RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 GAGE5Q13069 117 aa16.81■□□□□ 0.28
SPG7-208ENST00000563783 GAGE13Q4V321 117 aa16.81■□□□□ 0.28
SPG7-208ENST00000563783 ZFP82Q8N141 532 aa16.81■□□□□ 0.28
SPG7-208ENST00000563783 SAMD10Q9BYL1 202 aa16.81■□□□□ 0.28
SPG7-208ENST00000563783 JPT2Q9H910 190 aa16.81■□□□□ 0.28
SPG7-208ENST00000563783 TRBV10-1A0A0K0K1A3 114 aa16.8■□□□□ 0.28
SPG7-208ENST00000563783 FUSP35637 526 aaKnown RBP eCLIP16.8■□□□□ 0.28
SPG7-208ENST00000563783 SFT2D1Q8WV19 159 aa16.8■□□□□ 0.28
SPG7-208ENST00000563783 TMEM70Q9BUB7 260 aa16.8■□□□□ 0.28
SPG7-208ENST00000563783 PAGE4O60829 102 aa16.79■□□□□ 0.28
SPG7-208ENST00000563783 C14orf178Q8N769 122 aaPredicted RBP16.79■□□□□ 0.28
SPG7-208ENST00000563783 Q8N814 137 aa16.79■□□□□ 0.28
SPG7-208ENST00000563783 Q9HAA7 133 aa16.79■□□□□ 0.28
SPG7-208ENST00000563783 IGLV5-52A0A0A0MRZ9 124 aa16.78■□□□□ 0.28
SPG7-208ENST00000563783 KANTRA0A1W2PQU2 76 aa16.78■□□□□ 0.28
SPG7-208ENST00000563783 SMLR1H3BR10 107 aa16.78■□□□□ 0.28
SPG7-208ENST00000563783 BCL2L11O43521 198 aa16.78■□□□□ 0.28
SPG7-208ENST00000563783 FAM213BQ8TBF2 198 aa16.78■□□□□ 0.28
SPG7-208ENST00000563783 COX11Q9Y6N1 276 aa16.78■□□□□ 0.28
SPG7-208ENST00000563783 GRIFINA4D1Z8 144 aa16.77■□□□□ 0.28
SPG7-208ENST00000563783 PFDN1O60925 122 aa16.77■□□□□ 0.28
SPG7-208ENST00000563783 C1QBP02746 253 aa16.77■□□□□ 0.28
SPG7-208ENST00000563783 CHCHD7Q9BUK0 85 aa16.77■□□□□ 0.28
SPG7-208ENST00000563783 FAM74A4Q5TZK3 123 aa16.76■□□□□ 0.27
SPG7-208ENST00000563783 MLST8Q9BVC4 326 aa16.76■□□□□ 0.27
SPG7-208ENST00000563783 ZNF471Q9BX82 626 aaPredicted RBP16.76■□□□□ 0.27
SPG7-208ENST00000563783 Q9UF83 564 aa16.76■□□□□ 0.27
SPG7-208ENST00000563783 DMBT1Q9UGM3 2413 aaPredicted RBP16.74■□□□□ 0.27
SPG7-208ENST00000563783 M0R381 172 aa16.74■□□□□ 0.27
SPG7-208ENST00000563783 FRZBQ92765 325 aa16.74■□□□□ 0.27
SPG7-208ENST00000563783 H2AFB1P0C5Y9 115 aa16.73■□□□□ 0.27
SPG7-208ENST00000563783 OR10G8Q8NGN5 311 aa16.73■□□□□ 0.27
SPG7-208ENST00000563783 A0A087WWL8 130 aa16.72■□□□□ 0.27
SPG7-208ENST00000563783 TMSB15BA0A087X1C1 80 aa16.72■□□□□ 0.27
SPG7-208ENST00000563783 RPL36AP83881 106 aaKnown RBP16.72■□□□□ 0.27
SPG7-208ENST00000563783 NIT1Q86X76 327 aa16.72■□□□□ 0.27
SPG7-208ENST00000563783 RPL36ALQ969Q0 106 aaKnown RBP16.72■□□□□ 0.27
SPG7-208ENST00000563783 RMI2Q96E14 147 aa16.72■□□□□ 0.27
SPG7-208ENST00000563783 SSBP4Q9BWG4 385 aaPredicted RBP16.72■□□□□ 0.27
SPG7-208ENST00000563783 URGCP-MRPS24S4R325 110 aa16.72■□□□□ 0.27
SPG7-208ENST00000563783 SRRM2Q9UQ35 2752 aaKnown RBP16.72■□□□□ 0.27
SPG7-208ENST00000563783 TRBV7-3A0A075B6L6 115 aa16.71■□□□□ 0.27
SPG7-208ENST00000563783 SCO2A0A1W2PP80 73 aa16.71■□□□□ 0.27
SPG7-208ENST00000563783 SNAI2O43623 268 aa16.71■□□□□ 0.27
SPG7-208ENST00000563783 OR5AL1P0C617 328 aa16.71■□□□□ 0.27
SPG7-208ENST00000563783 DAZ4Q86SG3 579 aaKnown RBP16.71■□□□□ 0.27
SPG7-208ENST00000563783 BAGE2Q86Y30 109 aa16.71■□□□□ 0.27
SPG7-208ENST00000563783 Q8N3U1 123 aa16.71■□□□□ 0.27
SPG7-208ENST00000563783 DAZ3Q9NR90 486 aaKnown RBP16.71■□□□□ 0.27
SPG7-208ENST00000563783 TRAV1-1A0A0B4J248 108 aa16.7■□□□□ 0.26
SPG7-208ENST00000563783 RAB4BP61018 213 aa16.7■□□□□ 0.26
SPG7-208ENST00000563783 UBE2D3P61077 147 aa16.7■□□□□ 0.26
SPG7-208ENST00000563783 UBE2D2P62837 147 aa16.7■□□□□ 0.26
SPG7-208ENST00000563783 Q5VSD8 79 aa16.7■□□□□ 0.26
SPG7-208ENST00000563783 MANBALQ9NQG1 85 aa16.7■□□□□ 0.26
SPG7-208ENST00000563783 RAB5CP51148 216 aa16.69■□□□□ 0.26
SPG7-208ENST00000563783 ELOBQ15370 118 aa16.69■□□□□ 0.26
SPG7-208ENST00000563783 PRR27Q6MZM9 219 aa16.68■□□□□ 0.26
SPG7-208ENST00000563783 TMUB2Q71RG4 321 aa16.68■□□□□ 0.26
SPG7-208ENST00000563783 C11orf52Q96A22 123 aa16.68■□□□□ 0.26
SPG7-208ENST00000563783 EIF5AL1Q6IS14 154 aaKnown RBP16.67■□□□□ 0.26
SPG7-208ENST00000563783 OR10AG1Q8NH19 301 aa16.67■□□□□ 0.26
SPG7-208ENST00000563783 ATRAIDQ6UW56 229 aa16.65■□□□□ 0.26
SPG7-208ENST00000563783 SMIM12Q96EX1 92 aa16.65■□□□□ 0.26
SPG7-208ENST00000563783 A0A087WX48 190 aa16.64■□□□□ 0.25
SPG7-208ENST00000563783 A0A1B0GV50 99 aa16.64■□□□□ 0.25
SPG7-208ENST00000563783 TEX46H3BTG2 121 aa16.64■□□□□ 0.25
SPG7-208ENST00000563783 INAFM2P0DMQ5 153 aa16.64■□□□□ 0.25
SPG7-208ENST00000563783 RPL35P42766 123 aaKnown RBP16.64■□□□□ 0.25
SPG7-208ENST00000563783 PKIAP61925 76 aa16.64■□□□□ 0.25
SPG7-208ENST00000563783 RPL19P84098 196 aaKnown RBP16.64■□□□□ 0.25
SPG7-208ENST00000563783 KCNIP4Q6PIL6 250 aa16.64■□□□□ 0.25
SPG7-208ENST00000563783 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.64■□□□□ 0.25
SPG7-208ENST00000563783 FAM229AH3BQW9 127 aa16.63■□□□□ 0.25
SPG7-208ENST00000563783 Q0VG73 95 aa16.63■□□□□ 0.25
SPG7-208ENST00000563783 WFDC2Q14508 124 aa16.63■□□□□ 0.25
SPG7-208ENST00000563783 Q6ZSA8 131 aa16.63■□□□□ 0.25
SPG7-208ENST00000563783 VPS13BQ7Z7G8 4022 aa16.62■□□□□ 0.25
SPG7-208ENST00000563783 TRBV6-8A0A0A6YYG3 113 aa16.62■□□□□ 0.25
SPG7-208ENST00000563783 ZNF56Q15929 161 aa16.62■□□□□ 0.25
SPG7-208ENST00000563783 TMEM97Q5BJF2 176 aa16.62■□□□□ 0.25
SPG7-208ENST00000563783 SPANXN1Q5VSR9 72 aa16.62■□□□□ 0.25
SPG7-208ENST00000563783 Q8N976 141 aa16.62■□□□□ 0.25
SPG7-208ENST00000563783 NEXN-AS1Q8NBZ9 246 aa16.62■□□□□ 0.25
SPG7-208ENST00000563783 KLK12Q9UKR0 248 aa16.61■□□□□ 0.25
SPG7-208ENST00000563783 FLG2Q5D862 2391 aaPredicted RBP16.61■□□□□ 0.25
SPG7-208ENST00000563783 AP1S3Q96PC3 154 aa16.6■□□□□ 0.25
SPG7-208ENST00000563783 GNG13Q9P2W3 67 aa16.6■□□□□ 0.25
SPG7-208ENST00000563783 VAX2Q9UIW0 290 aa16.6■□□□□ 0.25
SPG7-208ENST00000563783 RBFOX3A6NFN3 312 aa16.58■□□□□ 0.24
SPG7-208ENST00000563783 RPS20P60866 119 aaKnown RBP16.58■□□□□ 0.24
SPG7-208ENST00000563783 KIF25-AS1Q9Y6Z4 181 aa16.58■□□□□ 0.24
SPG7-208ENST00000563783 IGKV2D-24A0A075B6R9 120 aa16.57■□□□□ 0.24
SPG7-208ENST00000563783 PDE6DO43924 150 aa16.57■□□□□ 0.24
SPG7-208ENST00000563783 SULT1A2P50226 295 aa16.57■□□□□ 0.24
SPG7-208ENST00000563783 CCL20P78556 96 aa16.57■□□□□ 0.24
SPG7-208ENST00000563783 DERL1Q9BUN8 251 aa16.57■□□□□ 0.24
SPG7-208ENST00000563783 FAM30AQ9NZY2 134 aa16.57■□□□□ 0.24
SPG7-208ENST00000563783 SMR3BP02814 79 aaPredicted RBP16.56■□□□□ 0.24
SPG7-208ENST00000563783 SMIM17P0DL12 118 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms