RNA–Protein interactions for RNA: ENST00000559257.5

USP3-211, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 2,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-211ENST00000559257 VMO1Q7Z5L0 202 aa6.27□□□□□ -1.41
USP3-211ENST00000559257 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.27□□□□□ -1.41
USP3-211ENST00000559257 BPESC1Q9GZL8 116 aa6.27□□□□□ -1.41
USP3-211ENST00000559257 NDUFA4L2Q9NRX3 87 aa6.27□□□□□ -1.41
USP3-211ENST00000559257 POLEQ07864 2286 aa6.27□□□□□ -1.41
USP3-211ENST00000559257 IGHV4-4A0A075B6R2 117 aa6.26□□□□□ -1.41
USP3-211ENST00000559257 GRPP07492 148 aa6.26□□□□□ -1.41
USP3-211ENST00000559257 VPREB1P12018 145 aa6.26□□□□□ -1.41
USP3-211ENST00000559257 ZNF80P51504 273 aaPredicted RBP6.26□□□□□ -1.41
USP3-211ENST00000559257 MIAQ16674 131 aa6.26□□□□□ -1.41
USP3-211ENST00000559257 ZNF876PQ49A33 203 aa6.26□□□□□ -1.41
USP3-211ENST00000559257 UNQ9165/PRO28630Q6UXU0 137 aa6.26□□□□□ -1.41
USP3-211ENST00000559257 C11orf68Q9H3H3 251 aaKnown RBP6.26□□□□□ -1.41
USP3-211ENST00000559257 SPRR3Q9UBC9 169 aa6.26□□□□□ -1.41
USP3-211ENST00000559257 IGHV3-43A0A0B4J1X8 118 aa6.26□□□□□ -1.41
USP3-211ENST00000559257 PSPNO60542 156 aa6.26□□□□□ -1.41
USP3-211ENST00000559257 TRBV12-3P01733 135 aa6.26□□□□□ -1.41
USP3-211ENST00000559257 IGHV3-43DP0DP04 118 aa6.26□□□□□ -1.41
USP3-211ENST00000559257 SUMO2P61956 95 aaKnown RBP6.26□□□□□ -1.41
USP3-211ENST00000559257 Q1T7F1 81 aa6.26□□□□□ -1.41
USP3-211ENST00000559257 Q8NA96 180 aa6.26□□□□□ -1.41
USP3-211ENST00000559257 TIMM17AQ99595 171 aa6.26□□□□□ -1.41
USP3-211ENST00000559257 DCTN5Q9BTE1 182 aa6.26□□□□□ -1.41
USP3-211ENST00000559257 DEFB127Q9H1M4 99 aa6.26□□□□□ -1.41
USP3-211ENST00000559257 KLK15Q9H2R5 256 aa6.26□□□□□ -1.41
USP3-211ENST00000559257 TRAV23DV6A0A075B6W5 121 aa6.25□□□□□ -1.41
USP3-211ENST00000559257 DEFB108AA8MXU0 73 aa6.25□□□□□ -1.41
USP3-211ENST00000559257 K7EMT4 169 aa6.25□□□□□ -1.41
USP3-211ENST00000559257 PATE4P0C8F1 98 aa6.25□□□□□ -1.41
USP3-211ENST00000559257 PDE6HQ13956 83 aa6.25□□□□□ -1.41
USP3-211ENST00000559257 FAM229BQ4G0N7 80 aa6.25□□□□□ -1.41
USP3-211ENST00000559257 RPL39P5Q59GN2 51 aa6.25□□□□□ -1.41
USP3-211ENST00000559257 RPP25Q9BUL9 199 aaKnown RBP6.25□□□□□ -1.41
USP3-211ENST00000559257 NACAE9PAV3 2078 aa6.25□□□□□ -1.41
USP3-211ENST00000559257 IGLV3-12A0A075B6K2 115 aa6.25□□□□□ -1.41
USP3-211ENST00000559257 M0R378 163 aa6.25□□□□□ -1.41
USP3-211ENST00000559257 DSCAMO60469 2012 aa6.24□□□□□ -1.41
USP3-211ENST00000559257 C8orf87E5RJ46 101 aa6.24□□□□□ -1.41
USP3-211ENST00000559257 M0R381 172 aa6.24□□□□□ -1.41
USP3-211ENST00000559257 PPP1R17O96001 155 aa6.24□□□□□ -1.41
USP3-211ENST00000559257 TSHBP01222 138 aa6.24□□□□□ -1.41
USP3-211ENST00000559257 OXLD1Q5BKU9 147 aa6.24□□□□□ -1.41
USP3-211ENST00000559257 OVOL2Q9BRP0 275 aa6.24□□□□□ -1.41
USP3-211ENST00000559257 LINC00588Q9Y4M8 146 aa6.24□□□□□ -1.41
USP3-211ENST00000559257 MIFP14174 115 aa6.23□□□□□ -1.41
USP3-211ENST00000559257 SOSTDC1Q6X4U4 206 aa6.23□□□□□ -1.41
USP3-211ENST00000559257 CXorf67Q86X51 503 aaPredicted RBP6.23□□□□□ -1.41
USP3-211ENST00000559257 RMI2Q96E14 147 aa6.23□□□□□ -1.41
USP3-211ENST00000559257 IGHV5-10-1A0A0J9YXX1 117 aa6.23□□□□□ -1.41
USP3-211ENST00000559257 LHBP01229 141 aa6.23□□□□□ -1.41
USP3-211ENST00000559257 RNASE4P34096 147 aaKnown RBP6.23□□□□□ -1.41
USP3-211ENST00000559257 Q6ZVQ6 151 aa6.23□□□□□ -1.41
USP3-211ENST00000559257 DYNLRB2Q8TF09 96 aa6.23□□□□□ -1.41
USP3-211ENST00000559257 PRRC2AP48634 2157 aaKnown RBP6.23□□□□□ -1.41
USP3-211ENST00000559257 IGKV1D-17A0A075B6S4 117 aa6.22□□□□□ -1.41
USP3-211ENST00000559257 E7EQL1 145 aa6.22□□□□□ -1.41
USP3-211ENST00000559257 TRGV3P03979 118 aa6.22□□□□□ -1.41
USP3-211ENST00000559257 MRPL36Q9P0J6 103 aaKnown RBP6.22□□□□□ -1.41
USP3-211ENST00000559257 LINC01565O15544 149 aa6.22□□□□□ -1.41
USP3-211ENST00000559257 DSCAML1Q8TD84 2053 aa6.21□□□□□ -1.41
USP3-211ENST00000559257 HTTP42858 3142 aa6.21□□□□□ -1.41
USP3-211ENST00000559257 TRAV12-3A0A0B4J271 114 aa6.21□□□□□ -1.42
USP3-211ENST00000559257 ERC2-IT1O76042 136 aa6.21□□□□□ -1.42
USP3-211ENST00000559257 UBE2BP63146 152 aa6.21□□□□□ -1.42
USP3-211ENST00000559257 PHF5AQ7RTV0 110 aaKnown RBP6.21□□□□□ -1.42
USP3-211ENST00000559257 ADARB2-AS1A8MUL3 147 aa6.21□□□□□ -1.42
USP3-211ENST00000559257 TFF2Q03403 129 aa6.21□□□□□ -1.42
USP3-211ENST00000559257 H3BRN7 92 aa6.2□□□□□ -1.42
USP3-211ENST00000559257 IGHV1-69P01742 117 aa6.2□□□□□ -1.42
USP3-211ENST00000559257 Q0VFX4 171 aa6.2□□□□□ -1.42
USP3-211ENST00000559257 SNURFQ9Y675 71 aa6.2□□□□□ -1.42
USP3-211ENST00000559257 RNF223E7ERA6 249 aa6.19□□□□□ -1.42
USP3-211ENST00000559257 SOCS3O14543 225 aa6.19□□□□□ -1.42
USP3-211ENST00000559257 UBE2L6O14933 153 aa6.19□□□□□ -1.42
USP3-211ENST00000559257 SAA1P0DJI8 122 aaPredicted RBP6.19□□□□□ -1.42
USP3-211ENST00000559257 CD59P13987 128 aa6.19□□□□□ -1.42
USP3-211ENST00000559257 DEFB133Q30KQ1 61 aa6.19□□□□□ -1.42
USP3-211ENST00000559257 PRR26Q8N8Z3 221 aa6.19□□□□□ -1.42
USP3-211ENST00000559257 DEFB126Q9BYW3 111 aa6.19□□□□□ -1.42
USP3-211ENST00000559257 IGHV3-15A0A0B4J1V0 119 aa6.19□□□□□ -1.42
USP3-211ENST00000559257 ZNF73O43830 326 aaPredicted RBP6.19□□□□□ -1.42
USP3-211ENST00000559257 SAA2P0DJI9 122 aaPredicted RBP6.19□□□□□ -1.42
USP3-211ENST00000559257 WT1-ASQ06250 92 aa6.19□□□□□ -1.42
USP3-211ENST00000559257 C1orf229Q6ZS94 237 aaPredicted RBP6.19□□□□□ -1.42
USP3-211ENST00000559257 Q6ZSV7 163 aa6.19□□□□□ -1.42
USP3-211ENST00000559257 CENPFP49454 3210 aa6.18□□□□□ -1.42
USP3-211ENST00000559257 TMEM256-PLSCR3K7ERE1 68 aa6.18□□□□□ -1.42
USP3-211ENST00000559257 LYZP61626 148 aa6.18□□□□□ -1.42
USP3-211ENST00000559257 C14orf132Q9NPU4 83 aa6.18□□□□□ -1.42
USP3-211ENST00000559257 TRBV7-4A0A0J9YYF1 115 aa6.18□□□□□ -1.42
USP3-211ENST00000559257 CD28P10747 220 aa6.18□□□□□ -1.42
USP3-211ENST00000559257 TMEM167AQ8TBQ9 72 aa6.18□□□□□ -1.42
USP3-211ENST00000559257 PHLDA3Q9Y5J5 127 aa6.18□□□□□ -1.42
USP3-211ENST00000559257 IGHV7-4-1A0A0J9YVY3 117 aa6.17□□□□□ -1.42
USP3-211ENST00000559257 Q6ZS52 159 aa6.17□□□□□ -1.42
USP3-211ENST00000559257 SPATA3Q8NHX4 192 aa6.17□□□□□ -1.42
USP3-211ENST00000559257 FREM1Q5H8C1 2179 aa6.17□□□□□ -1.42
USP3-211ENST00000559257 ECSCRQ19T08 205 aa6.17□□□□□ -1.42
USP3-211ENST00000559257 HIST2H2BCQ6DN03 193 aa6.17□□□□□ -1.42
USP3-211ENST00000559257 HIST2H2BDQ6DRA6 164 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms