RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 CST9LP1Q5W188 147 aa10.01□□□□□ -0.81
SPG7-210ENST00000564409 SFRP2Q96HF1 295 aa10.01□□□□□ -0.81
SPG7-210ENST00000564409 TRBV10-1A0A0K0K1A3 114 aa10□□□□□ -0.81
SPG7-210ENST00000564409 M0R036 132 aa10□□□□□ -0.81
SPG7-210ENST00000564409 ZFP82Q8N141 532 aa10□□□□□ -0.81
SPG7-210ENST00000564409 SAMD10Q9BYL1 202 aa10□□□□□ -0.81
SPG7-210ENST00000564409 JPT2Q9H910 190 aa10□□□□□ -0.81
SPG7-210ENST00000564409 URGCP-MRPS24S4R325 110 aa10□□□□□ -0.81
SPG7-210ENST00000564409 INAFM2P0DMQ5 153 aa9.99□□□□□ -0.81
SPG7-210ENST00000564409 AKR1C3P42330 323 aa9.99□□□□□ -0.81
SPG7-210ENST00000564409 Q5VSD8 79 aa9.99□□□□□ -0.81
SPG7-210ENST00000564409 KCNRGQ8N5I3 272 aa9.99□□□□□ -0.81
SPG7-210ENST00000564409 C14orf178Q8N769 122 aaPredicted RBP9.99□□□□□ -0.81
SPG7-210ENST00000564409 MBD3L1Q8WWY6 194 aa9.99□□□□□ -0.81
SPG7-210ENST00000564409 RMI2Q96E14 147 aa9.99□□□□□ -0.81
SPG7-210ENST00000564409 CHCHD7Q9BUK0 85 aa9.99□□□□□ -0.81
SPG7-210ENST00000564409 A0A0D9SG52 128 aa9.98□□□□□ -0.81
SPG7-210ENST00000564409 GRIFINA4D1Z8 144 aa9.98□□□□□ -0.81
SPG7-210ENST00000564409 HMSDA8MTL9 139 aa9.98□□□□□ -0.81
SPG7-210ENST00000564409 FAM229AH3BQW9 127 aa9.98□□□□□ -0.81
SPG7-210ENST00000564409 CXCL1P09341 107 aa9.98□□□□□ -0.81
SPG7-210ENST00000564409 FAM74A4Q5TZK3 123 aa9.98□□□□□ -0.81
SPG7-210ENST00000564409 PAGE4O60829 102 aa9.97□□□□□ -0.81
SPG7-210ENST00000564409 EIF5AP63241 154 aaKnown RBP9.97□□□□□ -0.81
SPG7-210ENST00000564409 RPL36AP83881 106 aaKnown RBP9.97□□□□□ -0.81
SPG7-210ENST00000564409 ELOBQ15370 118 aa9.97□□□□□ -0.81
SPG7-210ENST00000564409 SFT2D1Q8WV19 159 aa9.97□□□□□ -0.81
SPG7-210ENST00000564409 RPL36ALQ969Q0 106 aaKnown RBP9.97□□□□□ -0.81
SPG7-210ENST00000564409 M0R381 172 aa9.96□□□□□ -0.82
SPG7-210ENST00000564409 PFDN1O60925 122 aa9.96□□□□□ -0.82
SPG7-210ENST00000564409 DAZ4Q86SG3 579 aaKnown RBP9.96□□□□□ -0.82
SPG7-210ENST00000564409 NIT1Q86X76 327 aa9.96□□□□□ -0.82
SPG7-210ENST00000564409 DAZ3Q9NR90 486 aaKnown RBP9.96□□□□□ -0.82
SPG7-210ENST00000564409 Q9UF83 564 aa9.96□□□□□ -0.82
SPG7-210ENST00000564409 TRBV7-3A0A075B6L6 115 aa9.95□□□□□ -0.82
SPG7-210ENST00000564409 A0A087WWL8 130 aa9.95□□□□□ -0.82
SPG7-210ENST00000564409 RAB4BP61018 213 aa9.95□□□□□ -0.82
SPG7-210ENST00000564409 KCNIP4Q6PIL6 250 aa9.95□□□□□ -0.82
SPG7-210ENST00000564409 FAM213BQ8TBF2 198 aa9.95□□□□□ -0.82
SPG7-210ENST00000564409 A0A087WX48 190 aa9.94□□□□□ -0.82
SPG7-210ENST00000564409 TMSB15BA0A087X1C1 80 aa9.94□□□□□ -0.82
SPG7-210ENST00000564409 KANTRA0A1W2PQU2 76 aa9.94□□□□□ -0.82
SPG7-210ENST00000564409 BAGE2Q86Y30 109 aa9.94□□□□□ -0.82
SPG7-210ENST00000564409 Q8N3U1 123 aa9.94□□□□□ -0.82
SPG7-210ENST00000564409 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.94□□□□□ -0.82
SPG7-210ENST00000564409 OR10G8Q8NGN5 311 aa9.94□□□□□ -0.82
SPG7-210ENST00000564409 MLST8Q9BVC4 326 aa9.94□□□□□ -0.82
SPG7-210ENST00000564409 ZNF471Q9BX82 626 aaPredicted RBP9.94□□□□□ -0.82
SPG7-210ENST00000564409 BCL2L11O43521 198 aa9.93□□□□□ -0.82
SPG7-210ENST00000564409 H2AFB1P0C5Y9 115 aa9.93□□□□□ -0.82
SPG7-210ENST00000564409 UBE2D3P61077 147 aa9.93□□□□□ -0.82
SPG7-210ENST00000564409 UBE2D2P62837 147 aa9.93□□□□□ -0.82
SPG7-210ENST00000564409 Q8N976 141 aa9.93□□□□□ -0.82
SPG7-210ENST00000564409 SSBP4Q9BWG4 385 aaPredicted RBP9.93□□□□□ -0.82
SPG7-210ENST00000564409 SMLR1H3BR10 107 aa9.92□□□□□ -0.82
SPG7-210ENST00000564409 SMR3BP02814 79 aaPredicted RBP9.92□□□□□ -0.82
SPG7-210ENST00000564409 OR5AL1P0C617 328 aa9.92□□□□□ -0.82
SPG7-210ENST00000564409 PKIAP61925 76 aa9.92□□□□□ -0.82
SPG7-210ENST00000564409 Q0VG73 95 aa9.92□□□□□ -0.82
SPG7-210ENST00000564409 SCO2A0A1W2PP80 73 aa9.91□□□□□ -0.82
SPG7-210ENST00000564409 SNAI2O43623 268 aa9.91□□□□□ -0.82
SPG7-210ENST00000564409 ATRAIDQ6UW56 229 aa9.91□□□□□ -0.82
SPG7-210ENST00000564409 Q6ZSA8 131 aa9.91□□□□□ -0.82
SPG7-210ENST00000564409 TMUB2Q71RG4 321 aa9.91□□□□□ -0.82
SPG7-210ENST00000564409 KLK12Q9UKR0 248 aa9.91□□□□□ -0.82
SPG7-210ENST00000564409 DMBT1Q9UGM3 2413 aaPredicted RBP9.91□□□□□ -0.82
SPG7-210ENST00000564409 IGKV2D-24A0A075B6R9 120 aa9.9□□□□□ -0.82
SPG7-210ENST00000564409 TRAV1-1A0A0B4J248 108 aa9.9□□□□□ -0.82
SPG7-210ENST00000564409 RAB5CP51148 216 aa9.9□□□□□ -0.82
SPG7-210ENST00000564409 WFDC2Q14508 124 aa9.9□□□□□ -0.82
SPG7-210ENST00000564409 TMEM97Q5BJF2 176 aa9.9□□□□□ -0.82
SPG7-210ENST00000564409 PRR27Q6MZM9 219 aa9.9□□□□□ -0.82
SPG7-210ENST00000564409 OR10AG1Q8NH19 301 aa9.9□□□□□ -0.82
SPG7-210ENST00000564409 MANBALQ9NQG1 85 aa9.9□□□□□ -0.82
SPG7-210ENST00000564409 TRBV6-8A0A0A6YYG3 113 aa9.89□□□□□ -0.83
SPG7-210ENST00000564409 TEX46H3BTG2 121 aa9.89□□□□□ -0.83
SPG7-210ENST00000564409 ZNF56Q15929 161 aa9.89□□□□□ -0.83
SPG7-210ENST00000564409 SPANXN1Q5VSR9 72 aa9.89□□□□□ -0.83
SPG7-210ENST00000564409 EIF5AL1Q6IS14 154 aaKnown RBP9.89□□□□□ -0.83
SPG7-210ENST00000564409 BAALCQ8WXS3 180 aa9.89□□□□□ -0.83
SPG7-210ENST00000564409 FAM30AQ9NZY2 134 aa9.89□□□□□ -0.83
SPG7-210ENST00000564409 A0A1B0GV50 99 aa9.88□□□□□ -0.83
SPG7-210ENST00000564409 RBFOX3A6NFN3 312 aa9.88□□□□□ -0.83
SPG7-210ENST00000564409 LECT2O14960 151 aa9.88□□□□□ -0.83
SPG7-210ENST00000564409 RPL35P42766 123 aaKnown RBP9.88□□□□□ -0.83
SPG7-210ENST00000564409 RPL19P84098 196 aaKnown RBP9.88□□□□□ -0.83
SPG7-210ENST00000564409 C14orf177Q52M58 125 aa9.88□□□□□ -0.83
SPG7-210ENST00000564409 NEXN-AS1Q8NBZ9 246 aa9.88□□□□□ -0.83
SPG7-210ENST00000564409 C11orf52Q96A22 123 aa9.88□□□□□ -0.83
SPG7-210ENST00000564409 UBE2WQ96B02 151 aa9.88□□□□□ -0.83
SPG7-210ENST00000564409 FLG2Q5D862 2391 aaPredicted RBP9.87□□□□□ -0.83
SPG7-210ENST00000564409 TMEM262E9PQX1 116 aa9.87□□□□□ -0.83
SPG7-210ENST00000564409 PLA2G1BP04054 148 aaKnown RBP9.87□□□□□ -0.83
SPG7-210ENST00000564409 SMIM17P0DL12 118 aa9.87□□□□□ -0.83
SPG7-210ENST00000564409 SMIM12Q96EX1 92 aa9.87□□□□□ -0.83
SPG7-210ENST00000564409 AP1S3Q96PC3 154 aa9.87□□□□□ -0.83
SPG7-210ENST00000564409 VAX2Q9UIW0 290 aa9.87□□□□□ -0.83
SPG7-210ENST00000564409 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.86□□□□□ -0.83
SPG7-210ENST00000564409 F5H697 171 aa9.86□□□□□ -0.83
SPG7-210ENST00000564409 RPS20P60866 119 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms