RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 A0A1W2PPM0 123 aa16.61■□□□□ 0.25
SPSB3-206ENST00000564709 PRSS29PA6NIE9 313 aa16.61■□□□□ 0.25
SPSB3-206ENST00000564709 PPP1R17O96001 155 aa16.61■□□□□ 0.25
SPSB3-206ENST00000564709 HOXD3P31249 432 aaPredicted RBP16.61■□□□□ 0.25
SPSB3-206ENST00000564709 ZNF702PQ9H963 129 aa16.61■□□□□ 0.25
SPSB3-206ENST00000564709 Q8N1Y9 231 aa16.61■□□□□ 0.25
SPSB3-206ENST00000564709 TP53TG1Q9Y2A0 90 aa16.61■□□□□ 0.25
SPSB3-206ENST00000564709 TMEM89A2RUT3 159 aa16.6■□□□□ 0.25
SPSB3-206ENST00000564709 HOXA3O43365 443 aaPredicted RBP16.6■□□□□ 0.25
SPSB3-206ENST00000564709 KRTAP10-9P60411 292 aa16.6■□□□□ 0.25
SPSB3-206ENST00000564709 OCIAD2Q56VL3 154 aa16.6■□□□□ 0.25
SPSB3-206ENST00000564709 BBC3Q96PG8 261 aaPredicted RBP16.59■□□□□ 0.25
SPSB3-206ENST00000564709 OR11H12B2RN74 326 aa16.59■□□□□ 0.25
SPSB3-206ENST00000564709 RPL39P62891 51 aaKnown RBP16.59■□□□□ 0.25
SPSB3-206ENST00000564709 DEFB136Q30KP8 78 aa16.59■□□□□ 0.25
SPSB3-206ENST00000564709 C18orf65Q6ZTR6 163 aa16.59■□□□□ 0.25
SPSB3-206ENST00000564709 OR11H1Q8NG94 326 aa16.59■□□□□ 0.25
SPSB3-206ENST00000564709 OR11H2Q8NH07 326 aa16.59■□□□□ 0.25
SPSB3-206ENST00000564709 IGHV4-31P0DP07 118 aa16.58■□□□□ 0.25
SPSB3-206ENST00000564709 ZFP2Q6ZN57 461 aa16.58■□□□□ 0.25
SPSB3-206ENST00000564709 C9orf85Q96MD7 179 aa16.58■□□□□ 0.25
SPSB3-206ENST00000564709 CYSLTR1Q9Y271 337 aa16.58■□□□□ 0.25
SPSB3-206ENST00000564709 SPCS1Q9Y6A9 102 aa16.58■□□□□ 0.25
SPSB3-206ENST00000564709 CDKN1BP46527 198 aa16.58■□□□□ 0.24
SPSB3-206ENST00000564709 EMP1P54849 157 aa16.58■□□□□ 0.24
SPSB3-206ENST00000564709 Q6YL49 198 aa16.58■□□□□ 0.24
SPSB3-206ENST00000564709 TSHBP01222 138 aa16.57■□□□□ 0.24
SPSB3-206ENST00000564709 POLR2KP53803 58 aaKnown RBP16.57■□□□□ 0.24
SPSB3-206ENST00000564709 SAMD5Q5TGI4 173 aa16.57■□□□□ 0.24
SPSB3-206ENST00000564709 ODF3Q96PU9 254 aa16.57■□□□□ 0.24
SPSB3-206ENST00000564709 TM2D2Q9BX73 214 aa16.57■□□□□ 0.24
SPSB3-206ENST00000564709 SDHAF1A6NFY7 115 aa16.57■□□□□ 0.24
SPSB3-206ENST00000564709 ZNF56Q15929 161 aa16.57■□□□□ 0.24
SPSB3-206ENST00000564709 TEX15Q9BXT5 2789 aa16.57■□□□□ 0.24
SPSB3-206ENST00000564709 CRYGDP07320 174 aa16.56■□□□□ 0.24
SPSB3-206ENST00000564709 C21orf62-AS1Q17RA5 79 aa16.56■□□□□ 0.24
SPSB3-206ENST00000564709 PHLDA1Q8WV24 401 aaPredicted RBP16.56■□□□□ 0.24
SPSB3-206ENST00000564709 HIST1H4GQ99525 98 aa16.56■□□□□ 0.24
SPSB3-206ENST00000564709 UBR5O95071 2799 aaPredicted RBP16.56■□□□□ 0.24
SPSB3-206ENST00000564709 CREBBPQ92793 2442 aa16.56■□□□□ 0.24
SPSB3-206ENST00000564709 FSHBP01225 129 aa16.56■□□□□ 0.24
SPSB3-206ENST00000564709 ZNF256Q9Y2P7 627 aaPredicted RBP16.56■□□□□ 0.24
SPSB3-206ENST00000564709 IGHV1OR15-1A0A075B7D0 117 aa16.55■□□□□ 0.24
SPSB3-206ENST00000564709 MYMXA0A1B0GTQ4 84 aa16.55■□□□□ 0.24
SPSB3-206ENST00000564709 ELANEP08246 267 aa16.55■□□□□ 0.24
SPSB3-206ENST00000564709 SLURP1P55000 103 aa16.55■□□□□ 0.24
SPSB3-206ENST00000564709 PRADC1Q9BSG0 188 aa16.55■□□□□ 0.24
SPSB3-206ENST00000564709 FABP2P12104 132 aa16.54■□□□□ 0.24
SPSB3-206ENST00000564709 UBE2E2Q96LR5 201 aa16.54■□□□□ 0.24
SPSB3-206ENST00000564709 LGALS9O00182 355 aa16.54■□□□□ 0.24
SPSB3-206ENST00000564709 HIST2H2BDQ6DRA6 164 aa16.54■□□□□ 0.24
SPSB3-206ENST00000564709 KIR2DL4Q99706 377 aa16.54■□□□□ 0.24
SPSB3-206ENST00000564709 NAV2Q8IVL1 2488 aa16.54■□□□□ 0.24
SPSB3-206ENST00000564709 VCYO14598 125 aa16.53■□□□□ 0.24
SPSB3-206ENST00000564709 TCTEX1D4Q5JR98 221 aa16.53■□□□□ 0.24
SPSB3-206ENST00000564709 MORN3Q6PF18 240 aaPredicted RBP16.53■□□□□ 0.24
SPSB3-206ENST00000564709 RPL32P62910 135 aaKnown RBP16.53■□□□□ 0.24
SPSB3-206ENST00000564709 SYT8Q8NBV8 401 aa16.53■□□□□ 0.24
SPSB3-206ENST00000564709 IGIPA6NJ69 53 aa16.52■□□□□ 0.24
SPSB3-206ENST00000564709 KNCNA6PVL3 124 aa16.52■□□□□ 0.24
SPSB3-206ENST00000564709 SAP30O75446 220 aa16.52■□□□□ 0.24
SPSB3-206ENST00000564709 C11orf86A6NJI1 115 aa16.52■□□□□ 0.23
SPSB3-206ENST00000564709 E9PLD3 99 aa16.52■□□□□ 0.23
SPSB3-206ENST00000564709 HTN1P15515 57 aa16.52■□□□□ 0.23
SPSB3-206ENST00000564709 CD300EQ496F6 205 aaPredicted RBP16.52■□□□□ 0.23
SPSB3-206ENST00000564709 DUX3Q96PT4 197 aa16.52■□□□□ 0.23
SPSB3-206ENST00000564709 IGLV4-69A0A075B6H9 119 aa16.51■□□□□ 0.23
SPSB3-206ENST00000564709 RBMY1A1P0DJD3 496 aaKnown RBP16.51■□□□□ 0.23
SPSB3-206ENST00000564709 RBMY1CP0DJD4 496 aa16.51■□□□□ 0.23
SPSB3-206ENST00000564709 PCP4P48539 62 aa16.51■□□□□ 0.23
SPSB3-206ENST00000564709 RBMY1FQ15415 496 aaKnown RBP16.51■□□□□ 0.23
SPSB3-206ENST00000564709 AMTNQ6UX39 209 aa16.51■□□□□ 0.23
SPSB3-206ENST00000564709 TRBV7-3A0A075B6L6 115 aa16.51■□□□□ 0.23
SPSB3-206ENST00000564709 M0QY20 66 aa16.5■□□□□ 0.23
SPSB3-206ENST00000564709 TAL2Q16559 108 aa16.5■□□□□ 0.23
SPSB3-206ENST00000564709 FOXI2Q6ZQN5 318 aa16.5■□□□□ 0.23
SPSB3-206ENST00000564709 ZNF876PQ49A33 203 aa16.5■□□□□ 0.23
SPSB3-206ENST00000564709 Q5PR19 223 aa16.5■□□□□ 0.23
SPSB3-206ENST00000564709 MYO9AB2RTY4 2548 aa16.49■□□□□ 0.23
SPSB3-206ENST00000564709 TRBV27A0A0K0K1C4 114 aa16.49■□□□□ 0.23
SPSB3-206ENST00000564709 ZNF815PA8K554 130 aa16.49■□□□□ 0.23
SPSB3-206ENST00000564709 SCGB2A2Q13296 93 aa16.48■□□□□ 0.23
SPSB3-206ENST00000564709 C12orf74Q32Q52 190 aa16.48■□□□□ 0.23
SPSB3-206ENST00000564709 KLHL30-AS1Q8NEE0 82 aa16.48■□□□□ 0.23
SPSB3-206ENST00000564709 PLEKHB2Q96CS7 222 aa16.48■□□□□ 0.23
SPSB3-206ENST00000564709 VPS25Q9BRG1 176 aa16.48■□□□□ 0.23
SPSB3-206ENST00000564709 PMVKQ15126 192 aa16.48■□□□□ 0.23
SPSB3-206ENST00000564709 OR5A1Q8NGJ0 315 aa16.48■□□□□ 0.23
SPSB3-206ENST00000564709 TRBV6-5A0A0K0K1A5 114 aa16.47■□□□□ 0.23
SPSB3-206ENST00000564709 PRM2P04554 102 aa16.47■□□□□ 0.23
SPSB3-206ENST00000564709 DEFB131AP59861 70 aa16.47■□□□□ 0.23
SPSB3-206ENST00000564709 RIPPLY3P57055 190 aa16.47■□□□□ 0.23
SPSB3-206ENST00000564709 KHDC1LQ5JSQ8 128 aa16.47■□□□□ 0.23
SPSB3-206ENST00000564709 OPRPNQ99935 248 aaPredicted RBP16.47■□□□□ 0.23
SPSB3-206ENST00000564709 TLN2Q9Y4G6 2542 aa16.47■□□□□ 0.23
SPSB3-206ENST00000564709 ZNF469Q96JG9 3925 aaPredicted RBP16.47■□□□□ 0.23
SPSB3-206ENST00000564709 IGLL5B9A064 214 aa16.46■□□□□ 0.23
SPSB3-206ENST00000564709 RNF152Q8N8N0 203 aa16.46■□□□□ 0.23
SPSB3-206ENST00000564709 ZNF843Q8N446 348 aa16.46■□□□□ 0.23
SPSB3-206ENST00000564709 PRRC2AP48634 2157 aaKnown RBP16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms