RNA–Protein interactions for RNA: ENST00000561169.5

KNSTRN-213, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-213ENST00000561169 RHOHQ15669 191 aa11.71□□□□□ -0.53
KNSTRN-213ENST00000561169 FAM74A4Q5TZK3 123 aa11.71□□□□□ -0.53
KNSTRN-213ENST00000561169 NUDT10Q8NFP7 164 aa11.71□□□□□ -0.53
KNSTRN-213ENST00000561169 DAZAP1Q96EP5 407 aaKnown RBP11.71□□□□□ -0.53
KNSTRN-213ENST00000561169 NUDT11Q96G61 164 aa11.71□□□□□ -0.53
KNSTRN-213ENST00000561169 RNASE7Q9H1E1 156 aaKnown RBP11.71□□□□□ -0.53
KNSTRN-213ENST00000561169 P01737 135 aa11.7□□□□□ -0.54
KNSTRN-213ENST00000561169 SRSF3P84103 164 aaKnown RBP11.7□□□□□ -0.54
KNSTRN-213ENST00000561169 LINC00694P0DN24 101 aa11.69□□□□□ -0.54
KNSTRN-213ENST00000561169 SSTP61278 116 aa11.69□□□□□ -0.54
KNSTRN-213ENST00000561169 SMIM7Q9BQ49 75 aa11.69□□□□□ -0.54
KNSTRN-213ENST00000561169 PRADC1Q9BSG0 188 aa11.69□□□□□ -0.54
KNSTRN-213ENST00000561169 PKHD1P08F94 4074 aa11.69□□□□□ -0.54
KNSTRN-213ENST00000561169 RHODO00212 210 aa11.68□□□□□ -0.54
KNSTRN-213ENST00000561169 NDUFS6O75380 124 aaKnown RBP11.68□□□□□ -0.54
KNSTRN-213ENST00000561169 FER1L6-AS1Q8NA97 138 aa11.68□□□□□ -0.54
KNSTRN-213ENST00000561169 TPPP3Q9BW30 176 aa11.68□□□□□ -0.54
KNSTRN-213ENST00000561169 BIN3Q9NQY0 253 aa11.68□□□□□ -0.54
KNSTRN-213ENST00000561169 MSRB1Q9NZV6 116 aa11.68□□□□□ -0.54
KNSTRN-213ENST00000561169 PKD1P98161 4303 aa11.68□□□□□ -0.54
KNSTRN-213ENST00000561169 RPS20P60866 119 aaKnown RBP11.67□□□□□ -0.54
KNSTRN-213ENST00000561169 SPANXN1Q5VSR9 72 aa11.67□□□□□ -0.54
KNSTRN-213ENST00000561169 WFDC10BQ8IUB3 73 aa11.67□□□□□ -0.54
KNSTRN-213ENST00000561169 RPP21Q9H633 154 aaKnown RBP11.67□□□□□ -0.54
KNSTRN-213ENST00000561169 DNAH11Q96DT5 4516 aa11.67□□□□□ -0.54
KNSTRN-213ENST00000561169 GAGE12JA6NER3 117 aa11.67□□□□□ -0.54
KNSTRN-213ENST00000561169 GAGE1Q13065 139 aa11.67□□□□□ -0.54
KNSTRN-213ENST00000561169 GAGE4Q13068 117 aa11.67□□□□□ -0.54
KNSTRN-213ENST00000561169 GAGE5Q13069 117 aa11.67□□□□□ -0.54
KNSTRN-213ENST00000561169 GAGE13Q4V321 117 aa11.67□□□□□ -0.54
KNSTRN-213ENST00000561169 KIF25-AS1Q9Y6Z4 181 aa11.67□□□□□ -0.54
KNSTRN-213ENST00000561169 SIVA1O15304 175 aa11.66□□□□□ -0.54
KNSTRN-213ENST00000561169 LYZL1Q6UWQ5 148 aa11.66□□□□□ -0.54
KNSTRN-213ENST00000561169 LINC01551Q86U37 167 aa11.66□□□□□ -0.54
KNSTRN-213ENST00000561169 ZNF727A8MUV8 499 aa11.65□□□□□ -0.55
KNSTRN-213ENST00000561169 CTRLP40313 264 aa11.65□□□□□ -0.55
KNSTRN-213ENST00000561169 TIRAPP58753 221 aa11.65□□□□□ -0.55
KNSTRN-213ENST00000561169 LINC00315P59091 139 aa11.65□□□□□ -0.55
KNSTRN-213ENST00000561169 C1orf134Q5TEV5 83 aa11.65□□□□□ -0.55
KNSTRN-213ENST00000561169 SH2D6Q7Z4S9 175 aa11.65□□□□□ -0.55
KNSTRN-213ENST00000561169 LY96Q9Y6Y9 160 aa11.65□□□□□ -0.55
KNSTRN-213ENST00000561169 FAM231DQ6ZW35 169 aa11.64□□□□□ -0.55
KNSTRN-213ENST00000561169 GTSF1Q8WW33 167 aa11.64□□□□□ -0.55
KNSTRN-213ENST00000561169 XKRY2A2RUG3 117 aa11.63□□□□□ -0.55
KNSTRN-213ENST00000561169 ATP6V0E2Q8NHE4 81 aa11.63□□□□□ -0.55
KNSTRN-213ENST00000561169 AP1S3Q96PC3 154 aa11.63□□□□□ -0.55
KNSTRN-213ENST00000561169 GATCO43716 136 aaKnown RBP11.62□□□□□ -0.55
KNSTRN-213ENST00000561169 IFITM2Q01629 132 aa11.62□□□□□ -0.55
KNSTRN-213ENST00000561169 ZNF56Q15929 161 aa11.62□□□□□ -0.55
KNSTRN-213ENST00000561169 TTC32Q5I0X7 151 aa11.62□□□□□ -0.55
KNSTRN-213ENST00000561169 C6orf223Q8N319 242 aa11.62□□□□□ -0.55
KNSTRN-213ENST00000561169 DYNC1H1Q14204 4646 aaKnown RBP11.62□□□□□ -0.55
KNSTRN-213ENST00000561169 A0A1B0GVY2 172 aa11.61□□□□□ -0.55
KNSTRN-213ENST00000561169 A0A1W2PPQ1 181 aa11.61□□□□□ -0.55
KNSTRN-213ENST00000561169 PRSS29PA6NIE9 313 aa11.61□□□□□ -0.55
KNSTRN-213ENST00000561169 CACNG7P62955 275 aa11.61□□□□□ -0.55
KNSTRN-213ENST00000561169 LINC00336Q6ZUF6 198 aa11.61□□□□□ -0.55
KNSTRN-213ENST00000561169 CNFNQ9BYD5 112 aa11.61□□□□□ -0.55
KNSTRN-213ENST00000561169 GTSF1LQ9H1H1 148 aa11.61□□□□□ -0.55
KNSTRN-213ENST00000561169 F2Z2F3 143 aa11.6□□□□□ -0.55
KNSTRN-213ENST00000561169 DNAH10OSP0CZ25 163 aa11.6□□□□□ -0.55
KNSTRN-213ENST00000561169 EVI2AP22794 236 aa11.6□□□□□ -0.55
KNSTRN-213ENST00000561169 ERVFC1-1P60608 527 aa11.6□□□□□ -0.55
KNSTRN-213ENST00000561169 RAB4BP61018 213 aa11.6□□□□□ -0.55
KNSTRN-213ENST00000561169 PEA15Q15121 130 aa11.6□□□□□ -0.55
KNSTRN-213ENST00000561169 NEXN-AS1Q8NBZ9 246 aa11.6□□□□□ -0.55
KNSTRN-213ENST00000561169 NTF3P20783 257 aa11.59□□□□□ -0.55
KNSTRN-213ENST00000561169 RPL23P62829 140 aaKnown RBP11.59□□□□□ -0.55
KNSTRN-213ENST00000561169 LELP1Q5T871 98 aa11.59□□□□□ -0.55
KNSTRN-213ENST00000561169 Q8N3U1 123 aa11.59□□□□□ -0.55
KNSTRN-213ENST00000561169 TNFRSF18Q9Y5U5 241 aa11.59□□□□□ -0.55
KNSTRN-213ENST00000561169 TRBV10-1A0A0K0K1A3 114 aa11.58□□□□□ -0.56
KNSTRN-213ENST00000561169 UBE2D3P61077 147 aa11.58□□□□□ -0.56
KNSTRN-213ENST00000561169 UBE2D2P62837 147 aa11.58□□□□□ -0.56
KNSTRN-213ENST00000561169 TNP2Q05952 138 aa11.58□□□□□ -0.56
KNSTRN-213ENST00000561169 TMEM241Q24JQ0 296 aa11.58□□□□□ -0.56
KNSTRN-213ENST00000561169 OR10G8Q8NGN5 311 aa11.58□□□□□ -0.56
KNSTRN-213ENST00000561169 ISOC2Q96AB3 205 aa11.58□□□□□ -0.56
KNSTRN-213ENST00000561169 OSTCQ9NRP0 149 aa11.58□□□□□ -0.56
KNSTRN-213ENST00000561169 F5H697 171 aa11.57□□□□□ -0.56
KNSTRN-213ENST00000561169 MGPP08493 103 aa11.57□□□□□ -0.56
KNSTRN-213ENST00000561169 FAM74A3Q4VXF1 159 aa11.57□□□□□ -0.56
KNSTRN-213ENST00000561169 CT83Q5H943 113 aa11.57□□□□□ -0.56
KNSTRN-213ENST00000561169 OR10J3Q5JRS4 329 aa11.57□□□□□ -0.56
KNSTRN-213ENST00000561169 SOHLH1Q5JUK2 328 aa11.57□□□□□ -0.56
KNSTRN-213ENST00000561169 WDR73Q6P4I2 378 aa11.57□□□□□ -0.56
KNSTRN-213ENST00000561169 Q6ZRN7 208 aaPredicted RBP11.57□□□□□ -0.56
KNSTRN-213ENST00000561169 PGLYRP4Q96LB8 373 aa11.57□□□□□ -0.56
KNSTRN-213ENST00000561169 SMDT1Q9H4I9 107 aa11.57□□□□□ -0.56
KNSTRN-213ENST00000561169 V9GYV3 84 aa11.57□□□□□ -0.56
KNSTRN-213ENST00000561169 TRBV7-3A0A075B6L6 115 aa11.56□□□□□ -0.56
KNSTRN-213ENST00000561169 IGHV3-38A0A0C4DH36 116 aa11.56□□□□□ -0.56
KNSTRN-213ENST00000561169 A8MWL6 223 aa11.56□□□□□ -0.56
KNSTRN-213ENST00000561169 SMIM17P0DL12 118 aa11.56□□□□□ -0.56
KNSTRN-213ENST00000561169 ADIRFQ15847 76 aa11.56□□□□□ -0.56
KNSTRN-213ENST00000561169 SUMO4Q6EEV6 95 aa11.56□□□□□ -0.56
KNSTRN-213ENST00000561169 NAT8Q9UHE5 227 aa11.56□□□□□ -0.56
KNSTRN-213ENST00000561169 M0QY20 66 aa11.55□□□□□ -0.56
KNSTRN-213ENST00000561169 FOXA3P55318 350 aaPredicted RBP11.55□□□□□ -0.56
KNSTRN-213ENST00000561169 RPL36AP83881 106 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms