RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 DMRTA1Q5VZB9 504 aa10.86□□□□□ -0.67
LMX1B-204ENST00000561065 NFE4Q86UQ8 179 aa10.86□□□□□ -0.67
LMX1B-204ENST00000561065 WFDC10BQ8IUB3 73 aa10.86□□□□□ -0.67
LMX1B-204ENST00000561065 PARLQ9H300 379 aa10.86□□□□□ -0.67
LMX1B-204ENST00000561065 TNFRSF18Q9Y5U5 241 aa10.86□□□□□ -0.67
LMX1B-204ENST00000561065 M0R381 172 aa10.85□□□□□ -0.67
LMX1B-204ENST00000561065 C10orf126Q8N4M7 172 aa10.85□□□□□ -0.67
LMX1B-204ENST00000561065 SFRP2Q96HF1 295 aa10.85□□□□□ -0.67
LMX1B-204ENST00000561065 SCRT2Q9NQ03 307 aa10.85□□□□□ -0.67
LMX1B-204ENST00000561065 CENPWQ5EE01 88 aa10.84□□□□□ -0.67
LMX1B-204ENST00000561065 ALKAL2Q6UX46 152 aa10.84□□□□□ -0.67
LMX1B-204ENST00000561065 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.84□□□□□ -0.67
LMX1B-204ENST00000561065 ATP6V0E2Q8NHE4 81 aa10.84□□□□□ -0.67
LMX1B-204ENST00000561065 A0A087WWC5 75 aa10.84□□□□□ -0.67
LMX1B-204ENST00000561065 CDK2AP2O75956 126 aa10.84□□□□□ -0.67
LMX1B-204ENST00000561065 FAM74A4Q5TZK3 123 aa10.84□□□□□ -0.67
LMX1B-204ENST00000561065 SPANXN1Q5VSR9 72 aa10.84□□□□□ -0.67
LMX1B-204ENST00000561065 GTSF1LQ9H1H1 148 aa10.84□□□□□ -0.67
LMX1B-204ENST00000561065 P01737 135 aa10.83□□□□□ -0.68
LMX1B-204ENST00000561065 OR5AL1P0C617 328 aa10.83□□□□□ -0.68
LMX1B-204ENST00000561065 SMIM17P0DL12 118 aa10.83□□□□□ -0.68
LMX1B-204ENST00000561065 FUSP35637 526 aaKnown RBP eCLIP10.83□□□□□ -0.68
LMX1B-204ENST00000561065 OR10J3Q5JRS4 329 aa10.83□□□□□ -0.68
LMX1B-204ENST00000561065 IGHV3-38A0A0C4DH36 116 aa10.82□□□□□ -0.68
LMX1B-204ENST00000561065 RBFOX3A6NFN3 312 aa10.82□□□□□ -0.68
LMX1B-204ENST00000561065 F2Z2F3 143 aa10.82□□□□□ -0.68
LMX1B-204ENST00000561065 TMEM250H0YL14 139 aa10.82□□□□□ -0.68
LMX1B-204ENST00000561065 EREGO14944 169 aa10.82□□□□□ -0.68
LMX1B-204ENST00000561065 DERL1Q9BUN8 251 aa10.82□□□□□ -0.68
LMX1B-204ENST00000561065 SSBP4Q9BWG4 385 aaPredicted RBP10.82□□□□□ -0.68
LMX1B-204ENST00000561065 TRBV10-1A0A0K0K1A3 114 aa10.81□□□□□ -0.68
LMX1B-204ENST00000561065 RAB19A4D1S5 217 aa10.81□□□□□ -0.68
LMX1B-204ENST00000561065 DNAH10OSP0CZ25 163 aa10.81□□□□□ -0.68
LMX1B-204ENST00000561065 LELP1Q5T871 98 aa10.81□□□□□ -0.68
LMX1B-204ENST00000561065 OR2D3Q8NGH3 330 aa10.81□□□□□ -0.68
LMX1B-204ENST00000561065 SNAI2O43623 268 aa10.8□□□□□ -0.68
LMX1B-204ENST00000561065 NDUFS6O75380 124 aaKnown RBP10.8□□□□□ -0.68
LMX1B-204ENST00000561065 RAB4BP61018 213 aa10.8□□□□□ -0.68
LMX1B-204ENST00000561065 CACNG7P62955 275 aa10.8□□□□□ -0.68
LMX1B-204ENST00000561065 RPL36AP83881 106 aaKnown RBP10.8□□□□□ -0.68
LMX1B-204ENST00000561065 RPL36ALQ969Q0 106 aaKnown RBP10.8□□□□□ -0.68
LMX1B-204ENST00000561065 EIF5A2Q9GZV4 153 aaKnown RBP10.8□□□□□ -0.68
LMX1B-204ENST00000561065 A0A087WWL8 130 aa10.79□□□□□ -0.68
LMX1B-204ENST00000561065 GAGE12JA6NER3 117 aa10.79□□□□□ -0.68
LMX1B-204ENST00000561065 CRYGDP07320 174 aa10.79□□□□□ -0.68
LMX1B-204ENST00000561065 RPL19P84098 196 aaKnown RBP10.79□□□□□ -0.68
LMX1B-204ENST00000561065 GAGE1Q13065 139 aa10.79□□□□□ -0.68
LMX1B-204ENST00000561065 GAGE4Q13068 117 aa10.79□□□□□ -0.68
LMX1B-204ENST00000561065 GAGE5Q13069 117 aa10.79□□□□□ -0.68
LMX1B-204ENST00000561065 GAGE13Q4V321 117 aa10.79□□□□□ -0.68
LMX1B-204ENST00000561065 LYPD6BQ8NI32 183 aa10.79□□□□□ -0.68
LMX1B-204ENST00000561065 SAMD10Q9BYL1 202 aa10.79□□□□□ -0.68
LMX1B-204ENST00000561065 JPT2Q9H910 190 aa10.79□□□□□ -0.68
LMX1B-204ENST00000561065 FAT1Q14517 4588 aa10.78□□□□□ -0.68
LMX1B-204ENST00000561065 F5H697 171 aa10.78□□□□□ -0.68
LMX1B-204ENST00000561065 UFSP1Q6NVU6 142 aa10.78□□□□□ -0.68
LMX1B-204ENST00000561065 MAPKAPK5-AS1Q8N8E1 139 aa10.78□□□□□ -0.68
LMX1B-204ENST00000561065 FER1L6-AS1Q8NA97 138 aa10.78□□□□□ -0.68
LMX1B-204ENST00000561065 AP1S3Q96PC3 154 aa10.78□□□□□ -0.68
LMX1B-204ENST00000561065 MSRB1Q9NZV6 116 aa10.78□□□□□ -0.68
LMX1B-204ENST00000561065 A0A1B0GVG6 124 aa10.77□□□□□ -0.69
LMX1B-204ENST00000561065 NKX2-5P52952 324 aaPredicted RBP10.77□□□□□ -0.69
LMX1B-204ENST00000561065 LINC01556Q5JQF7 62 aa10.77□□□□□ -0.69
LMX1B-204ENST00000561065 KCNIP4Q6PIL6 250 aa10.77□□□□□ -0.69
LMX1B-204ENST00000561065 OR10AG1Q8NH19 301 aa10.77□□□□□ -0.69
LMX1B-204ENST00000561065 TPPP3Q9BW30 176 aa10.77□□□□□ -0.69
LMX1B-204ENST00000561065 URGCP-MRPS24S4R325 110 aa10.77□□□□□ -0.69
LMX1B-204ENST00000561065 DNAH8Q96JB1 4490 aa10.77□□□□□ -0.69
LMX1B-204ENST00000561065 TRBV7-3A0A075B6L6 115 aa10.76□□□□□ -0.69
LMX1B-204ENST00000561065 C19orf71A6NCJ1 209 aa10.76□□□□□ -0.69
LMX1B-204ENST00000561065 H7C1H1 209 aa10.76□□□□□ -0.69
LMX1B-204ENST00000561065 IGLV2-8P01709 118 aa10.76□□□□□ -0.69
LMX1B-204ENST00000561065 ERVFC1-1P60608 527 aa10.76□□□□□ -0.69
LMX1B-204ENST00000561065 ZNF56Q15929 161 aa10.76□□□□□ -0.69
LMX1B-204ENST00000561065 TOR2AQ5JU69 321 aa10.76□□□□□ -0.69
LMX1B-204ENST00000561065 WDR73Q6P4I2 378 aa10.76□□□□□ -0.69
LMX1B-204ENST00000561065 Q6ZSN1 163 aa10.76□□□□□ -0.69
LMX1B-204ENST00000561065 A0A087WTM6 91 aa10.75□□□□□ -0.69
LMX1B-204ENST00000561065 TRGC1P0CF51 173 aa10.75□□□□□ -0.69
LMX1B-204ENST00000561065 TMEM97Q5BJF2 176 aa10.75□□□□□ -0.69
LMX1B-204ENST00000561065 C14orf178Q8N769 122 aaPredicted RBP10.75□□□□□ -0.69
LMX1B-204ENST00000561065 LINC00694P0DN24 101 aa10.74□□□□□ -0.69
LMX1B-204ENST00000561065 CEBPGP53567 150 aa10.74□□□□□ -0.69
LMX1B-204ENST00000561065 SSTP61278 116 aa10.74□□□□□ -0.69
LMX1B-204ENST00000561065 SMIM15Q7Z3B0 74 aa10.74□□□□□ -0.69
LMX1B-204ENST00000561065 NUDT10Q8NFP7 164 aa10.74□□□□□ -0.69
LMX1B-204ENST00000561065 OCC1Q8TAD7 63 aa10.74□□□□□ -0.69
LMX1B-204ENST00000561065 NUDT11Q96G61 164 aa10.74□□□□□ -0.69
LMX1B-204ENST00000561065 PSCAO43653 123 aa10.73□□□□□ -0.69
LMX1B-204ENST00000561065 IGLC6P0CF74 106 aa10.73□□□□□ -0.69
LMX1B-204ENST00000561065 PKIAP61925 76 aa10.73□□□□□ -0.69
LMX1B-204ENST00000561065 ELOBQ15370 118 aa10.73□□□□□ -0.69
LMX1B-204ENST00000561065 Q8N1X5 172 aa10.73□□□□□ -0.69
LMX1B-204ENST00000561065 FAM210AQ96ND0 272 aa10.73□□□□□ -0.69
LMX1B-204ENST00000561065 Q9UF83 564 aa10.73□□□□□ -0.69
LMX1B-204ENST00000561065 VPS13BQ7Z7G8 4022 aa10.72□□□□□ -0.69
LMX1B-204ENST00000561065 TRBV20OR9-2A0A075B6H5 130 aa10.72□□□□□ -0.69
LMX1B-204ENST00000561065 A8MWL6 223 aa10.72□□□□□ -0.69
LMX1B-204ENST00000561065 IBA57-AS1B1ANH7 110 aa10.72□□□□□ -0.69
LMX1B-204ENST00000561065 Q8N3U1 123 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms