RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	FUS	P35637	526 aa	Known RBP eCLIP	4.81	□□□□□ -1.64	2e-6	■□□□□ 8.1
MARK3-215	ENST00000558787	TMEM241	Q24JQ0	296 aa		4.81	□□□□□ -1.64
MARK3-215	ENST00000558787	CENPW	Q5EE01	88 aa		4.81	□□□□□ -1.64
MARK3-215	ENST00000558787	SPATA12	Q7Z6I5	190 aa		4.81	□□□□□ -1.64
MARK3-215	ENST00000558787	PRNT	Q86SH4	94 aa		4.81	□□□□□ -1.64
MARK3-215	ENST00000558787	BAGE2	Q86Y30	109 aa		4.81	□□□□□ -1.64
MARK3-215	ENST00000558787	TMEM183A	Q8IXX5	376 aa		4.81	□□□□□ -1.64
MARK3-215	ENST00000558787	SLC7A5P1	Q8MH63	180 aa		4.81	□□□□□ -1.64
MARK3-215	ENST00000558787	ZFAND2A	Q8N6M9	145 aa		4.81	□□□□□ -1.64
MARK3-215	ENST00000558787		Q8TAT8	98 aa		4.81	□□□□□ -1.64
MARK3-215	ENST00000558787	DERL1	Q9BUN8	251 aa		4.81	□□□□□ -1.64
MARK3-215	ENST00000558787	SEC11C	Q9BY50	192 aa		4.81	□□□□□ -1.64
MARK3-215	ENST00000558787	MRPL16	Q9NX20	251 aa	Known RBP	4.81	□□□□□ -1.64
MARK3-215	ENST00000558787	NAT8	Q9UHE5	227 aa		4.81	□□□□□ -1.64
MARK3-215	ENST00000558787		A0A096LPF7	62 aa		4.8	□□□□□ -1.64
MARK3-215	ENST00000558787		F8W036	122 aa		4.8	□□□□□ -1.64
MARK3-215	ENST00000558787	CRISP2	P16562	243 aa		4.8	□□□□□ -1.64
MARK3-215	ENST00000558787	PNRC1	Q12796	327 aa	Predicted RBP	4.8	□□□□□ -1.64
MARK3-215	ENST00000558787	SMUG1	Q53HV7	270 aa		4.8	□□□□□ -1.64
MARK3-215	ENST00000558787	COX8C	Q7Z4L0	72 aa		4.8	□□□□□ -1.64
MARK3-215	ENST00000558787	MRPS16	Q9Y3D3	137 aa	Known RBP	4.8	□□□□□ -1.64
MARK3-215	ENST00000558787	IGHV1OR15-1	A0A075B7D0	117 aa		4.79	□□□□□ -1.64
MARK3-215	ENST00000558787		H3BNG1	76 aa		4.79	□□□□□ -1.64
MARK3-215	ENST00000558787	SPINK4	O60575	86 aa		4.79	□□□□□ -1.64
MARK3-215	ENST00000558787	ANXA2R	Q3ZCQ2	193 aa		4.79	□□□□□ -1.64
MARK3-215	ENST00000558787	MUC21	Q5SSG8	566 aa		4.79	□□□□□ -1.64
MARK3-215	ENST00000558787	C10orf91	Q5T1B1	145 aa		4.79	□□□□□ -1.64
MARK3-215	ENST00000558787	FAM162B	Q5T6X4	162 aa		4.79	□□□□□ -1.64
MARK3-215	ENST00000558787	LINC01551	Q86U37	167 aa		4.79	□□□□□ -1.64
MARK3-215	ENST00000558787	MAPKAPK5-AS1	Q8N8E1	139 aa		4.79	□□□□□ -1.64
MARK3-215	ENST00000558787	TVP23C	Q96ET8	276 aa		4.79	□□□□□ -1.64
MARK3-215	ENST00000558787	SGK494	Q96LW2	274 aa		4.79	□□□□□ -1.64
MARK3-215	ENST00000558787	LINC00467	Q9BRT7	94 aa		4.79	□□□□□ -1.64
MARK3-215	ENST00000558787	UPK3B	Q9BT76	320 aa		4.79	□□□□□ -1.64
MARK3-215	ENST00000558787	SDF2L1	Q9HCN8	221 aa		4.79	□□□□□ -1.64
MARK3-215	ENST00000558787	MDFIC	Q9P1T7	246 aa		4.79	□□□□□ -1.64
MARK3-215	ENST00000558787	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.79	□□□□□ -1.64
MARK3-215	ENST00000558787	TRBV20OR9-2	A0A075B6H5	130 aa		4.78	□□□□□ -1.64
MARK3-215	ENST00000558787	TRAV21	A0A0B4J279	112 aa		4.78	□□□□□ -1.64
MARK3-215	ENST00000558787		B4DEV8	164 aa		4.78	□□□□□ -1.64
MARK3-215	ENST00000558787	NXPH4	O95158	308 aa		4.78	□□□□□ -1.64
MARK3-215	ENST00000558787	IGLV2-8	P01709	118 aa		4.78	□□□□□ -1.64
MARK3-215	ENST00000558787	MGST1	P10620	155 aa	Known RBP	4.78	□□□□□ -1.64
MARK3-215	ENST00000558787	ADCYAP1	P18509	176 aa		4.78	□□□□□ -1.64
MARK3-215	ENST00000558787	TCL1A	P56279	114 aa		4.78	□□□□□ -1.64
MARK3-215	ENST00000558787	LINC00315	P59091	139 aa		4.78	□□□□□ -1.64
MARK3-215	ENST00000558787	ADIRF	Q15847	76 aa		4.78	□□□□□ -1.64
MARK3-215	ENST00000558787	TTC32	Q5I0X7	151 aa		4.78	□□□□□ -1.64
MARK3-215	ENST00000558787		Q6AWC8	147 aa		4.78	□□□□□ -1.64
MARK3-215	ENST00000558787	SVBP	Q8N300	66 aa		4.78	□□□□□ -1.64
MARK3-215	ENST00000558787	OCC1	Q8TAD7	63 aa		4.78	□□□□□ -1.64
MARK3-215	ENST00000558787	DAZAP1	Q96EP5	407 aa	Known RBP	4.78	□□□□□ -1.64
MARK3-215	ENST00000558787	HHLA3	Q9XRX5	114 aa		4.78	□□□□□ -1.64
MARK3-215	ENST00000558787	FABP5P3	A8MUU1	101 aa		4.77	□□□□□ -1.65
MARK3-215	ENST00000558787	CDK2AP2	O75956	126 aa		4.77	□□□□□ -1.65
MARK3-215	ENST00000558787	GCG	P01275	180 aa		4.77	□□□□□ -1.65
MARK3-215	ENST00000558787	PFN1	P07737	140 aa	Known RBP	4.77	□□□□□ -1.65
MARK3-215	ENST00000558787	CRYBA4	P53673	196 aa		4.77	□□□□□ -1.65
MARK3-215	ENST00000558787	ERVFC1-1	P60608	527 aa		4.77	□□□□□ -1.65
MARK3-215	ENST00000558787	RPL23	P62829	140 aa	Known RBP	4.77	□□□□□ -1.65
MARK3-215	ENST00000558787	PRR27	Q6MZM9	219 aa		4.77	□□□□□ -1.65
MARK3-215	ENST00000558787	LYPD5	Q6UWN5	251 aa		4.77	□□□□□ -1.65
MARK3-215	ENST00000558787	FAM231D	Q6ZW35	169 aa		4.77	□□□□□ -1.65
MARK3-215	ENST00000558787	C15orf54	Q8N8G6	183 aa		4.77	□□□□□ -1.65
MARK3-215	ENST00000558787	NHLRC2	Q8NBF2	726 aa		4.77	□□□□□ -1.65
MARK3-215	ENST00000558787	ISOC2	Q96AB3	205 aa		4.77	□□□□□ -1.65
MARK3-215	ENST00000558787	ZC2HC1A	Q96GY0	325 aa		4.77	□□□□□ -1.65
MARK3-215	ENST00000558787	SFRP2	Q96HF1	295 aa		4.77	□□□□□ -1.65
MARK3-215	ENST00000558787	C18orf15	Q96N68	181 aa		4.77	□□□□□ -1.65
MARK3-215	ENST00000558787	SCRT2	Q9NQ03	307 aa		4.77	□□□□□ -1.65
MARK3-215	ENST00000558787		A0A1W2PPQ1	181 aa		4.76	□□□□□ -1.65
MARK3-215	ENST00000558787	XKRY2	A2RUG3	117 aa		4.76	□□□□□ -1.65
MARK3-215	ENST00000558787	PGPEP1L	A6NFU8	196 aa		4.76	□□□□□ -1.65
MARK3-215	ENST00000558787		K7EN84	100 aa		4.76	□□□□□ -1.65
MARK3-215	ENST00000558787		M0R036	132 aa		4.76	□□□□□ -1.65
MARK3-215	ENST00000558787	PPP1R2P9	O14990	202 aa		4.76	□□□□□ -1.65
MARK3-215	ENST00000558787	SIVA1	O15304	175 aa		4.76	□□□□□ -1.65
MARK3-215	ENST00000558787	GNRH2	O43555	120 aa		4.76	□□□□□ -1.65
MARK3-215	ENST00000558787	SH2D1A	O60880	128 aa		4.76	□□□□□ -1.65
MARK3-215	ENST00000558787	SNAPIN	O95295	136 aa		4.76	□□□□□ -1.65
MARK3-215	ENST00000558787		P01737	135 aa		4.76	□□□□□ -1.65
MARK3-215	ENST00000558787	APOC3	P02656	99 aa		4.76	□□□□□ -1.65
MARK3-215	ENST00000558787	MT-ND4L	P03901	98 aa		4.76	□□□□□ -1.65
MARK3-215	ENST00000558787	S100A1	P23297	94 aa		4.76	□□□□□ -1.65
MARK3-215	ENST00000558787	RHEB	Q15382	184 aa		4.76	□□□□□ -1.65
MARK3-215	ENST00000558787	IBA57	Q5T440	356 aa	Known RBP	4.76	□□□□□ -1.65
MARK3-215	ENST00000558787		Q6ZRN7	208 aa	Predicted RBP	4.76	□□□□□ -1.65
MARK3-215	ENST00000558787	ZNF479	Q96JC4	524 aa		4.76	□□□□□ -1.65
MARK3-215	ENST00000558787	OSTC	Q9NRP0	149 aa		4.76	□□□□□ -1.65
MARK3-215	ENST00000558787	PRO0255	Q9UI72	69 aa		4.76	□□□□□ -1.65
MARK3-215	ENST00000558787	NAGK	Q9UJ70	344 aa		4.76	□□□□□ -1.65
MARK3-215	ENST00000558787	ICOS	Q9Y6W8	199 aa		4.76	□□□□□ -1.65
MARK3-215	ENST00000558787	TRGV4	A0A0C4DH28	118 aa		4.75	□□□□□ -1.65
MARK3-215	ENST00000558787	LOC100131303	A0A0U1RQF7	123 aa		4.75	□□□□□ -1.65
MARK3-215	ENST00000558787	C19orf71	A6NCJ1	209 aa		4.75	□□□□□ -1.65
MARK3-215	ENST00000558787	GATC	O43716	136 aa	Known RBP	4.75	□□□□□ -1.65
MARK3-215	ENST00000558787	ATP6V1G1	O75348	118 aa		4.75	□□□□□ -1.65
MARK3-215	ENST00000558787	GCSH	P23434	173 aa		4.75	□□□□□ -1.65
MARK3-215	ENST00000558787	CRIP1	P50238	77 aa		4.75	□□□□□ -1.65
MARK3-215	ENST00000558787	ZNF80	P51504	273 aa	Predicted RBP	4.75	□□□□□ -1.65

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