RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 RMI2Q96E14 147 aa8.18□□□□□ -1.1
SPG11-219ENST00000559822 LTAP01374 205 aa8.17□□□□□ -1.1
SPG11-219ENST00000559822 C1QBP02746 253 aa8.17□□□□□ -1.1
SPG11-219ENST00000559822 CRIP1P50238 77 aa8.17□□□□□ -1.1
SPG11-219ENST00000559822 ZNF674Q2M3X9 581 aa8.17□□□□□ -1.1
SPG11-219ENST00000559822 KCNIP4Q6PIL6 250 aa8.17□□□□□ -1.1
SPG11-219ENST00000559822 C14orf178Q8N769 122 aaPredicted RBP8.17□□□□□ -1.1
SPG11-219ENST00000559822 SFRP2Q96HF1 295 aa8.17□□□□□ -1.1
SPG11-219ENST00000559822 SAMD10Q9BYL1 202 aa8.17□□□□□ -1.1
SPG11-219ENST00000559822 JPT2Q9H910 190 aa8.17□□□□□ -1.1
SPG11-219ENST00000559822 TRBV10-1A0A0K0K1A3 114 aa8.16□□□□□ -1.1
SPG11-219ENST00000559822 GRIFINA4D1Z8 144 aa8.16□□□□□ -1.1
SPG11-219ENST00000559822 G3V3Q6 166 aa8.16□□□□□ -1.1
SPG11-219ENST00000559822 M0R381 172 aa8.16□□□□□ -1.1
SPG11-219ENST00000559822 SMR3BP02814 79 aaPredicted RBP8.16□□□□□ -1.1
SPG11-219ENST00000559822 S100A9P06702 114 aaKnown RBP8.16□□□□□ -1.1
SPG11-219ENST00000559822 CYTL1Q9NRR1 136 aa8.16□□□□□ -1.1
SPG11-219ENST00000559822 TMSB15BA0A087X1C1 80 aa8.15□□□□□ -1.1
SPG11-219ENST00000559822 UMAD1C9J7I0 102 aa8.15□□□□□ -1.1
SPG11-219ENST00000559822 RPL36AP83881 106 aaKnown RBP8.15□□□□□ -1.1
SPG11-219ENST00000559822 ZNF345Q14585 488 aa8.15□□□□□ -1.1
SPG11-219ENST00000559822 ELOBQ15370 118 aa8.15□□□□□ -1.1
SPG11-219ENST00000559822 DAZ4Q86SG3 579 aaKnown RBP8.15□□□□□ -1.1
SPG11-219ENST00000559822 RPL36ALQ969Q0 106 aaKnown RBP8.15□□□□□ -1.1
SPG11-219ENST00000559822 CHCHD7Q9BUK0 85 aa8.15□□□□□ -1.1
SPG11-219ENST00000559822 DAZ3Q9NR90 486 aaKnown RBP8.15□□□□□ -1.1
SPG11-219ENST00000559822 A0A087WWL8 130 aa8.14□□□□□ -1.11
SPG11-219ENST00000559822 A0A087WX48 190 aa8.14□□□□□ -1.11
SPG11-219ENST00000559822 PFDN1O60925 122 aa8.14□□□□□ -1.11
SPG11-219ENST00000559822 NIT1Q86X76 327 aa8.14□□□□□ -1.11
SPG11-219ENST00000559822 Q8N3U1 123 aa8.14□□□□□ -1.11
SPG11-219ENST00000559822 KCNRGQ8N5I3 272 aa8.14□□□□□ -1.11
SPG11-219ENST00000559822 DMBT1Q9UGM3 2413 aaPredicted RBP8.13□□□□□ -1.11
SPG11-219ENST00000559822 PAGE4O60829 102 aa8.13□□□□□ -1.11
SPG11-219ENST00000559822 CXCL1P09341 107 aa8.13□□□□□ -1.11
SPG11-219ENST00000559822 EIF5AP63241 154 aaKnown RBP8.13□□□□□ -1.11
SPG11-219ENST00000559822 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.13□□□□□ -1.11
SPG11-219ENST00000559822 FAM213BQ8TBF2 198 aa8.13□□□□□ -1.11
SPG11-219ENST00000559822 SFT2D1Q8WV19 159 aa8.13□□□□□ -1.11
SPG11-219ENST00000559822 Q9UF83 564 aa8.13□□□□□ -1.11
SPG11-219ENST00000559822 FAT1Q14517 4588 aa8.12□□□□□ -1.11
SPG11-219ENST00000559822 TRBV7-3A0A075B6L6 115 aa8.12□□□□□ -1.11
SPG11-219ENST00000559822 KANTRA0A1W2PQU2 76 aa8.12□□□□□ -1.11
SPG11-219ENST00000559822 HAMPP81172 84 aa8.12□□□□□ -1.11
SPG11-219ENST00000559822 Q8N976 141 aa8.12□□□□□ -1.11
SPG11-219ENST00000559822 MBD3L1Q8WWY6 194 aa8.12□□□□□ -1.11
SPG11-219ENST00000559822 IGKV2D-24A0A075B6R9 120 aa8.11□□□□□ -1.11
SPG11-219ENST00000559822 A0A0D9SG52 128 aa8.11□□□□□ -1.11
SPG11-219ENST00000559822 HMSDA8MTL9 139 aa8.11□□□□□ -1.11
SPG11-219ENST00000559822 LECT2O14960 151 aa8.11□□□□□ -1.11
SPG11-219ENST00000559822 RAB4BP61018 213 aa8.11□□□□□ -1.11
SPG11-219ENST00000559822 UBE2D3P61077 147 aa8.11□□□□□ -1.11
SPG11-219ENST00000559822 PKIAP61925 76 aa8.11□□□□□ -1.11
SPG11-219ENST00000559822 UBE2D2P62837 147 aa8.11□□□□□ -1.11
SPG11-219ENST00000559822 Q0VG73 95 aa8.11□□□□□ -1.11
SPG11-219ENST00000559822 WFDC2Q14508 124 aa8.11□□□□□ -1.11
SPG11-219ENST00000559822 ZNF56Q15929 161 aa8.11□□□□□ -1.11
SPG11-219ENST00000559822 BAGE2Q86Y30 109 aa8.11□□□□□ -1.11
SPG11-219ENST00000559822 OR10G8Q8NGN5 311 aa8.11□□□□□ -1.11
SPG11-219ENST00000559822 UBE2WQ96B02 151 aa8.11□□□□□ -1.11
SPG11-219ENST00000559822 ZNF471Q9BX82 626 aaPredicted RBP8.11□□□□□ -1.11
SPG11-219ENST00000559822 KLK12Q9UKR0 248 aa8.11□□□□□ -1.11
SPG11-219ENST00000559822 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.1□□□□□ -1.11
SPG11-219ENST00000559822 SCO2A0A1W2PP80 73 aa8.1□□□□□ -1.11
SPG11-219ENST00000559822 SMLR1H3BR10 107 aa8.1□□□□□ -1.11
SPG11-219ENST00000559822 BCL2L11O43521 198 aa8.1□□□□□ -1.11
SPG11-219ENST00000559822 PLA2G1BP04054 148 aaKnown RBP8.1□□□□□ -1.11
SPG11-219ENST00000559822 BAALCQ8WXS3 180 aa8.1□□□□□ -1.11
SPG11-219ENST00000559822 FAM30AQ9NZY2 134 aa8.1□□□□□ -1.11
SPG11-219ENST00000559822 TRBV6-8A0A0A6YYG3 113 aa8.09□□□□□ -1.11
SPG11-219ENST00000559822 A0A1B0GV50 99 aa8.09□□□□□ -1.11
SPG11-219ENST00000559822 RBFOX3A6NFN3 312 aa8.09□□□□□ -1.11
SPG11-219ENST00000559822 TMEM262E9PQX1 116 aa8.09□□□□□ -1.11
SPG11-219ENST00000559822 CRPP02741 224 aa8.09□□□□□ -1.11
SPG11-219ENST00000559822 H2AFB1P0C5Y9 115 aa8.09□□□□□ -1.11
SPG11-219ENST00000559822 OR5AL1P0C617 328 aa8.09□□□□□ -1.11
SPG11-219ENST00000559822 C14orf177Q52M58 125 aa8.09□□□□□ -1.11
SPG11-219ENST00000559822 TMEM97Q5BJF2 176 aa8.09□□□□□ -1.11
SPG11-219ENST00000559822 SPANXN1Q5VSR9 72 aa8.09□□□□□ -1.11
SPG11-219ENST00000559822 Q6ZSA8 131 aa8.09□□□□□ -1.11
SPG11-219ENST00000559822 OR10AG1Q8NH19 301 aa8.09□□□□□ -1.11
SPG11-219ENST00000559822 MLST8Q9BVC4 326 aa8.09□□□□□ -1.11
SPG11-219ENST00000559822 SNAI2O43623 268 aa8.08□□□□□ -1.12
SPG11-219ENST00000559822 SMIM17P0DL12 118 aa8.08□□□□□ -1.12
SPG11-219ENST00000559822 RPL19P84098 196 aaKnown RBP8.08□□□□□ -1.12
SPG11-219ENST00000559822 PRR27Q6MZM9 219 aa8.08□□□□□ -1.12
SPG11-219ENST00000559822 ATRAIDQ6UW56 229 aa8.08□□□□□ -1.12
SPG11-219ENST00000559822 SSBP4Q9BWG4 385 aaPredicted RBP8.08□□□□□ -1.12
SPG11-219ENST00000559822 C1orf43Q9BWL3 253 aa8.08□□□□□ -1.12
SPG11-219ENST00000559822 MANBALQ9NQG1 85 aa8.08□□□□□ -1.12
SPG11-219ENST00000559822 F5H697 171 aa8.07□□□□□ -1.12
SPG11-219ENST00000559822 TEX46H3BTG2 121 aa8.07□□□□□ -1.12
SPG11-219ENST00000559822 TMUB2Q71RG4 321 aa8.07□□□□□ -1.12
SPG11-219ENST00000559822 NEXN-AS1Q8NBZ9 246 aa8.07□□□□□ -1.12
SPG11-219ENST00000559822 AP1S3Q96PC3 154 aa8.07□□□□□ -1.12
SPG11-219ENST00000559822 SRRM2Q9UQ35 2752 aaKnown RBP8.06□□□□□ -1.12
SPG11-219ENST00000559822 RPL35P42766 123 aaKnown RBP8.06□□□□□ -1.12
SPG11-219ENST00000559822 EIF5AL1Q6IS14 154 aaKnown RBP8.06□□□□□ -1.12
SPG11-219ENST00000559822 LINC00528Q8N1L1 170 aa8.06□□□□□ -1.12
SPG11-219ENST00000559822 CHCHD5Q9BSY4 110 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 258.7 ms