8Q8NBV8 401 aa11.49□□□□□ -0.57
GTF3C1-205ENST00000564747 A0A0J9YX75 114 aa11.49□□□□□ -0.57
GTF3C1-205ENST00000564747 SMCPP49901 116 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-205ENST00000564747 TSPEAR-AS2P59090 65 aa11.49□□□□□ -0.57
GTF3C1-205ENST00000564747 CKS1BP61024 79 aa11.49□□□□□ -0.57
GTF3C1-205ENST00000564747 TMEM141Q96I45 108 aa11.49□□□□□ -0.57
GTF3C1-205ENST00000564747 C9orf85Q96MD7 179 aa11.49□□□□□ -0.57
GTF3C1-205ENST00000564747 A0A0J9YY99 117 aa11.48□□□□□ -0.57
GTF3C1-205ENST00000564747 TCTEX1D4Q5JR98 221 aa11.48□□□□□ -0.57
GTF3C1-205ENST00000564747 PAPPA-AS1Q5QFB9 102 aa11.48□□□□□ -0.57
GTF3C1-205ENST00000564747 TIMM17AQ99595 171 aa11.48□□□□□ -0.57
GTF3C1-205ENST00000564747 OPRPNQ99935 248 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-205ENST00000564747 USP9XQ93008 2570 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-205ENST00000564747 B4DSR2 109 aa11.48□□□□□ -0.57
GTF3C1-205ENST00000564747 HERVK_113P61574 105 aa11.48□□□□□ -0.57
GTF3C1-205ENST00000564747 ZNF56Q15929 161 aa11.48□□□□□ -0.57
GTF3C1-205ENST00000564747 SPINK13Q1W4C9 94 aa11.48□□□□□ -0.57
GTF3C1-205ENST00000564747 DEFB112Q30KQ8 113 aa11.48□□□□□ -0.57
GTF3C1-205ENST00000564747 NRGNQ92686 78 aa11.48□□□□□ -0.57
GTF3C1-205ENST00000564747 M0QY20 66 aa11.47□□□□□ -0.57
GTF3C1-205ENST00000564747 ZNF418Q8TF45 676 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-205ENST00000564747 CREBBPQ92793 2442 aa11.47□□□□□ -0.57
GTF3C1-205ENST00000564747 USP9YO00507 2555 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-205ENST00000564747 TRBV6-5A0A0K0K1A5 114 aa11.47□□□□□ -0.57
GTF3C1-205ENST00000564747 ZNF876PQ49A33 203 aa11.47□□□□□ -0.57
GTF3C1-205ENST00000564747 LYRM7Q5U5X0 104 aa11.47□□□□□ -0.57
GTF3C1-205ENST00000564747 NFE4Q86UQ8 179 aa11.47□□□□□ -0.57
GTF3C1-205ENST00000564747 SNRPD3P62318 126 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms