RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-210	ENST00000564582	DOCK7	Q96N67	2140 aa		4.18	□□□□□ -1.74
CHD9-210	ENST00000564582	KNL1	Q8NG31	2342 aa		4.17	□□□□□ -1.74
CHD9-210	ENST00000564582	MYO7A	Q13402	2215 aa		4.17	□□□□□ -1.74
CHD9-210	ENST00000564582	CABIN1	Q9Y6J0	2220 aa		4.17	□□□□□ -1.74
CHD9-210	ENST00000564582	IGHV1-18	A0A0C4DH31	117 aa		4.17	□□□□□ -1.74
CHD9-210	ENST00000564582	TEX49	A0A1B0GTD5	131 aa		4.17	□□□□□ -1.74
CHD9-210	ENST00000564582	IGIP	A6NJ69	53 aa		4.17	□□□□□ -1.74
CHD9-210	ENST00000564582		H7C423	109 aa		4.17	□□□□□ -1.74
CHD9-210	ENST00000564582		K7EIM0	57 aa		4.17	□□□□□ -1.74
CHD9-210	ENST00000564582	LYZL6	O75951	148 aa		4.17	□□□□□ -1.74
CHD9-210	ENST00000564582	TGFA	P01135	160 aa		4.17	□□□□□ -1.74
CHD9-210	ENST00000564582	ZNF22	P17026	224 aa	Predicted RBP	4.17	□□□□□ -1.74
CHD9-210	ENST00000564582	S100A4	P26447	101 aa	Known RBP	4.17	□□□□□ -1.74
CHD9-210	ENST00000564582	KRTAP10-9	P60411	292 aa		4.17	□□□□□ -1.74
CHD9-210	ENST00000564582	DUX4L9	Q6RFH8	374 aa	Predicted RBP	4.17	□□□□□ -1.74
CHD9-210	ENST00000564582		Q6ZTC4	211 aa		4.17	□□□□□ -1.74
CHD9-210	ENST00000564582	MDS2	Q8NDY4	140 aa		4.17	□□□□□ -1.74
CHD9-210	ENST00000564582	NPB	Q8NG41	125 aa		4.17	□□□□□ -1.74
CHD9-210	ENST00000564582	CHCHD5	Q9BSY4	110 aa		4.17	□□□□□ -1.74
CHD9-210	ENST00000564582	EDA2R	Q9HAV5	297 aa		4.17	□□□□□ -1.74
CHD9-210	ENST00000564582	MRPL36	Q9P0J6	103 aa	Known RBP	4.17	□□□□□ -1.74
CHD9-210	ENST00000564582	PRO0628	Q9UI54	55 aa		4.17	□□□□□ -1.74
CHD9-210	ENST00000564582	PHLDA3	Q9Y5J5	127 aa		4.17	□□□□□ -1.74
CHD9-210	ENST00000564582	SLC25A15	Q9Y619	301 aa		4.17	□□□□□ -1.74
CHD9-210	ENST00000564582	PCNT	O95613	3336 aa		4.17	□□□□□ -1.74
CHD9-210	ENST00000564582	TNC	P24821	2201 aa		4.17	□□□□□ -1.74
CHD9-210	ENST00000564582	TRBV27	A0A0K0K1C4	114 aa		4.16	□□□□□ -1.74
CHD9-210	ENST00000564582	TMEM223	A0PJW6	202 aa		4.16	□□□□□ -1.74
CHD9-210	ENST00000564582	PINLYP	A6NC86	204 aa		4.16	□□□□□ -1.74
CHD9-210	ENST00000564582		E7EUB6	86 aa		4.16	□□□□□ -1.74
CHD9-210	ENST00000564582	IGKV3-20	P01619	116 aa		4.16	□□□□□ -1.74
CHD9-210	ENST00000564582	IGHV1-8	P0DP01	117 aa		4.16	□□□□□ -1.74
CHD9-210	ENST00000564582	PSMB8	P28062	276 aa		4.16	□□□□□ -1.74
CHD9-210	ENST00000564582	ATP5J2	P56134	94 aa		4.16	□□□□□ -1.74
CHD9-210	ENST00000564582	ATP5E	P56381	51 aa	Predicted RBP	4.16	□□□□□ -1.74
CHD9-210	ENST00000564582	FXYD7	P58549	80 aa		4.16	□□□□□ -1.74
CHD9-210	ENST00000564582	HIST1H4A	P62805	103 aa	Known RBP	4.16	□□□□□ -1.74
CHD9-210	ENST00000564582	RPL18A	Q02543	176 aa	Known RBP	4.16	□□□□□ -1.74
CHD9-210	ENST00000564582	GFRAL	Q6UXV0	394 aa		4.16	□□□□□ -1.74
CHD9-210	ENST00000564582	LEAP2	Q969E1	77 aa		4.16	□□□□□ -1.74
CHD9-210	ENST00000564582	VSIG2	Q96IQ7	327 aa		4.16	□□□□□ -1.74
CHD9-210	ENST00000564582	CCL13	Q99616	98 aa		4.16	□□□□□ -1.74
CHD9-210	ENST00000564582	AGPAT4-IT1	Q9H0P7	198 aa		4.16	□□□□□ -1.74
CHD9-210	ENST00000564582	PYGO1	Q9Y3Y4	419 aa		4.16	□□□□□ -1.74
CHD9-210	ENST00000564582	DNAH12	Q6ZR08	3092 aa		4.16	□□□□□ -1.74
CHD9-210	ENST00000564582	PI4KA	P42356	2102 aa		4.16	□□□□□ -1.74
CHD9-210	ENST00000564582	RAI1	Q7Z5J4	1906 aa	Predicted RBP	4.15	□□□□□ -1.74
CHD9-210	ENST00000564582	IGLV11-55	A0A075B6I3	123 aa		4.15	□□□□□ -1.75
CHD9-210	ENST00000564582	TRAV13-1	A0A0B4J241	112 aa		4.15	□□□□□ -1.75
CHD9-210	ENST00000564582	IGHV7-4-1	A0A0J9YVY3	117 aa		4.15	□□□□□ -1.75
CHD9-210	ENST00000564582	TRBV10-3	A0A0K0K1G6	114 aa		4.15	□□□□□ -1.75
CHD9-210	ENST00000564582		F5H768	121 aa		4.15	□□□□□ -1.75
CHD9-210	ENST00000564582		H3BTX0	84 aa		4.15	□□□□□ -1.75
CHD9-210	ENST00000564582	NBR2	O15453	112 aa		4.15	□□□□□ -1.75
CHD9-210	ENST00000564582	NDUFC1	O43677	76 aa		4.15	□□□□□ -1.75
CHD9-210	ENST00000564582	NXPH4	O95158	308 aa		4.15	□□□□□ -1.75
CHD9-210	ENST00000564582	EFNA4	P52798	201 aa		4.15	□□□□□ -1.75
CHD9-210	ENST00000564582	POLR2K	P53803	58 aa	Known RBP	4.15	□□□□□ -1.75
CHD9-210	ENST00000564582	MIA	Q16674	131 aa		4.15	□□□□□ -1.75
CHD9-210	ENST00000564582	NSUN5P1	Q3KNT7	163 aa		4.15	□□□□□ -1.75
CHD9-210	ENST00000564582		Q6ZQT7	251 aa		4.15	□□□□□ -1.75
CHD9-210	ENST00000564582	MUSTN1	Q8IVN3	82 aa		4.15	□□□□□ -1.75
CHD9-210	ENST00000564582	DPH3	Q96FX2	82 aa		4.15	□□□□□ -1.75
CHD9-210	ENST00000564582	PRORY	Q9H606	182 aa		4.15	□□□□□ -1.75
CHD9-210	ENST00000564582	LINC00527	Q9UJ94	153 aa		4.15	□□□□□ -1.75
CHD9-210	ENST00000564582		U3KQA8	63 aa		4.15	□□□□□ -1.75
CHD9-210	ENST00000564582	MED12	Q93074	2177 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	IGLV4-69	A0A075B6H9	119 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	TRBV7-1	A0A0A6YYK4	115 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	TRAV26-2	A0A0B4J265	109 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	IGKV3D-20	A0A0C4DH25	116 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	hADV29S1	A0JD25	119 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582		H0YGX0	51 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582		H3BQ85	93 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	BUB1B-PAK6	H3BSN5	160 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	COX7A2L	O14548	114 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	LINC01565	O15544	149 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	ZNHIT1	O43257	154 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	IGKV2D-40	P01614	121 aa	Predicted RBP	4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	IGLV1-47	P01700	117 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	IGHV1-46	P01743	117 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	IGHV4-39	P01824	125 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	MRGPRG-AS1	Q2M3A8	158 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	C10orf55	Q5SWW7	151 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582		Q6JHZ5	121 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582		Q6ZS52	159 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	TRPT1	Q86TN4	253 aa	Known RBP	4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	CNEP1R1	Q8N9A8	125 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	LY6G5B	Q8NDX9	201 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	SPATA3	Q8NHX4	192 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	DCANP1	Q8TF63	244 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	C17orf77	Q96MU5	243 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	TIMM21	Q9BVV7	248 aa		4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	INTS1	Q8N201	2190 aa	Known RBP	4.14	□□□□□ -1.75
CHD9-210	ENST00000564582	IGHV1-58	A0A0C4DH39	117 aa		4.13	□□□□□ -1.75
CHD9-210	ENST00000564582	IGHV3-64D	A0A0J9YX35	117 aa		4.13	□□□□□ -1.75
CHD9-210	ENST00000564582	TMEM178B	H3BS89	294 aa		4.13	□□□□□ -1.75
CHD9-210	ENST00000564582		K7ENP7	123 aa		4.13	□□□□□ -1.75
CHD9-210	ENST00000564582	IGHV3-48	P01763	117 aa		4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 236.7 ms