RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 TRGV2A0A075B6R0 118 aa7.42□□□□□ -1.22
TPM1-227ENST00000560970 TRAV26-1A0A087WT03 109 aa7.42□□□□□ -1.22
TPM1-227ENST00000560970 IGKV3D-20A0A0C4DH25 116 aa7.42□□□□□ -1.22
TPM1-227ENST00000560970 PGPEP1LA6NFU8 196 aa7.42□□□□□ -1.22
TPM1-227ENST00000560970 K7EN84 100 aa7.42□□□□□ -1.22
TPM1-227ENST00000560970 IGHV3-53P01767 116 aa7.42□□□□□ -1.22
TPM1-227ENST00000560970 SAPCD1Q5SSQ6 148 aa7.42□□□□□ -1.22
TPM1-227ENST00000560970 KCNIP4Q6PIL6 250 aa7.42□□□□□ -1.22
TPM1-227ENST00000560970 COX8CQ7Z4L0 72 aa7.42□□□□□ -1.22
TPM1-227ENST00000560970 NHLRC2Q8NBF2 726 aa7.42□□□□□ -1.22
TPM1-227ENST00000560970 OR10G8Q8NGN5 311 aa7.42□□□□□ -1.22
TPM1-227ENST00000560970 BIN3Q9NQY0 253 aa7.42□□□□□ -1.22
TPM1-227ENST00000560970 TRAV9-1A0A075B6T8 112 aa7.41□□□□□ -1.22
TPM1-227ENST00000560970 A0A0J9YY99 117 aa7.41□□□□□ -1.22
TPM1-227ENST00000560970 A0A1W2PPQ1 181 aa7.41□□□□□ -1.22
TPM1-227ENST00000560970 SH2D1AO60880 128 aa7.41□□□□□ -1.22
TPM1-227ENST00000560970 IGLV2-8P01709 118 aa7.41□□□□□ -1.22
TPM1-227ENST00000560970 RNASE3P12724 160 aaKnown RBP7.41□□□□□ -1.22
TPM1-227ENST00000560970 OR5I1Q13606 314 aa7.41□□□□□ -1.22
TPM1-227ENST00000560970 BAGE2Q86Y30 109 aa7.41□□□□□ -1.22
TPM1-227ENST00000560970 KCNS1Q96KK3 526 aa7.41□□□□□ -1.22
TPM1-227ENST00000560970 Q9H8V8 135 aa7.41□□□□□ -1.22
TPM1-227ENST00000560970 OSTCQ9NRP0 149 aa7.41□□□□□ -1.22
TPM1-227ENST00000560970 BTF3P20290 206 aaKnown RBP7.4□□□□□ -1.22
TPM1-227ENST00000560970 FAM231DQ6ZW35 169 aa7.4□□□□□ -1.22
TPM1-227ENST00000560970 RASL10AQ92737 203 aa7.4□□□□□ -1.22
TPM1-227ENST00000560970 ZNF479Q96JC4 524 aa7.4□□□□□ -1.22
TPM1-227ENST00000560970 C9orf85Q96MD7 179 aa7.4□□□□□ -1.22
TPM1-227ENST00000560970 SPXQ9BT56 116 aa7.4□□□□□ -1.22
TPM1-227ENST00000560970 SCRT2Q9NQ03 307 aa7.4□□□□□ -1.22
TPM1-227ENST00000560970 ZFP30Q9Y2G7 519 aa7.4□□□□□ -1.22
TPM1-227ENST00000560970 MRPS16Q9Y3D3 137 aaKnown RBP7.4□□□□□ -1.22
TPM1-227ENST00000560970 URGCP-MRPS24S4R325 110 aa7.4□□□□□ -1.22
TPM1-227ENST00000560970 TGIF2-C20orf24A0A0A6YYL0 155 aa7.39□□□□□ -1.23
TPM1-227ENST00000560970 FABP5P3A8MUU1 101 aa7.39□□□□□ -1.23
TPM1-227ENST00000560970 C1orf196B1AJZ1 125 aa7.39□□□□□ -1.23
TPM1-227ENST00000560970 H3BNG1 76 aa7.39□□□□□ -1.23
TPM1-227ENST00000560970 M0R2P5 195 aa7.39□□□□□ -1.23
TPM1-227ENST00000560970 GHRHP01286 108 aa7.39□□□□□ -1.23
TPM1-227ENST00000560970 CXCL1P09341 107 aa7.39□□□□□ -1.23
TPM1-227ENST00000560970 ERVFC1-1P60608 527 aa7.39□□□□□ -1.23
TPM1-227ENST00000560970 RAB5BP61020 215 aa7.39□□□□□ -1.23
TPM1-227ENST00000560970 VSIG2Q96IQ7 327 aa7.39□□□□□ -1.23
TPM1-227ENST00000560970 MLST8Q9BVC4 326 aa7.39□□□□□ -1.23
TPM1-227ENST00000560970 IL36BQ9NZH7 164 aa7.39□□□□□ -1.23
TPM1-227ENST00000560970 EIF4EBP3O60516 100 aaPredicted RBP7.38□□□□□ -1.23
TPM1-227ENST00000560970 MGST1P10620 155 aaKnown RBP7.38□□□□□ -1.23
TPM1-227ENST00000560970 KRTAP10-2P60368 255 aa7.38□□□□□ -1.23
TPM1-227ENST00000560970 FHL2Q14192 279 aa7.38□□□□□ -1.23
TPM1-227ENST00000560970 FAM162BQ5T6X4 162 aa7.38□□□□□ -1.23
TPM1-227ENST00000560970 V9GYV3 84 aa7.38□□□□□ -1.23
TPM1-227ENST00000560970 TRAV4A0A0B4J268 109 aa7.37□□□□□ -1.23
TPM1-227ENST00000560970 GRIFINA4D1Z8 144 aa7.37□□□□□ -1.23
TPM1-227ENST00000560970 H3BVH4 76 aa7.37□□□□□ -1.23
TPM1-227ENST00000560970 ORM1P02763 201 aa7.37□□□□□ -1.23
TPM1-227ENST00000560970 RPS10P46783 165 aaKnown RBP7.37□□□□□ -1.23
TPM1-227ENST00000560970 LINC00315P59091 139 aa7.37□□□□□ -1.23
TPM1-227ENST00000560970 RPL19P84098 196 aaKnown RBP7.37□□□□□ -1.23
TPM1-227ENST00000560970 TMSB15BA0A087X1C1 80 aa7.36□□□□□ -1.23
TPM1-227ENST00000560970 A0A096LPF7 62 aa7.36□□□□□ -1.23
TPM1-227ENST00000560970 ASIPP42127 132 aa7.36□□□□□ -1.23
TPM1-227ENST00000560970 CRYBA4P53673 196 aa7.36□□□□□ -1.23
TPM1-227ENST00000560970 ESRGQ1W209 222 aa7.36□□□□□ -1.23
TPM1-227ENST00000560970 CT83Q5H943 113 aa7.36□□□□□ -1.23
TPM1-227ENST00000560970 DNLZQ5SXM8 178 aa7.36□□□□□ -1.23
TPM1-227ENST00000560970 RNASE7Q9H1E1 156 aaKnown RBP7.36□□□□□ -1.23
TPM1-227ENST00000560970 HERC1Q15751 4861 aa7.36□□□□□ -1.23
TPM1-227ENST00000560970 DMBT1Q9UGM3 2413 aaPredicted RBP7.35□□□□□ -1.23
TPM1-227ENST00000560970 TRGV4A0A0C4DH28 118 aa7.35□□□□□ -1.23
TPM1-227ENST00000560970 RS1O15537 224 aa7.35□□□□□ -1.23
TPM1-227ENST00000560970 PAX4O43316 350 aa7.35□□□□□ -1.23
TPM1-227ENST00000560970 GATCO43716 136 aaKnown RBP7.35□□□□□ -1.23
TPM1-227ENST00000560970 S100A4P26447 101 aaKnown RBP7.35□□□□□ -1.23
TPM1-227ENST00000560970 ZNF876PQ49A33 203 aa7.35□□□□□ -1.23
TPM1-227ENST00000560970 CFAP126Q5VTH2 177 aa7.35□□□□□ -1.23
TPM1-227ENST00000560970 PRR27Q6MZM9 219 aa7.35□□□□□ -1.23
TPM1-227ENST00000560970 Q6ZRN7 208 aaPredicted RBP7.35□□□□□ -1.23
TPM1-227ENST00000560970 OR4C5Q8NGB2 326 aa7.35□□□□□ -1.23
TPM1-227ENST00000560970 PTH2Q96A98 100 aa7.35□□□□□ -1.23
TPM1-227ENST00000560970 PRO0255Q9UI72 69 aa7.35□□□□□ -1.23
TPM1-227ENST00000560970 LOC100131303A0A0U1RQF7 123 aa7.34□□□□□ -1.23
TPM1-227ENST00000560970 LOC105371267A0A1B0GV96 52 aa7.34□□□□□ -1.23
TPM1-227ENST00000560970 SMIM27A0A1W2PRY6 76 aa7.34□□□□□ -1.23
TPM1-227ENST00000560970 C19orf71A6NCJ1 209 aa7.34□□□□□ -1.23
TPM1-227ENST00000560970 EPM2AB3EWF7 344 aa7.34□□□□□ -1.23
TPM1-227ENST00000560970 P01737 135 aa7.34□□□□□ -1.23
TPM1-227ENST00000560970 ARMS2P0C7Q2 107 aa7.34□□□□□ -1.23
TPM1-227ENST00000560970 COX19Q49B96 90 aa7.34□□□□□ -1.23
TPM1-227ENST00000560970 CDPF1Q6NVV7 123 aa7.34□□□□□ -1.23
TPM1-227ENST00000560970 NUDT10Q8NFP7 164 aa7.34□□□□□ -1.23
TPM1-227ENST00000560970 NUDT11Q96G61 164 aa7.34□□□□□ -1.23
TPM1-227ENST00000560970 RPP21Q9H633 154 aaKnown RBP7.34□□□□□ -1.23
TPM1-227ENST00000560970 JPT2Q9H910 190 aa7.34□□□□□ -1.23
TPM1-227ENST00000560970 HHLA3Q9XRX5 114 aa7.34□□□□□ -1.23
TPM1-227ENST00000560970 IGHV3-73A0A0B4J1V6 119 aa7.33□□□□□ -1.24
TPM1-227ENST00000560970 FAM231BA6NCW3 169 aa7.33□□□□□ -1.24
TPM1-227ENST00000560970 SIVA1O15304 175 aa7.33□□□□□ -1.24
TPM1-227ENST00000560970 GATA1P15976 413 aaPredicted RBP7.33□□□□□ -1.24
TPM1-227ENST00000560970 TSKUQ8WUA8 353 aa7.33□□□□□ -1.24
TPM1-227ENST00000560970 DAZAP1Q96EP5 407 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms