RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 A0A087WX48 190 aa11.54□□□□□ -0.56
TSPAN3-208ENST00000560514 CTXND1A0A1B0GTU2 59 aa11.54□□□□□ -0.56
TSPAN3-208ENST00000560514 RPL7L1Q6DKI1 246 aaKnown RBP11.54□□□□□ -0.56
TSPAN3-208ENST00000560514 ZFP2Q6ZN57 461 aa11.54□□□□□ -0.56
TSPAN3-208ENST00000560514 NIT1Q86X76 327 aa11.54□□□□□ -0.56
TSPAN3-208ENST00000560514 HIST1H2BAQ96A08 127 aa11.54□□□□□ -0.56
TSPAN3-208ENST00000560514 DNAJC30Q96LL9 226 aa11.54□□□□□ -0.56
TSPAN3-208ENST00000560514 DPH3P1Q9H4G8 78 aa11.54□□□□□ -0.56
TSPAN3-208ENST00000560514 PGPEP1LA6NFU8 196 aa11.53□□□□□ -0.56
TSPAN3-208ENST00000560514 RNASE3P12724 160 aaKnown RBP11.53□□□□□ -0.56
TSPAN3-208ENST00000560514 Q0VG73 95 aa11.53□□□□□ -0.56
TSPAN3-208ENST00000560514 OR2T35Q8NGX2 323 aa11.53□□□□□ -0.56
TSPAN3-208ENST00000560514 A0A0D9SG52 128 aa11.52□□□□□ -0.57
TSPAN3-208ENST00000560514 A8MWV9 139 aa11.52□□□□□ -0.57
TSPAN3-208ENST00000560514 IFNA7P01567 189 aa11.52□□□□□ -0.57
TSPAN3-208ENST00000560514 COX8CQ7Z4L0 72 aa11.52□□□□□ -0.57
TSPAN3-208ENST00000560514 C1orf43Q9BWL3 253 aa11.52□□□□□ -0.57
TSPAN3-208ENST00000560514 ZFP30Q9Y2G7 519 aa11.52□□□□□ -0.57
TSPAN3-208ENST00000560514 FXYD6-FXYD2A0A087WZ82 144 aa11.51□□□□□ -0.57
TSPAN3-208ENST00000560514 IGKV3D-20A0A0C4DH25 116 aa11.51□□□□□ -0.57
TSPAN3-208ENST00000560514 LINC00694P0DN24 101 aa11.51□□□□□ -0.57
TSPAN3-208ENST00000560514 ASIPP42127 132 aa11.51□□□□□ -0.57
TSPAN3-208ENST00000560514 ZNF726P1Q15940 193 aa11.51□□□□□ -0.57
TSPAN3-208ENST00000560514 LGALSLQ3ZCW2 172 aaPredicted RBP11.51□□□□□ -0.57
TSPAN3-208ENST00000560514 CHCHD7Q9BUK0 85 aa11.51□□□□□ -0.57
TSPAN3-208ENST00000560514 PARLQ9H300 379 aa11.51□□□□□ -0.57
TSPAN3-208ENST00000560514 S100A4P26447 101 aaKnown RBP11.5□□□□□ -0.57
TSPAN3-208ENST00000560514 DNLZQ5SXM8 178 aa11.5□□□□□ -0.57
TSPAN3-208ENST00000560514 AKR1C8PQ5T2L2 129 aa11.5□□□□□ -0.57
TSPAN3-208ENST00000560514 DMRTA1Q5VZB9 504 aa11.5□□□□□ -0.57
TSPAN3-208ENST00000560514 LINC00479Q96M42 142 aa11.5□□□□□ -0.57
TSPAN3-208ENST00000560514 TCEAL7Q9BRU2 100 aa11.5□□□□□ -0.57
TSPAN3-208ENST00000560514 IL36BQ9NZH7 164 aa11.5□□□□□ -0.57
TSPAN3-208ENST00000560514 ARL2-SNX15V9GYD0 113 aa11.5□□□□□ -0.57
TSPAN3-208ENST00000560514 TRAV34A0A0B4J273 112 aa11.49□□□□□ -0.57
TSPAN3-208ENST00000560514 FAM74A7A6NL05 159 aa11.49□□□□□ -0.57
TSPAN3-208ENST00000560514 PEX7O00628 323 aa11.49□□□□□ -0.57
TSPAN3-208ENST00000560514 CRPP02741 224 aa11.49□□□□□ -0.57
TSPAN3-208ENST00000560514 FHITP49789 147 aa11.49□□□□□ -0.57
TSPAN3-208ENST00000560514 ATRAIDQ6UW56 229 aa11.49□□□□□ -0.57
TSPAN3-208ENST00000560514 ZC2HC1AQ96GY0 325 aa11.49□□□□□ -0.57
TSPAN3-208ENST00000560514 SAMD10Q9BYL1 202 aa11.49□□□□□ -0.57
TSPAN3-208ENST00000560514 TRBV6-1A0A0K0K1D8 114 aa11.48□□□□□ -0.57
TSPAN3-208ENST00000560514 DGAT2L7PQ6IED9 249 aa11.47□□□□□ -0.57
TSPAN3-208ENST00000560514 C14orf178Q8N769 122 aaPredicted RBP11.47□□□□□ -0.57
TSPAN3-208ENST00000560514 STOML3Q8TAV4 291 aa11.47□□□□□ -0.57
TSPAN3-208ENST00000560514 USP17L23D6RBM5 183 aa11.46□□□□□ -0.57
TSPAN3-208ENST00000560514 TMEM262E9PQX1 116 aa11.46□□□□□ -0.57
TSPAN3-208ENST00000560514 HLA-DQA1P01909 254 aa11.46□□□□□ -0.57
TSPAN3-208ENST00000560514 UBE2G2P60604 165 aa11.46□□□□□ -0.57
TSPAN3-208ENST00000560514 FMC1Q96HJ9 113 aa11.46□□□□□ -0.57
TSPAN3-208ENST00000560514 CYTL1Q9NRR1 136 aa11.46□□□□□ -0.57
TSPAN3-208ENST00000560514 Q9UF83 564 aa11.46□□□□□ -0.57
TSPAN3-208ENST00000560514 B4DEV8 164 aa11.45□□□□□ -0.58
TSPAN3-208ENST00000560514 KRBOX1C9JBD0 128 aa11.45□□□□□ -0.58
TSPAN3-208ENST00000560514 G3V3Q6 166 aa11.45□□□□□ -0.58
TSPAN3-208ENST00000560514 CRIP1P50238 77 aa11.45□□□□□ -0.58
TSPAN3-208ENST00000560514 RGS21Q2M5E4 152 aa11.45□□□□□ -0.58
TSPAN3-208ENST00000560514 UFSP1Q6NVU6 142 aa11.45□□□□□ -0.58
TSPAN3-208ENST00000560514 DPH3Q96FX2 82 aa11.45□□□□□ -0.58
TSPAN3-208ENST00000560514 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.45□□□□□ -0.58
TSPAN3-208ENST00000560514 MAP1LC3B2A6NCE7 125 aa11.44□□□□□ -0.58
TSPAN3-208ENST00000560514 RHODO00212 210 aa11.44□□□□□ -0.58
TSPAN3-208ENST00000560514 FAM162BQ5T6X4 162 aa11.44□□□□□ -0.58
TSPAN3-208ENST00000560514 Q86TA4 180 aa11.44□□□□□ -0.58
TSPAN3-208ENST00000560514 C9orf163Q8N9P6 203 aa11.44□□□□□ -0.58
TSPAN3-208ENST00000560514 MAP1LC3BQ9GZQ8 125 aa11.44□□□□□ -0.58
TSPAN3-208ENST00000560514 ARPC5O15511 151 aa11.43□□□□□ -0.58
TSPAN3-208ENST00000560514 S100A9P06702 114 aaKnown RBP11.43□□□□□ -0.58
TSPAN3-208ENST00000560514 ARMS2P0C7Q2 107 aa11.43□□□□□ -0.58
TSPAN3-208ENST00000560514 UBE2G1P62253 170 aa11.43□□□□□ -0.58
TSPAN3-208ENST00000560514 ZNF674Q2M3X9 581 aa11.43□□□□□ -0.58
TSPAN3-208ENST00000560514 C15orf54Q8N8G6 183 aa11.43□□□□□ -0.58
TSPAN3-208ENST00000560514 TNXBP22105 4242 aa11.42□□□□□ -0.58
TSPAN3-208ENST00000560514 LTAP01374 205 aa11.42□□□□□ -0.58
TSPAN3-208ENST00000560514 FAM74A4Q5TZK3 123 aa11.42□□□□□ -0.58
TSPAN3-208ENST00000560514 JPT2Q9H910 190 aa11.42□□□□□ -0.58
TSPAN3-208ENST00000560514 UMAD1C9J7I0 102 aa11.41□□□□□ -0.58
TSPAN3-208ENST00000560514 SH2D1AO60880 128 aa11.41□□□□□ -0.58
TSPAN3-208ENST00000560514 PRSS1P07477 247 aa11.41□□□□□ -0.58
TSPAN3-208ENST00000560514 RPL19P84098 196 aaKnown RBP11.41□□□□□ -0.58
TSPAN3-208ENST00000560514 ZNF345Q14585 488 aa11.41□□□□□ -0.58
TSPAN3-208ENST00000560514 LINC01559Q495D7 138 aa11.41□□□□□ -0.58
TSPAN3-208ENST00000560514 ENHOQ6UWT2 76 aa11.41□□□□□ -0.58
TSPAN3-208ENST00000560514 OR11H4Q8NGC9 324 aa11.41□□□□□ -0.58
TSPAN3-208ENST00000560514 MBD3L1Q8WWY6 194 aa11.41□□□□□ -0.58
TSPAN3-208ENST00000560514 SFRP2Q96HF1 295 aa11.41□□□□□ -0.58
TSPAN3-208ENST00000560514 ANGP03950 147 aaKnown RBP11.4□□□□□ -0.58
TSPAN3-208ENST00000560514 RPL36AP83881 106 aaKnown RBP11.4□□□□□ -0.58
TSPAN3-208ENST00000560514 CST9LP1Q5W188 147 aa11.4□□□□□ -0.58
TSPAN3-208ENST00000560514 KCNRGQ8N5I3 272 aa11.4□□□□□ -0.58
TSPAN3-208ENST00000560514 RPL36ALQ969Q0 106 aaKnown RBP11.4□□□□□ -0.58
TSPAN3-208ENST00000560514 PHLDA3Q9Y5J5 127 aa11.4□□□□□ -0.58
TSPAN3-208ENST00000560514 HMSDA8MTL9 139 aa11.39□□□□□ -0.59
TSPAN3-208ENST00000560514 H3BVH4 76 aa11.39□□□□□ -0.59
TSPAN3-208ENST00000560514 PANO1I0J062 215 aa11.39□□□□□ -0.59
TSPAN3-208ENST00000560514 TPT1P13693 172 aaKnown RBP11.39□□□□□ -0.59
TSPAN3-208ENST00000560514 TRBV10-1A0A0K0K1A3 114 aa11.38□□□□□ -0.59
TSPAN3-208ENST00000560514 M0R036 132 aa11.38□□□□□ -0.59
TSPAN3-208ENST00000560514 MIAQ16674 131 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms