RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 ZANQ9Y493 2812 aa7.46□□□□□ -1.21
LRRC28-216ENST00000559819 CRYGDP07320 174 aa7.46□□□□□ -1.22
LRRC28-216ENST00000559819 KRTAP10-9P60411 292 aa7.46□□□□□ -1.22
LRRC28-216ENST00000559819 TM2D2Q9BX73 214 aa7.46□□□□□ -1.22
LRRC28-216ENST00000559819 AGRNO00468 2067 aa7.45□□□□□ -1.22
LRRC28-216ENST00000559819 OR11H12B2RN74 326 aa7.45□□□□□ -1.22
LRRC28-216ENST00000559819 DEFB136Q30KP8 78 aa7.45□□□□□ -1.22
LRRC28-216ENST00000559819 ZFP2Q6ZN57 461 aa7.45□□□□□ -1.22
LRRC28-216ENST00000559819 Q8N1Y9 231 aa7.45□□□□□ -1.22
LRRC28-216ENST00000559819 OR11H1Q8NG94 326 aa7.45□□□□□ -1.22
LRRC28-216ENST00000559819 OR11H2Q8NH07 326 aa7.45□□□□□ -1.22
LRRC28-216ENST00000559819 ZNF702PQ9H963 129 aa7.45□□□□□ -1.22
LRRC28-216ENST00000559819 ACACBO00763 2458 aa7.45□□□□□ -1.22
LRRC28-216ENST00000559819 ZFYVE26Q68DK2 2539 aa7.45□□□□□ -1.22
LRRC28-216ENST00000559819 HOXA3O43365 443 aaPredicted RBP7.45□□□□□ -1.22
LRRC28-216ENST00000559819 LGALS1P09382 135 aaKnown RBP7.45□□□□□ -1.22
LRRC28-216ENST00000559819 FABP2P12104 132 aa7.45□□□□□ -1.22
LRRC28-216ENST00000559819 HOXD3P31249 432 aaPredicted RBP7.45□□□□□ -1.22
LRRC28-216ENST00000559819 POLR2KP53803 58 aaKnown RBP7.45□□□□□ -1.22
LRRC28-216ENST00000559819 SNRPD3P62318 126 aaKnown RBP7.45□□□□□ -1.22
LRRC28-216ENST00000559819 C9orf85Q96MD7 179 aa7.45□□□□□ -1.22
LRRC28-216ENST00000559819 HIST1H4GQ99525 98 aa7.45□□□□□ -1.22
LRRC28-216ENST00000559819 VPREB3Q9UKI3 123 aa7.45□□□□□ -1.22
LRRC28-216ENST00000559819 CYSLTR1Q9Y271 337 aa7.45□□□□□ -1.22
LRRC28-216ENST00000559819 MYMXA0A1B0GTQ4 84 aa7.44□□□□□ -1.22
LRRC28-216ENST00000559819 SDHAF1A6NFY7 115 aa7.44□□□□□ -1.22
LRRC28-216ENST00000559819 ZNF56Q15929 161 aa7.44□□□□□ -1.22
LRRC28-216ENST00000559819 MORN3Q6PF18 240 aaPredicted RBP7.44□□□□□ -1.22
LRRC28-216ENST00000559819 PRADC1Q9BSG0 188 aa7.44□□□□□ -1.22
LRRC28-216ENST00000559819 ZNF256Q9Y2P7 627 aaPredicted RBP7.44□□□□□ -1.22
LRRC28-216ENST00000559819 PPP1R17O96001 155 aa7.44□□□□□ -1.22
LRRC28-216ENST00000559819 CD300EQ496F6 205 aaPredicted RBP7.44□□□□□ -1.22
LRRC28-216ENST00000559819 SAMD13Q5VXD3 122 aa7.44□□□□□ -1.22
LRRC28-216ENST00000559819 BBC3Q96PG8 261 aaPredicted RBP7.44□□□□□ -1.22
LRRC28-216ENST00000559819 ANKRD17O75179 2603 aaKnown RBP7.44□□□□□ -1.22
LRRC28-216ENST00000559819 IGLV4-69A0A075B6H9 119 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 TRBV7-3A0A075B6L6 115 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 IGHV1OR15-1A0A075B7D0 117 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 C11orf86A6NJI1 115 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 IGHV4-31P0DP07 118 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 COX6B1P14854 86 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 SLURP1P55000 103 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 PLEKHB2Q96CS7 222 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 FAM208BQ5VWN6 2430 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 TMEM89A2RUT3 159 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 IGIPA6NJ69 53 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 KNCNA6PVL3 124 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 J3QLI3 93 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 RBMY1A1P0DJD3 496 aaKnown RBP7.43□□□□□ -1.22
LRRC28-216ENST00000559819 RBMY1CP0DJD4 496 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 RBMY1FQ15415 496 aaKnown RBP7.43□□□□□ -1.22
LRRC28-216ENST00000559819 Q6YL49 198 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 KLHL30-AS1Q8NEE0 82 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 DUX3Q96PT4 197 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 VPS25Q9BRG1 176 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 ZNF462Q96JM2 2506 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 E9PLD3 99 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 LGALS9O00182 355 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 VCYO14598 125 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 PRM2P04554 102 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 C12orf74Q32Q52 190 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 TCTEX1D4Q5JR98 221 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 ODF3Q96PU9 254 aa7.43□□□□□ -1.22
LRRC28-216ENST00000559819 SORL1Q92673 2214 aa7.42□□□□□ -1.22
LRRC28-216ENST00000559819 IGLL5B9A064 214 aa7.42□□□□□ -1.22
LRRC28-216ENST00000559819 HTN1P15515 57 aa7.42□□□□□ -1.22
LRRC28-216ENST00000559819 KIR2DL4Q99706 377 aa7.42□□□□□ -1.22
LRRC28-216ENST00000559819 OPRPNQ99935 248 aaPredicted RBP7.42□□□□□ -1.22
LRRC28-216ENST00000559819 ZNF815PA8K554 130 aa7.42□□□□□ -1.22
LRRC28-216ENST00000559819 CIDEAO60543 219 aa7.42□□□□□ -1.22
LRRC28-216ENST00000559819 FSHBP01225 129 aa7.42□□□□□ -1.22
LRRC28-216ENST00000559819 ELANEP08246 267 aa7.42□□□□□ -1.22
LRRC28-216ENST00000559819 RPL32P62910 135 aaKnown RBP7.42□□□□□ -1.22
LRRC28-216ENST00000559819 AMTNQ6UX39 209 aa7.42□□□□□ -1.22
LRRC28-216ENST00000559819 CENPEQ02224 2701 aa7.41□□□□□ -1.22
LRRC28-216ENST00000559819 M0QY20 66 aa7.41□□□□□ -1.22
LRRC28-216ENST00000559819 TAL2Q16559 108 aa7.41□□□□□ -1.22
LRRC28-216ENST00000559819 SYT8Q8NBV8 401 aa7.41□□□□□ -1.22
LRRC28-216ENST00000559819 UBE2E2Q96LR5 201 aa7.41□□□□□ -1.22
LRRC28-216ENST00000559819 AKAP9Q99996 3911 aa7.41□□□□□ -1.22
LRRC28-216ENST00000559819 IGHV3-73A0A0B4J1V6 119 aa7.41□□□□□ -1.22
LRRC28-216ENST00000559819 OR5A1Q8NGJ0 315 aa7.41□□□□□ -1.22
LRRC28-216ENST00000559819 TRBV6-5A0A0K0K1A5 114 aa7.4□□□□□ -1.22
LRRC28-216ENST00000559819 K7ERU9 68 aa7.4□□□□□ -1.22
LRRC28-216ENST00000559819 SCGB2A2Q13296 93 aa7.4□□□□□ -1.22
LRRC28-216ENST00000559819 PMVKQ15126 192 aa7.4□□□□□ -1.22
LRRC28-216ENST00000559819 ZNF876PQ49A33 203 aa7.4□□□□□ -1.22
LRRC28-216ENST00000559819 FOXI2Q6ZQN5 318 aa7.4□□□□□ -1.22
LRRC28-216ENST00000559819 ZNRF2Q8NHG8 242 aa7.4□□□□□ -1.22
LRRC28-216ENST00000559819 TRBV27A0A0K0K1C4 114 aa7.4□□□□□ -1.23
LRRC28-216ENST00000559819 RIPPLY3P57055 190 aa7.4□□□□□ -1.23
LRRC28-216ENST00000559819 TSPEAR-AS2P59090 65 aa7.4□□□□□ -1.23
LRRC28-216ENST00000559819 DEFB131AP59861 70 aa7.4□□□□□ -1.23
LRRC28-216ENST00000559819 ZNF479Q96JC4 524 aa7.4□□□□□ -1.23
LRRC28-216ENST00000559819 LRRK2Q5S007 2527 aa7.39□□□□□ -1.23
LRRC28-216ENST00000559819 USP24Q9UPU5 2620 aa7.39□□□□□ -1.23
LRRC28-216ENST00000559819 RBMY1BA6NDE4 496 aaKnown RBP7.39□□□□□ -1.23
LRRC28-216ENST00000559819 RBMY1EA6NEQ0 496 aaKnown RBP7.39□□□□□ -1.23
LRRC28-216ENST00000559819 RBMY1DP0C7P1 496 aaKnown RBP7.39□□□□□ -1.23
LRRC28-216ENST00000559819 P0DMU3 169 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms