RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 COLCA2A8K830 154 aa7.43□□□□□ -1.22
TPM1-221ENST00000559831 A8MWV9 139 aa7.43□□□□□ -1.22
TPM1-221ENST00000559831 RS1O15537 224 aa7.43□□□□□ -1.22
TPM1-221ENST00000559831 PIK3CD-AS1Q5SR53 167 aa7.43□□□□□ -1.22
TPM1-221ENST00000559831 CFAP126Q5VTH2 177 aa7.43□□□□□ -1.22
TPM1-221ENST00000559831 RASL11AQ6T310 242 aa7.43□□□□□ -1.22
TPM1-221ENST00000559831 OR4C5Q8NGB2 326 aa7.43□□□□□ -1.22
TPM1-221ENST00000559831 SAMD10Q9BYL1 202 aa7.43□□□□□ -1.22
TPM1-221ENST00000559831 DPH3P1Q9H4G8 78 aa7.43□□□□□ -1.22
TPM1-221ENST00000559831 TRAV4A0A0B4J268 109 aa7.42□□□□□ -1.22
TPM1-221ENST00000559831 F5H697 171 aa7.42□□□□□ -1.22
TPM1-221ENST00000559831 RPS10P46783 165 aaKnown RBP7.42□□□□□ -1.22
TPM1-221ENST00000559831 ZNF56Q15929 161 aa7.42□□□□□ -1.22
TPM1-221ENST00000559831 COX19Q49B96 90 aa7.42□□□□□ -1.22
TPM1-221ENST00000559831 TMEM136Q6ZRR5 245 aa7.42□□□□□ -1.22
TPM1-221ENST00000559831 AMN1Q8IY45 258 aa7.42□□□□□ -1.22
TPM1-221ENST00000559831 LINC00612Q8N6U2 182 aa7.42□□□□□ -1.22
TPM1-221ENST00000559831 FRZBQ92765 325 aa7.42□□□□□ -1.22
TPM1-221ENST00000559831 NDUFAF3Q9BU61 184 aa7.42□□□□□ -1.22
TPM1-221ENST00000559831 TMEM191AQ9H0A3 160 aa7.42□□□□□ -1.22
TPM1-221ENST00000559831 TENM3Q9P273 2699 aa7.42□□□□□ -1.22
TPM1-221ENST00000559831 HLA-DQA1P01909 254 aa7.41□□□□□ -1.22
TPM1-221ENST00000559831 CRYGDP07320 174 aa7.41□□□□□ -1.22
TPM1-221ENST00000559831 RAB5AP20339 215 aa7.41□□□□□ -1.22
TPM1-221ENST00000559831 POM121L12Q8N7R1 296 aa7.41□□□□□ -1.22
TPM1-221ENST00000559831 GATD1Q8NB37 220 aa7.41□□□□□ -1.22
TPM1-221ENST00000559831 C11orf45Q8TAV5 145 aa7.41□□□□□ -1.22
TPM1-221ENST00000559831 ZNF479Q96JC4 524 aa7.41□□□□□ -1.22
TPM1-221ENST00000559831 GNB1LQ9BYB4 327 aa7.41□□□□□ -1.22
TPM1-221ENST00000559831 TRAPPC1Q9Y5R8 145 aa7.41□□□□□ -1.22
TPM1-221ENST00000559831 HUWE1Q7Z6Z7 4374 aaKnown RBP7.41□□□□□ -1.22
TPM1-221ENST00000559831 TRGV4A0A0C4DH28 118 aa7.4□□□□□ -1.22
TPM1-221ENST00000559831 RHODO00212 210 aa7.4□□□□□ -1.22
TPM1-221ENST00000559831 APCSP02743 223 aa7.4□□□□□ -1.22
TPM1-221ENST00000559831 MT-ND6P03923 174 aa7.4□□□□□ -1.22
TPM1-221ENST00000559831 HTN3P15516 51 aa7.4□□□□□ -1.22
TPM1-221ENST00000559831 NANOS2P60321 138 aaKnown RBP7.4□□□□□ -1.22
TPM1-221ENST00000559831 FABP9Q0Z7S8 132 aa7.4□□□□□ -1.22
TPM1-221ENST00000559831 C12orf74Q32Q52 190 aa7.4□□□□□ -1.22
TPM1-221ENST00000559831 MRPL51Q4U2R6 128 aaKnown RBP7.4□□□□□ -1.22
TPM1-221ENST00000559831 FAM104BQ5XKR9 115 aa7.4□□□□□ -1.22
TPM1-221ENST00000559831 RNF185Q96GF1 192 aa7.4□□□□□ -1.22
TPM1-221ENST00000559831 MRPL18Q9H0U6 180 aaKnown RBP7.4□□□□□ -1.22
TPM1-221ENST00000559831 KIF25-AS1Q9Y6Z4 181 aa7.4□□□□□ -1.22
TPM1-221ENST00000559831 U3KQK5 164 aa7.4□□□□□ -1.22
TPM1-221ENST00000559831 DNAH9Q9NYC9 4486 aa7.4□□□□□ -1.23
TPM1-221ENST00000559831 TRAV26-2A0A0B4J265 109 aa7.39□□□□□ -1.23
TPM1-221ENST00000559831 SMKR1H3BMG3 65 aa7.39□□□□□ -1.23
TPM1-221ENST00000559831 NCR2O95944 276 aa7.39□□□□□ -1.23
TPM1-221ENST00000559831 ATP5G1P05496 136 aa7.39□□□□□ -1.23
TPM1-221ENST00000559831 RAB4AP20338 218 aa7.39□□□□□ -1.23
TPM1-221ENST00000559831 SLAQ13239 276 aa7.39□□□□□ -1.23
TPM1-221ENST00000559831 KIAA1644Q3SXP7 199 aa7.39□□□□□ -1.23
TPM1-221ENST00000559831 SUMO4Q6EEV6 95 aa7.39□□□□□ -1.23
TPM1-221ENST00000559831 UFSP1Q6NVU6 142 aa7.39□□□□□ -1.23
TPM1-221ENST00000559831 ZFP2Q6ZN57 461 aa7.39□□□□□ -1.23
TPM1-221ENST00000559831 F5H768 121 aa7.38□□□□□ -1.23
TPM1-221ENST00000559831 LINC00315P59091 139 aa7.38□□□□□ -1.23
TPM1-221ENST00000559831 Q6ZTC4 211 aa7.38□□□□□ -1.23
TPM1-221ENST00000559831 C18orf15Q96N68 181 aa7.38□□□□□ -1.23
TPM1-221ENST00000559831 D6R8Y8 96 aa7.37□□□□□ -1.23
TPM1-221ENST00000559831 CIDEAO60543 219 aa7.37□□□□□ -1.23
TPM1-221ENST00000559831 TRGC2P03986 189 aa7.37□□□□□ -1.23
TPM1-221ENST00000559831 GATA1P15976 413 aaPredicted RBP7.37□□□□□ -1.23
TPM1-221ENST00000559831 HOXA5P20719 270 aa7.37□□□□□ -1.23
TPM1-221ENST00000559831 CKS2P33552 79 aa7.37□□□□□ -1.23
TPM1-221ENST00000559831 FHL2Q14192 279 aa7.37□□□□□ -1.23
TPM1-221ENST00000559831 Q6ZSN1 163 aa7.37□□□□□ -1.23
TPM1-221ENST00000559831 MEGF8Q7Z7M0 2845 aa7.37□□□□□ -1.23
TPM1-221ENST00000559831 GAS8-AS1O95177 125 aa7.36□□□□□ -1.23
TPM1-221ENST00000559831 P0DMU3 169 aa7.36□□□□□ -1.23
TPM1-221ENST00000559831 FAM231AP0DMU4 169 aa7.36□□□□□ -1.23
TPM1-221ENST00000559831 FAM231CP0DMU5 169 aa7.36□□□□□ -1.23
TPM1-221ENST00000559831 MRAP2Q96G30 205 aa7.36□□□□□ -1.23
TPM1-221ENST00000559831 PRKDCP78527 4128 aaKnown RBP7.36□□□□□ -1.23
TPM1-221ENST00000559831 A0A0J9YY99 117 aa7.35□□□□□ -1.23
TPM1-221ENST00000559831 H7C1H1 209 aa7.35□□□□□ -1.23
TPM1-221ENST00000559831 K7EQD1 137 aa7.35□□□□□ -1.23
TPM1-221ENST00000559831 SRIP30626 198 aa7.35□□□□□ -1.23
TPM1-221ENST00000559831 OR10J3Q5JRS4 329 aa7.35□□□□□ -1.23
TPM1-221ENST00000559831 ORMDL3Q8N138 153 aa7.35□□□□□ -1.23
TPM1-221ENST00000559831 SLC25A29Q8N8R3 303 aa7.35□□□□□ -1.23
TPM1-221ENST00000559831 RPL39LQ96EH5 51 aaKnown RBP7.35□□□□□ -1.23
TPM1-221ENST00000559831 PRELID3AQ96N28 172 aa7.35□□□□□ -1.23
TPM1-221ENST00000559831 EDA2RQ9HAV5 297 aa7.35□□□□□ -1.23
TPM1-221ENST00000559831 HHLA3Q9XRX5 114 aa7.35□□□□□ -1.23
TPM1-221ENST00000559831 DEFB131BA0A096LNP1 70 aa7.34□□□□□ -1.23
TPM1-221ENST00000559831 TRAV10A0A0B4J240 114 aa7.34□□□□□ -1.23
TPM1-221ENST00000559831 M0QY20 66 aa7.34□□□□□ -1.23
TPM1-221ENST00000559831 PAX4O43316 350 aa7.34□□□□□ -1.23
TPM1-221ENST00000559831 PPBPP02775 128 aa7.34□□□□□ -1.23
TPM1-221ENST00000559831 CRYBA4P53673 196 aa7.34□□□□□ -1.23
TPM1-221ENST00000559831 RHOHQ15669 191 aa7.34□□□□□ -1.23
TPM1-221ENST00000559831 PRADC1Q9BSG0 188 aa7.34□□□□□ -1.23
TPM1-221ENST00000559831 TRAV26-1A0A087WT03 109 aa7.33□□□□□ -1.24
TPM1-221ENST00000559831 LOC100131303A0A0U1RQF7 123 aa7.33□□□□□ -1.24
TPM1-221ENST00000559831 TRBV6-4A0A1B0GX49 114 aa7.33□□□□□ -1.24
TPM1-221ENST00000559831 TNFRSF6BO95407 300 aa7.33□□□□□ -1.24
TPM1-221ENST00000559831 NPYP01303 97 aa7.33□□□□□ -1.24
TPM1-221ENST00000559831 NRACQ8N912 160 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms