RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 EPDR1Q9UM22 224 aa4.94□□□□□ -1.62
SPG11-213ENST00000558988 HERC2O95714 4834 aa4.94□□□□□ -1.62
SPG11-213ENST00000558988 DNAH10Q8IVF4 4471 aa4.93□□□□□ -1.62
SPG11-213ENST00000558988 TRAV8-6A0A0B4J262 113 aa4.93□□□□□ -1.62
SPG11-213ENST00000558988 IGHV3-38A0A0C4DH36 116 aa4.93□□□□□ -1.62
SPG11-213ENST00000558988 SERTM2A0A1B0GWG4 89 aa4.93□□□□□ -1.62
SPG11-213ENST00000558988 GAGE12JA6NER3 117 aa4.93□□□□□ -1.62
SPG11-213ENST00000558988 EPM2AB3EWF7 344 aa4.93□□□□□ -1.62
SPG11-213ENST00000558988 M0R036 132 aa4.93□□□□□ -1.62
SPG11-213ENST00000558988 PTTG1O95997 202 aa4.93□□□□□ -1.62
SPG11-213ENST00000558988 MBP02144 154 aa4.93□□□□□ -1.62
SPG11-213ENST00000558988 PFN1P07737 140 aaKnown RBP4.93□□□□□ -1.62
SPG11-213ENST00000558988 KRTAP10-1P60331 282 aa4.93□□□□□ -1.62
SPG11-213ENST00000558988 GAGE1Q13065 139 aa4.93□□□□□ -1.62
SPG11-213ENST00000558988 GAGE4Q13068 117 aa4.93□□□□□ -1.62
SPG11-213ENST00000558988 GAGE5Q13069 117 aa4.93□□□□□ -1.62
SPG11-213ENST00000558988 TWIST1Q15672 202 aa4.93□□□□□ -1.62
SPG11-213ENST00000558988 LGALSLQ3ZCW2 172 aaPredicted RBP4.93□□□□□ -1.62
SPG11-213ENST00000558988 CFAP126Q5VTH2 177 aa4.93□□□□□ -1.62
SPG11-213ENST00000558988 C10orf126Q8N4M7 172 aa4.93□□□□□ -1.62
SPG11-213ENST00000558988 CYB561D1Q8N8Q1 229 aa4.93□□□□□ -1.62
SPG11-213ENST00000558988 OR2T35Q8NGX2 323 aa4.93□□□□□ -1.62
SPG11-213ENST00000558988 AQP10Q96PS8 301 aa4.93□□□□□ -1.62
SPG11-213ENST00000558988 TMEM167BQ9NRX6 74 aa4.93□□□□□ -1.62
SPG11-213ENST00000558988 TMSB15BA0A087X1C1 80 aa4.92□□□□□ -1.62
SPG11-213ENST00000558988 GRIFINA4D1Z8 144 aa4.92□□□□□ -1.62
SPG11-213ENST00000558988 H3BVH4 76 aa4.92□□□□□ -1.62
SPG11-213ENST00000558988 RS1O15537 224 aa4.92□□□□□ -1.62
SPG11-213ENST00000558988 IGLV2-11P01706 119 aa4.92□□□□□ -1.62
SPG11-213ENST00000558988 SMR3BP02814 79 aaPredicted RBP4.92□□□□□ -1.62
SPG11-213ENST00000558988 ASIPP42127 132 aa4.92□□□□□ -1.62
SPG11-213ENST00000558988 SERF2P84101 59 aa4.92□□□□□ -1.62
SPG11-213ENST00000558988 RHOHQ15669 191 aa4.92□□□□□ -1.62
SPG11-213ENST00000558988 AKR1C8PQ5T2L2 129 aa4.92□□□□□ -1.62
SPG11-213ENST00000558988 FAM74A4Q5TZK3 123 aa4.92□□□□□ -1.62
SPG11-213ENST00000558988 SH2D6Q7Z4S9 175 aa4.92□□□□□ -1.62
SPG11-213ENST00000558988 ATP6V0E2Q8NHE4 81 aa4.92□□□□□ -1.62
SPG11-213ENST00000558988 C9orf85Q96MD7 179 aa4.92□□□□□ -1.62
SPG11-213ENST00000558988 ARL2-SNX15V9GYD0 113 aa4.92□□□□□ -1.62
SPG11-213ENST00000558988 PCLOQ9Y6V0 5065 aa4.92□□□□□ -1.62
SPG11-213ENST00000558988 HECTD4Q9Y4D8 3996 aa4.91□□□□□ -1.62
SPG11-213ENST00000558988 IGLV5-52A0A0A0MRZ9 124 aa4.91□□□□□ -1.62
SPG11-213ENST00000558988 CTXND1A0A1B0GTU2 59 aa4.91□□□□□ -1.62
SPG11-213ENST00000558988 A0A1B0GV50 99 aa4.91□□□□□ -1.62
SPG11-213ENST00000558988 RNF222A6NCQ9 220 aa4.91□□□□□ -1.62
SPG11-213ENST00000558988 B4DEV8 164 aa4.91□□□□□ -1.62
SPG11-213ENST00000558988 PEX7O00628 323 aa4.91□□□□□ -1.62
SPG11-213ENST00000558988 LECT2O14960 151 aa4.91□□□□□ -1.62
SPG11-213ENST00000558988 ARPC5O15511 151 aa4.91□□□□□ -1.62
SPG11-213ENST00000558988 GIPP09681 153 aaPredicted RBP4.91□□□□□ -1.62
SPG11-213ENST00000558988 MGST1P10620 155 aaKnown RBP4.91□□□□□ -1.62
SPG11-213ENST00000558988 RNASE3P12724 160 aaKnown RBP4.91□□□□□ -1.62
SPG11-213ENST00000558988 ZNF726P1Q15940 193 aa4.91□□□□□ -1.62
SPG11-213ENST00000558988 ZNF674Q2M3X9 581 aa4.91□□□□□ -1.62
SPG11-213ENST00000558988 SAPCD1Q5SSQ6 148 aa4.91□□□□□ -1.62
SPG11-213ENST00000558988 Q86TA4 180 aa4.91□□□□□ -1.62
SPG11-213ENST00000558988 ARL6IP6Q8N6S5 226 aa4.91□□□□□ -1.62
SPG11-213ENST00000558988 JPT2Q9H910 190 aa4.91□□□□□ -1.62
SPG11-213ENST00000558988 BATF3Q9NR55 127 aa4.91□□□□□ -1.62
SPG11-213ENST00000558988 TNFSF18Q9UNG2 199 aa4.91□□□□□ -1.62
SPG11-213ENST00000558988 DNAH6Q9C0G6 4158 aa4.9□□□□□ -1.62
SPG11-213ENST00000558988 IGKV3D-20A0A0C4DH25 116 aa4.9□□□□□ -1.63
SPG11-213ENST00000558988 TRBV6-4A0A1B0GX49 114 aa4.9□□□□□ -1.63
SPG11-213ENST00000558988 A0A1W2PRE2 83 aa4.9□□□□□ -1.63
SPG11-213ENST00000558988 MAP1LC3B2A6NCE7 125 aa4.9□□□□□ -1.63
SPG11-213ENST00000558988 SMLR1H3BR10 107 aa4.9□□□□□ -1.63
SPG11-213ENST00000558988 M0R381 172 aa4.9□□□□□ -1.63
SPG11-213ENST00000558988 XGP55808 180 aa4.9□□□□□ -1.63
SPG11-213ENST00000558988 UBE2G1P62253 170 aa4.9□□□□□ -1.63
SPG11-213ENST00000558988 LINC01556Q5JQF7 62 aa4.9□□□□□ -1.63
SPG11-213ENST00000558988 LELP1Q5T871 98 aa4.9□□□□□ -1.63
SPG11-213ENST00000558988 Q5VSD8 79 aa4.9□□□□□ -1.63
SPG11-213ENST00000558988 CST9LP1Q5W188 147 aa4.9□□□□□ -1.63
SPG11-213ENST00000558988 FRZBQ92765 325 aa4.9□□□□□ -1.63
SPG11-213ENST00000558988 SAMD10Q9BYL1 202 aa4.9□□□□□ -1.63
SPG11-213ENST00000558988 MAP1LC3BQ9GZQ8 125 aa4.9□□□□□ -1.63
SPG11-213ENST00000558988 GTSF1LQ9H1H1 148 aa4.9□□□□□ -1.63
SPG11-213ENST00000558988 PARLQ9H300 379 aa4.9□□□□□ -1.63
SPG11-213ENST00000558988 FAM74A7A6NL05 159 aa4.89□□□□□ -1.63
SPG11-213ENST00000558988 FABP5P3A8MUU1 101 aa4.89□□□□□ -1.63
SPG11-213ENST00000558988 K7EP13 123 aa4.89□□□□□ -1.63
SPG11-213ENST00000558988 SH2D1AO60880 128 aa4.89□□□□□ -1.63
SPG11-213ENST00000558988 INAFM2P0DMQ5 153 aa4.89□□□□□ -1.63
SPG11-213ENST00000558988 CAMPP49913 170 aa4.89□□□□□ -1.63
SPG11-213ENST00000558988 SSTP61278 116 aa4.89□□□□□ -1.63
SPG11-213ENST00000558988 C14orf178Q8N769 122 aaPredicted RBP4.89□□□□□ -1.63
SPG11-213ENST00000558988 OR11H4Q8NGC9 324 aa4.89□□□□□ -1.63
SPG11-213ENST00000558988 SUN5Q8TC36 379 aa4.89□□□□□ -1.63
SPG11-213ENST00000558988 ZC2HC1AQ96GY0 325 aa4.89□□□□□ -1.63
SPG11-213ENST00000558988 Q9UF83 564 aa4.89□□□□□ -1.63
SPG11-213ENST00000558988 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.88□□□□□ -1.63
SPG11-213ENST00000558988 A8MWV9 139 aa4.88□□□□□ -1.63
SPG11-213ENST00000558988 IBA57-AS1B1ANH7 110 aa4.88□□□□□ -1.63
SPG11-213ENST00000558988 USP17L23D6RBM5 183 aa4.88□□□□□ -1.63
SPG11-213ENST00000558988 ARMS2P0C7Q2 107 aa4.88□□□□□ -1.63
SPG11-213ENST00000558988 TPT1P13693 172 aaKnown RBP4.88□□□□□ -1.63
SPG11-213ENST00000558988 AKR1C3P42330 323 aa4.88□□□□□ -1.63
SPG11-213ENST00000558988 FHITP49789 147 aa4.88□□□□□ -1.63
SPG11-213ENST00000558988 FAM162BQ5T6X4 162 aa4.88□□□□□ -1.63
SPG11-213ENST00000558988 SERTAD4-AS1Q5TG53 156 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms