RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 TSC22D3Q99576 134 aa0.39□□□□□ -2.35
HMGB1P33-201ENST00000563485 C10orf95Q9H7T3 257 aa0.39□□□□□ -2.35
HMGB1P33-201ENST00000563485 TMEM14BQ9NUH8 114 aa0.39□□□□□ -2.35
HMGB1P33-201ENST00000563485 BET1LQ9NYM9 111 aa0.39□□□□□ -2.35
HMGB1P33-201ENST00000563485 NDUFA12Q9UI09 145 aa0.39□□□□□ -2.35
HMGB1P33-201ENST00000563485 FRAS1Q86XX4 4008 aa0.39□□□□□ -2.35
HMGB1P33-201ENST00000563485 PLXNA1Q9UIW2 1896 aa0.39□□□□□ -2.35
HMGB1P33-201ENST00000563485 RREB1Q92766 1687 aa0.38□□□□□ -2.35
HMGB1P33-201ENST00000563485 A0A0D9SG42 100 aa0.38□□□□□ -2.35
HMGB1P33-201ENST00000563485 FAM92AA1XBS5 289 aa0.38□□□□□ -2.35
HMGB1P33-201ENST00000563485 NDUFB6O95139 128 aa0.38□□□□□ -2.35
HMGB1P33-201ENST00000563485 PIRTP0C851 137 aa0.38□□□□□ -2.35
HMGB1P33-201ENST00000563485 CCL3L1P16619 93 aa0.38□□□□□ -2.35
HMGB1P33-201ENST00000563485 FGF7P21781 194 aa0.38□□□□□ -2.35
HMGB1P33-201ENST00000563485 C9orf116Q5BN46 136 aaPredicted RBP0.38□□□□□ -2.35
HMGB1P33-201ENST00000563485 MIC13Q5XKP0 118 aa0.38□□□□□ -2.35
HMGB1P33-201ENST00000563485 ARL11Q969Q4 196 aa0.38□□□□□ -2.35
HMGB1P33-201ENST00000563485 COA4Q9NYJ1 87 aa0.38□□□□□ -2.35
HMGB1P33-201ENST00000563485 CFTRP13569 1480 aa0.37□□□□□ -2.35
HMGB1P33-201ENST00000563485 ZNF518AQ6AHZ1 1483 aa0.37□□□□□ -2.35
HMGB1P33-201ENST00000563485 PXDNQ92626 1479 aa0.37□□□□□ -2.35
HMGB1P33-201ENST00000563485 IFT140Q96RY7 1462 aa0.37□□□□□ -2.35
HMGB1P33-201ENST00000563485 TRAV17A0A0B4J275 112 aa0.37□□□□□ -2.35
HMGB1P33-201ENST00000563485 RBAKDNA6NC62 111 aa0.37□□□□□ -2.35
HMGB1P33-201ENST00000563485 IFNA17P01571 189 aa0.37□□□□□ -2.35
HMGB1P33-201ENST00000563485 PIPP12273 146 aaPredicted RBP0.37□□□□□ -2.35
HMGB1P33-201ENST00000563485 CBLN1P23435 193 aa0.37□□□□□ -2.35
HMGB1P33-201ENST00000563485 SSBP1Q04837 148 aaKnown RBP0.37□□□□□ -2.35
HMGB1P33-201ENST00000563485 C12orf73Q69YU5 71 aa0.37□□□□□ -2.35
HMGB1P33-201ENST00000563485 ZNF818PQ6ZRF7 136 aa0.37□□□□□ -2.35
HMGB1P33-201ENST00000563485 C4orf33Q8N1A6 199 aa0.37□□□□□ -2.35
HMGB1P33-201ENST00000563485 KCNRGQ8N5I3 272 aa0.37□□□□□ -2.35
HMGB1P33-201ENST00000563485 TSKUQ8WUA8 353 aa0.37□□□□□ -2.35
HMGB1P33-201ENST00000563485 IFI27L1Q96BM0 104 aa0.37□□□□□ -2.35
HMGB1P33-201ENST00000563485 PSMG3Q9BT73 122 aaPredicted RBP0.37□□□□□ -2.35
HMGB1P33-201ENST00000563485 RERGLQ9H628 205 aa0.37□□□□□ -2.35
HMGB1P33-201ENST00000563485 JMJD1CQ15652 2540 aa0.37□□□□□ -2.35
HMGB1P33-201ENST00000563485 MYH9P35579 1960 aaKnown RBP0.37□□□□□ -2.35
HMGB1P33-201ENST00000563485 NAIPQ13075 1403 aa0.37□□□□□ -2.35
HMGB1P33-201ENST00000563485 NCOA3Q9Y6Q9 1424 aa0.37□□□□□ -2.35
HMGB1P33-201ENST00000563485 WDR7Q9Y4E6 1490 aa0.36□□□□□ -2.35
HMGB1P33-201ENST00000563485 MYO7AQ13402 2215 aa0.36□□□□□ -2.35
HMGB1P33-201ENST00000563485 A0A087WTM6 91 aa0.36□□□□□ -2.35
HMGB1P33-201ENST00000563485 TRAV12-3A0A0B4J271 114 aa0.36□□□□□ -2.35
HMGB1P33-201ENST00000563485 TCRBV3S1A0A5B6 114 aa0.36□□□□□ -2.35
HMGB1P33-201ENST00000563485 ZNF137PP52743 207 aa0.36□□□□□ -2.35
HMGB1P33-201ENST00000563485 ELOF1P60002 83 aaKnown RBP0.36□□□□□ -2.35
HMGB1P33-201ENST00000563485 CCL8P80075 99 aa0.36□□□□□ -2.35
HMGB1P33-201ENST00000563485 IQCJQ1A5X6 159 aa0.36□□□□□ -2.35
HMGB1P33-201ENST00000563485 Q6AWC8 147 aa0.36□□□□□ -2.35
HMGB1P33-201ENST00000563485 RPL13AP3Q6NVV1 102 aa0.36□□□□□ -2.35
HMGB1P33-201ENST00000563485 CYP2G1PQ6ZSU1 146 aa0.36□□□□□ -2.35
HMGB1P33-201ENST00000563485 KRTAP19-3Q7Z4W3 81 aa0.36□□□□□ -2.35
HMGB1P33-201ENST00000563485 Q86TA4 180 aa0.36□□□□□ -2.35
HMGB1P33-201ENST00000563485 SPTSSAQ969W0 71 aa0.36□□□□□ -2.35
HMGB1P33-201ENST00000563485 AGPAT4-IT1Q9H0P7 198 aa0.36□□□□□ -2.35
HMGB1P33-201ENST00000563485 TMEM242Q9NWH2 141 aa0.36□□□□□ -2.35
HMGB1P33-201ENST00000563485 MBD5Q9P267 1494 aa0.35□□□□□ -2.35
HMGB1P33-201ENST00000563485 TANC1Q9C0D5 1861 aa0.35□□□□□ -2.35
HMGB1P33-201ENST00000563485 APCP25054 2843 aa0.35□□□□□ -2.35
HMGB1P33-201ENST00000563485 CDK13Q14004 1512 aaKnown RBP0.35□□□□□ -2.35
HMGB1P33-201ENST00000563485 TRBV7-1A0A0A6YYK4 115 aa0.35□□□□□ -2.35
HMGB1P33-201ENST00000563485 SPAARA0A1B0GVQ0 90 aa0.35□□□□□ -2.35
HMGB1P33-201ENST00000563485 IL5P05113 134 aa0.35□□□□□ -2.35
HMGB1P33-201ENST00000563485 SPINT3P49223 89 aa0.35□□□□□ -2.35
HMGB1P33-201ENST00000563485 UBE2D1P51668 147 aa0.35□□□□□ -2.35
HMGB1P33-201ENST00000563485 NPC2P61916 151 aa0.35□□□□□ -2.35
HMGB1P33-201ENST00000563485 Q5VV11 94 aa0.35□□□□□ -2.35
HMGB1P33-201ENST00000563485 DSCR8Q96T75 97 aa0.35□□□□□ -2.35
HMGB1P33-201ENST00000563485 FAM107BQ9H098 131 aa0.35□□□□□ -2.35
HMGB1P33-201ENST00000563485 NAA60Q9H7X0 242 aa0.35□□□□□ -2.35
HMGB1P33-201ENST00000563485 RPRMQ9NS64 109 aa0.35□□□□□ -2.35
HMGB1P33-201ENST00000563485 MUC22E2RYF6 1773 aaPredicted RBP0.34□□□□□ -2.35
HMGB1P33-201ENST00000563485 F5P12259 2224 aa0.34□□□□□ -2.35
HMGB1P33-201ENST00000563485 CADP27708 2225 aa0.34□□□□□ -2.35
HMGB1P33-201ENST00000563485 FOCADQ5VW36 1801 aa0.34□□□□□ -2.35
HMGB1P33-201ENST00000563485 PHIPQ8WWQ0 1821 aa0.34□□□□□ -2.35
HMGB1P33-201ENST00000563485 PIGBOS1A0A0B4J2F0 54 aa0.34□□□□□ -2.36
HMGB1P33-201ENST00000563485 TRBV10-3A0A0K0K1G6 114 aa0.34□□□□□ -2.36
HMGB1P33-201ENST00000563485 CLPSL1A2RUU4 121 aa0.34□□□□□ -2.36
HMGB1P33-201ENST00000563485 M0R129 80 aa0.34□□□□□ -2.36
HMGB1P33-201ENST00000563485 FXYD1O00168 92 aa0.34□□□□□ -2.36
HMGB1P33-201ENST00000563485 BCORL1Q5H9F3 1711 aa0.34□□□□□ -2.36
HMGB1P33-201ENST00000563485 FAM74A4Q5TZK3 123 aa0.34□□□□□ -2.36
HMGB1P33-201ENST00000563485 SPATA8Q6RVD6 105 aa0.34□□□□□ -2.36
HMGB1P33-201ENST00000563485 SMG6Q86US8 1419 aaKnown RBP0.34□□□□□ -2.36
HMGB1P33-201ENST00000563485 NALCNQ8IZF0 1738 aa0.34□□□□□ -2.36
HMGB1P33-201ENST00000563485 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.34□□□□□ -2.36
HMGB1P33-201ENST00000563485 COX7B2Q8TF08 81 aa0.34□□□□□ -2.36
HMGB1P33-201ENST00000563485 SPANXDQ9BXN6 97 aa0.34□□□□□ -2.36
HMGB1P33-201ENST00000563485 PLAC8Q9NZF1 115 aa0.34□□□□□ -2.36
HMGB1P33-201ENST00000563485 SERP1Q9Y6X1 66 aa0.34□□□□□ -2.36
HMGB1P33-201ENST00000563485 LRRC37A3O60309 1634 aa0.34□□□□□ -2.36
HMGB1P33-201ENST00000563485 A2ML1A8K2U0 1454 aa0.34□□□□□ -2.36
HMGB1P33-201ENST00000563485 BDP1A6H8Y1 2624 aa0.34□□□□□ -2.36
HMGB1P33-201ENST00000563485 KCPQ6ZWJ8 1503 aa0.33□□□□□ -2.36
HMGB1P33-201ENST00000563485 IBTKQ9P2D0 1353 aaPredicted RBP0.33□□□□□ -2.36
HMGB1P33-201ENST00000563485 ANK2Q01484 3957 aa0.33□□□□□ -2.36
HMGB1P33-201ENST00000563485 CACNA1HO95180 2353 aa0.33□□□□□ -2.36
HMGB1P33-201ENST00000563485 PHLPP1O60346 1717 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms