RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 IGLC6P0CF74 106 aa11.27□□□□□ -0.61
CDC42BPB-203ENST00000558867 HOXA5P20719 270 aa11.27□□□□□ -0.61
CDC42BPB-203ENST00000558867 MRPL54Q6P161 138 aaKnown RBP11.27□□□□□ -0.61
CDC42BPB-203ENST00000558867 CNFNQ9BYD5 112 aa11.27□□□□□ -0.61
CDC42BPB-203ENST00000558867 KLLNB2CW77 178 aa11.26□□□□□ -0.61
CDC42BPB-203ENST00000558867 PRB4P10163 310 aaPredicted RBP11.26□□□□□ -0.61
CDC42BPB-203ENST00000558867 SNRPEP62304 92 aaKnown RBP11.26□□□□□ -0.61
CDC42BPB-203ENST00000558867 RIGQ13278 110 aa11.26□□□□□ -0.61
CDC42BPB-203ENST00000558867 C1orf158Q8N1D5 194 aa11.26□□□□□ -0.61
CDC42BPB-203ENST00000558867 TRAV21A0A0B4J279 112 aa11.25□□□□□ -0.61
CDC42BPB-203ENST00000558867 NUDT3O95989 172 aa11.25□□□□□ -0.61
CDC42BPB-203ENST00000558867 ZNRF2Q8NHG8 242 aa11.25□□□□□ -0.61
CDC42BPB-203ENST00000558867 PGLYRP4Q96LB8 373 aa11.25□□□□□ -0.61
CDC42BPB-203ENST00000558867 F2Z2F3 143 aa11.24□□□□□ -0.61
CDC42BPB-203ENST00000558867 F5H768 121 aa11.24□□□□□ -0.61
CDC42BPB-203ENST00000558867 GZMBP10144 247 aa11.24□□□□□ -0.61
CDC42BPB-203ENST00000558867 LEPP41159 167 aa11.24□□□□□ -0.61
CDC42BPB-203ENST00000558867 DEFB1P60022 68 aa11.24□□□□□ -0.61
CDC42BPB-203ENST00000558867 DNLZQ5SXM8 178 aa11.24□□□□□ -0.61
CDC42BPB-203ENST00000558867 BORCS7Q96B45 105 aa11.24□□□□□ -0.61
CDC42BPB-203ENST00000558867 LRP1BQ9NZR2 4599 aa11.24□□□□□ -0.61
CDC42BPB-203ENST00000558867 IGKV3D-20A0A0C4DH25 116 aa11.23□□□□□ -0.61
CDC42BPB-203ENST00000558867 F6UB75 175 aa11.23□□□□□ -0.61
CDC42BPB-203ENST00000558867 SPINK4O60575 86 aa11.23□□□□□ -0.61
CDC42BPB-203ENST00000558867 ORM1P02763 201 aa11.23□□□□□ -0.61
CDC42BPB-203ENST00000558867 DEFB130BP0DP73 79 aa11.23□□□□□ -0.61
CDC42BPB-203ENST00000558867 DEFB130AP0DP74 79 aa11.23□□□□□ -0.61
CDC42BPB-203ENST00000558867 NDUFA6P56556 154 aa11.23□□□□□ -0.61
CDC42BPB-203ENST00000558867 Q0VG73 95 aa11.23□□□□□ -0.61
CDC42BPB-203ENST00000558867 TTC32Q5I0X7 151 aa11.23□□□□□ -0.61
CDC42BPB-203ENST00000558867 PRR9Q5T870 116 aa11.23□□□□□ -0.61
CDC42BPB-203ENST00000558867 ZNF493Q6ZR52 646 aa11.23□□□□□ -0.61
CDC42BPB-203ENST00000558867 SPATA12Q7Z6I5 190 aa11.23□□□□□ -0.61
CDC42BPB-203ENST00000558867 FER1L6-AS1Q8NA97 138 aa11.23□□□□□ -0.61
CDC42BPB-203ENST00000558867 INSP01308 110 aa11.22□□□□□ -0.61
CDC42BPB-203ENST00000558867 APCSP02743 223 aa11.22□□□□□ -0.61
CDC42BPB-203ENST00000558867 ATP5G1P05496 136 aa11.22□□□□□ -0.61
CDC42BPB-203ENST00000558867 GPX1P07203 203 aa11.22□□□□□ -0.61
CDC42BPB-203ENST00000558867 ARMS2P0C7Q2 107 aa11.22□□□□□ -0.61
CDC42BPB-203ENST00000558867 TSPOP30536 169 aa11.22□□□□□ -0.61
CDC42BPB-203ENST00000558867 SSBP4Q9BWG4 385 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPB-203ENST00000558867 C11orf21Q9P2W6 132 aa11.22□□□□□ -0.61
CDC42BPB-203ENST00000558867 SNAI2O43623 268 aa11.21□□□□□ -0.61
CDC42BPB-203ENST00000558867 OR5AL1P0C617 328 aa11.21□□□□□ -0.61
CDC42BPB-203ENST00000558867 RAB4BP61018 213 aa11.21□□□□□ -0.61
CDC42BPB-203ENST00000558867 OR10J3Q5JRS4 329 aa11.21□□□□□ -0.61
CDC42BPB-203ENST00000558867 LYZL1Q6UWQ5 148 aa11.21□□□□□ -0.61
CDC42BPB-203ENST00000558867 CBY3A6NI87 242 aa11.2□□□□□ -0.62
CDC42BPB-203ENST00000558867 SLAQ13239 276 aa11.2□□□□□ -0.62
CDC42BPB-203ENST00000558867 DMRTA1Q5VZB9 504 aa11.2□□□□□ -0.62
CDC42BPB-203ENST00000558867 AMTNQ6UX39 209 aa11.2□□□□□ -0.62
CDC42BPB-203ENST00000558867 HIST3H2BBQ8N257 126 aa11.2□□□□□ -0.62
CDC42BPB-203ENST00000558867 TMSB15BA0A087X1C1 80 aa11.19□□□□□ -0.62
CDC42BPB-203ENST00000558867 ESDP10768 282 aa11.19□□□□□ -0.62
CDC42BPB-203ENST00000558867 CAMPP49913 170 aa11.19□□□□□ -0.62
CDC42BPB-203ENST00000558867 TDRG1Q3Y452 100 aa11.19□□□□□ -0.62
CDC42BPB-203ENST00000558867 Q9H8V8 135 aa11.19□□□□□ -0.62
CDC42BPB-203ENST00000558867 LINC00588Q9Y4M8 146 aa11.19□□□□□ -0.62
CDC42BPB-203ENST00000558867 C7orf71A4D174 169 aa11.18□□□□□ -0.62
CDC42BPB-203ENST00000558867 BTF3P20290 206 aaKnown RBP11.18□□□□□ -0.62
CDC42BPB-203ENST00000558867 CDKN1BP46527 198 aa11.18□□□□□ -0.62
CDC42BPB-203ENST00000558867 TMEM256Q8N2U0 113 aa11.18□□□□□ -0.62
CDC42BPB-203ENST00000558867 KCNS1Q96KK3 526 aa11.18□□□□□ -0.62
CDC42BPB-203ENST00000558867 EPM2AB3EWF7 344 aa11.17□□□□□ -0.62
CDC42BPB-203ENST00000558867 ZNF324O75467 553 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPB-203ENST00000558867 RNASE4P34096 147 aaKnown RBP11.17□□□□□ -0.62
CDC42BPB-203ENST00000558867 CACNG7P62955 275 aa11.17□□□□□ -0.62
CDC42BPB-203ENST00000558867 SPINK13Q1W4C9 94 aa11.17□□□□□ -0.62
CDC42BPB-203ENST00000558867 ALKBH7Q9BT30 221 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPB-203ENST00000558867 TMEM191AQ9H0A3 160 aa11.17□□□□□ -0.62
CDC42BPB-203ENST00000558867 APOBP04114 4563 aaKnown RBP11.17□□□□□ -0.62
CDC42BPB-203ENST00000558867 DNAH5Q8TE73 4624 aa11.16□□□□□ -0.62
CDC42BPB-203ENST00000558867 PACRGQ96M98 296 aaPredicted RBP11.16□□□□□ -0.62
CDC42BPB-203ENST00000558867 LINC01587Q99440 93 aa11.16□□□□□ -0.62
CDC42BPB-203ENST00000558867 TIMM8BQ9Y5J9 83 aaPredicted RBP11.16□□□□□ -0.62
CDC42BPB-203ENST00000558867 HERC1Q15751 4861 aa11.15□□□□□ -0.62
CDC42BPB-203ENST00000558867 GRIFINA4D1Z8 144 aa11.15□□□□□ -0.62
CDC42BPB-203ENST00000558867 IFITM10A6NMD0 228 aa11.15□□□□□ -0.62
CDC42BPB-203ENST00000558867 M0R2Z0 102 aa11.15□□□□□ -0.62
CDC42BPB-203ENST00000558867 SRIP30626 198 aa11.15□□□□□ -0.62
CDC42BPB-203ENST00000558867 ASIPP42127 132 aa11.15□□□□□ -0.62
CDC42BPB-203ENST00000558867 ANXA2RQ3ZCQ2 193 aa11.15□□□□□ -0.62
CDC42BPB-203ENST00000558867 GFI1BQ5VTD9 330 aa11.15□□□□□ -0.62
CDC42BPB-203ENST00000558867 C16orf74Q96GX8 76 aa11.15□□□□□ -0.62
CDC42BPB-203ENST00000558867 C20orf144Q9BQM9 153 aa11.15□□□□□ -0.62
CDC42BPB-203ENST00000558867 TP53TG3Q9ULZ0 132 aa11.15□□□□□ -0.62
CDC42BPB-203ENST00000558867 DMBT1Q9UGM3 2413 aaPredicted RBP11.15□□□□□ -0.63
CDC42BPB-203ENST00000558867 NTF3P20783 257 aa11.14□□□□□ -0.63
CDC42BPB-203ENST00000558867 FAM104BQ5XKR9 115 aa11.14□□□□□ -0.63
CDC42BPB-203ENST00000558867 C18orf32Q8TCD1 76 aa11.14□□□□□ -0.63
CDC42BPB-203ENST00000558867 TPPP3Q9BW30 176 aa11.14□□□□□ -0.63
CDC42BPB-203ENST00000558867 EREGO14944 169 aa11.13□□□□□ -0.63
CDC42BPB-203ENST00000558867 NXPH4O95158 308 aa11.13□□□□□ -0.63
CDC42BPB-203ENST00000558867 S100A2P29034 98 aa11.13□□□□□ -0.63
CDC42BPB-203ENST00000558867 KIR3DS1Q14943 382 aa11.13□□□□□ -0.63
CDC42BPB-203ENST00000558867 KIAA1644Q3SXP7 199 aa11.13□□□□□ -0.63
CDC42BPB-203ENST00000558867 FAM159AQ6UWV7 190 aa11.13□□□□□ -0.63
CDC42BPB-203ENST00000558867 Q6ZQT7 251 aa11.13□□□□□ -0.63
CDC42BPB-203ENST00000558867 LINC00467Q9BRT7 94 aa11.13□□□□□ -0.63
CDC42BPB-203ENST00000558867 CRXO43186 299 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms