RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 GRIFINA4D1Z8 144 aa4.29□□□□□ -1.72
CNOT1-204ENST00000563130 RS1O15537 224 aa4.29□□□□□ -1.72
CNOT1-204ENST00000563130 ARMS2P0C7Q2 107 aa4.29□□□□□ -1.72
CNOT1-204ENST00000563130 S100A4P26447 101 aaKnown RBP4.29□□□□□ -1.72
CNOT1-204ENST00000563130 GNG4P50150 75 aa4.29□□□□□ -1.72
CNOT1-204ENST00000563130 RPL19P84098 196 aaKnown RBP4.29□□□□□ -1.72
CNOT1-204ENST00000563130 CFAP126Q5VTH2 177 aa4.29□□□□□ -1.72
CNOT1-204ENST00000563130 OR4C5Q8NGB2 326 aa4.29□□□□□ -1.72
CNOT1-204ENST00000563130 HHLA3Q9XRX5 114 aa4.29□□□□□ -1.72
CNOT1-204ENST00000563130 A0A096LPF7 62 aa4.29□□□□□ -1.72
CNOT1-204ENST00000563130 NACAE9PAV3 2078 aa4.29□□□□□ -1.72
CNOT1-204ENST00000563130 H3BVH4 76 aa4.29□□□□□ -1.72
CNOT1-204ENST00000563130 CIDEAO60543 219 aa4.29□□□□□ -1.72
CNOT1-204ENST00000563130 NUDT3O95989 172 aa4.29□□□□□ -1.72
CNOT1-204ENST00000563130 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
CNOT1-204ENST00000563130 PRR27Q6MZM9 219 aa4.29□□□□□ -1.72
CNOT1-204ENST00000563130 PCNPQ8WW12 178 aaKnown RBP4.29□□□□□ -1.72
CNOT1-204ENST00000563130 PARLQ9H300 379 aa4.29□□□□□ -1.72
CNOT1-204ENST00000563130 TMSB15BA0A087X1C1 80 aa4.28□□□□□ -1.72
CNOT1-204ENST00000563130 TRGV4A0A0C4DH28 118 aa4.28□□□□□ -1.72
CNOT1-204ENST00000563130 SNAI2O43623 268 aa4.28□□□□□ -1.72
CNOT1-204ENST00000563130 OR5AL1P0C617 328 aa4.28□□□□□ -1.72
CNOT1-204ENST00000563130 GYPEP15421 78 aa4.28□□□□□ -1.72
CNOT1-204ENST00000563130 GATA1P15976 413 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-204ENST00000563130 UFSP1Q6NVU6 142 aa4.28□□□□□ -1.72
CNOT1-204ENST00000563130 EIF5A2Q9GZV4 153 aaKnown RBP4.28□□□□□ -1.72
CNOT1-204ENST00000563130 A8MWV9 139 aa4.28□□□□□ -1.72
CNOT1-204ENST00000563130 K7EN84 100 aa4.28□□□□□ -1.72
CNOT1-204ENST00000563130 NXPH4O95158 308 aa4.28□□□□□ -1.72
CNOT1-204ENST00000563130 SRP19P09132 144 aaKnown RBP4.28□□□□□ -1.72
CNOT1-204ENST00000563130 MGST1P10620 155 aaKnown RBP4.28□□□□□ -1.72
CNOT1-204ENST00000563130 ZFP2Q6ZN57 461 aa4.28□□□□□ -1.72
CNOT1-204ENST00000563130 BIN3Q9NQY0 253 aa4.28□□□□□ -1.72
CNOT1-204ENST00000563130 LINC00588Q9Y4M8 146 aa4.28□□□□□ -1.72
CNOT1-204ENST00000563130 LY96Q9Y6Y9 160 aa4.28□□□□□ -1.72
CNOT1-204ENST00000563130 TRBV6-4A0A1B0GX49 114 aa4.27□□□□□ -1.73
CNOT1-204ENST00000563130 K7EQD1 137 aa4.27□□□□□ -1.73
CNOT1-204ENST00000563130 IGLC6P0CF74 106 aa4.27□□□□□ -1.73
CNOT1-204ENST00000563130 CCL18P55774 89 aa4.27□□□□□ -1.73
CNOT1-204ENST00000563130 ESRGQ1W209 222 aa4.27□□□□□ -1.73
CNOT1-204ENST00000563130 ZNRF2Q8NHG8 242 aa4.27□□□□□ -1.73
CNOT1-204ENST00000563130 SFRP2Q96HF1 295 aa4.27□□□□□ -1.73
CNOT1-204ENST00000563130 SAMD10Q9BYL1 202 aa4.27□□□□□ -1.73
CNOT1-204ENST00000563130 SMDT1Q9H4I9 107 aa4.27□□□□□ -1.73
CNOT1-204ENST00000563130 JPT2Q9H910 190 aa4.27□□□□□ -1.73
CNOT1-204ENST00000563130 PHLDA3Q9Y5J5 127 aa4.27□□□□□ -1.73
CNOT1-204ENST00000563130 C5orf52A6NGY3 159 aa4.26□□□□□ -1.73
CNOT1-204ENST00000563130 C9JQL5 133 aa4.26□□□□□ -1.73
CNOT1-204ENST00000563130 CRYGDP07320 174 aa4.26□□□□□ -1.73
CNOT1-204ENST00000563130 CTAG1AP78358 180 aa4.26□□□□□ -1.73
CNOT1-204ENST00000563130 MRPL23Q16540 153 aaKnown RBP4.26□□□□□ -1.73
CNOT1-204ENST00000563130 Q6ZR54 194 aa4.26□□□□□ -1.73
CNOT1-204ENST00000563130 UBE2DNLQ8IWF7 75 aa4.26□□□□□ -1.73
CNOT1-204ENST00000563130 ZFP82Q8N141 532 aa4.26□□□□□ -1.73
CNOT1-204ENST00000563130 SLC25A29Q8N8R3 303 aa4.26□□□□□ -1.73
CNOT1-204ENST00000563130 OR2D3Q8NGH3 330 aa4.26□□□□□ -1.73
CNOT1-204ENST00000563130 OR10AG1Q8NH19 301 aa4.26□□□□□ -1.73
CNOT1-204ENST00000563130 DAZAP1Q96EP5 407 aaKnown RBP4.26□□□□□ -1.73
CNOT1-204ENST00000563130 UPK3BQ9BT76 320 aa4.26□□□□□ -1.73
CNOT1-204ENST00000563130 ICOSQ9Y6W8 199 aa4.26□□□□□ -1.73
CNOT1-204ENST00000563130 H0Y8G0 127 aa4.26□□□□□ -1.73
CNOT1-204ENST00000563130 M0R381 172 aa4.26□□□□□ -1.73
CNOT1-204ENST00000563130 P01737 135 aa4.26□□□□□ -1.73
CNOT1-204ENST00000563130 RPS20P60866 119 aaKnown RBP4.26□□□□□ -1.73
CNOT1-204ENST00000563130 Q6ZSN1 163 aa4.26□□□□□ -1.73
CNOT1-204ENST00000563130 FAM231DQ6ZW35 169 aa4.26□□□□□ -1.73
CNOT1-204ENST00000563130 NEGR1Q7Z3B1 354 aa4.26□□□□□ -1.73
CNOT1-204ENST00000563130 VCX2Q9H322 139 aa4.26□□□□□ -1.73
CNOT1-204ENST00000563130 DNAH2Q9P225 4427 aa4.26□□□□□ -1.73
CNOT1-204ENST00000563130 IGHV3-73A0A0B4J1V6 119 aa4.25□□□□□ -1.73
CNOT1-204ENST00000563130 LOC100131303A0A0U1RQF7 123 aa4.25□□□□□ -1.73
CNOT1-204ENST00000563130 KRTAP9-7A8MTY7 169 aa4.25□□□□□ -1.73
CNOT1-204ENST00000563130 RHODO00212 210 aa4.25□□□□□ -1.73
CNOT1-204ENST00000563130 GZMBP10144 247 aa4.25□□□□□ -1.73
CNOT1-204ENST00000563130 IFITM2Q01629 132 aa4.25□□□□□ -1.73
CNOT1-204ENST00000563130 RHOHQ15669 191 aa4.25□□□□□ -1.73
CNOT1-204ENST00000563130 LCE1DQ5T752 114 aa4.25□□□□□ -1.73
CNOT1-204ENST00000563130 LYPD5Q6UWN5 251 aa4.25□□□□□ -1.73
CNOT1-204ENST00000563130 LINC01551Q86U37 167 aa4.25□□□□□ -1.73
CNOT1-204ENST00000563130 SMIM7Q9BQ49 75 aa4.25□□□□□ -1.73
CNOT1-204ENST00000563130 RNASE7Q9H1E1 156 aaKnown RBP4.25□□□□□ -1.73
CNOT1-204ENST00000563130 MRPS16Q9Y3D3 137 aaKnown RBP4.25□□□□□ -1.73
CNOT1-204ENST00000563130 EPPK1P58107 5090 aaKnown RBP4.25□□□□□ -1.73
CNOT1-204ENST00000563130 DNAH10Q8IVF4 4471 aa4.25□□□□□ -1.73
CNOT1-204ENST00000563130 ZNF727A8MUV8 499 aa4.25□□□□□ -1.73
CNOT1-204ENST00000563130 LINC00694P0DN24 101 aa4.25□□□□□ -1.73
CNOT1-204ENST00000563130 SRIP30626 198 aa4.25□□□□□ -1.73
CNOT1-204ENST00000563130 CEBPGP53567 150 aa4.25□□□□□ -1.73
CNOT1-204ENST00000563130 FAM74A3Q4VXF1 159 aa4.25□□□□□ -1.73
CNOT1-204ENST00000563130 FER1L6-AS1Q8NA97 138 aa4.25□□□□□ -1.73
CNOT1-204ENST00000563130 CNFNQ9BYD5 112 aa4.25□□□□□ -1.73
CNOT1-204ENST00000563130 RPP21Q9H633 154 aaKnown RBP4.25□□□□□ -1.73
CNOT1-204ENST00000563130 KIF25-AS1Q9Y6Z4 181 aa4.25□□□□□ -1.73
CNOT1-204ENST00000563130 A0A1W2PPQ1 181 aa4.24□□□□□ -1.73
CNOT1-204ENST00000563130 F2Z2F3 143 aa4.24□□□□□ -1.73
CNOT1-204ENST00000563130 CTRLP40313 264 aa4.24□□□□□ -1.73
CNOT1-204ENST00000563130 LINC00315P59091 139 aa4.24□□□□□ -1.73
CNOT1-204ENST00000563130 PEA15Q15121 130 aa4.24□□□□□ -1.73
CNOT1-204ENST00000563130 CLLU1Q5K131 121 aa4.24□□□□□ -1.73
CNOT1-204ENST00000563130 SH2D6Q7Z4S9 175 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms