RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 LEAP2Q969E1 77 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 UBE2WQ96B02 151 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 TIMD4Q96H15 378 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 C21orf62Q9NYP8 219 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 KLK9Q9UKQ9 250 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 CHD7Q9P2D1 2997 aa2.38□□□□□ -2.03
HERC1-203ENST00000558532 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.37□□□□□ -2.03
HERC1-203ENST00000558532 TRAV2A0A0B4J234 112 aa2.37□□□□□ -2.03
HERC1-203ENST00000558532 IGKV3D-20A0A0C4DH25 116 aa2.37□□□□□ -2.03
HERC1-203ENST00000558532 IGHV1-18A0A0C4DH31 117 aa2.37□□□□□ -2.03
HERC1-203ENST00000558532 IGHV3-64DA0A0J9YX35 117 aa2.37□□□□□ -2.03
HERC1-203ENST00000558532 NDUFAF8A1L188 74 aa2.37□□□□□ -2.03
HERC1-203ENST00000558532 EPOPA6NHQ4 379 aa2.37□□□□□ -2.03
HERC1-203ENST00000558532 C9JAW5 83 aa2.37□□□□□ -2.03
HERC1-203ENST00000558532 NXPH4O95158 308 aa2.37□□□□□ -2.03
HERC1-203ENST00000558532 NDUFA3O95167 84 aa2.37□□□□□ -2.03
HERC1-203ENST00000558532 IGHV4-31P0DP07 118 aa2.37□□□□□ -2.03
HERC1-203ENST00000558532 GATA1P15976 413 aaPredicted RBP2.37□□□□□ -2.03
HERC1-203ENST00000558532 GLRXP35754 106 aa2.37□□□□□ -2.03
HERC1-203ENST00000558532 EFNA4P52798 201 aa2.37□□□□□ -2.03
HERC1-203ENST00000558532 ATP5J2P56134 94 aa2.37□□□□□ -2.03
HERC1-203ENST00000558532 TSPEAR-AS2P59090 65 aa2.37□□□□□ -2.03
HERC1-203ENST00000558532 HERVK_113P61574 105 aa2.37□□□□□ -2.03
HERC1-203ENST00000558532 ATXN8Q156A1 80 aa2.37□□□□□ -2.03
HERC1-203ENST00000558532 C3orf22Q8N5N4 141 aa2.37□□□□□ -2.03
HERC1-203ENST00000558532 MRPL53Q96EL3 112 aaKnown RBP2.37□□□□□ -2.03
HERC1-203ENST00000558532 TMEM101Q96IK0 257 aa2.37□□□□□ -2.03
HERC1-203ENST00000558532 TIMM17AQ99595 171 aa2.37□□□□□ -2.03
HERC1-203ENST00000558532 RNF5Q99942 180 aa2.37□□□□□ -2.03
HERC1-203ENST00000558532 SPRR3Q9UBC9 169 aa2.37□□□□□ -2.03
HERC1-203ENST00000558532 CTSZQ9UBR2 303 aa2.37□□□□□ -2.03
HERC1-203ENST00000558532 LENEPQ9Y5L5 61 aa2.37□□□□□ -2.03
HERC1-203ENST00000558532 BRCA2P51587 3418 aa2.37□□□□□ -2.03
HERC1-203ENST00000558532 CNTRLQ7Z7A1 2325 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 IGKV2-40A0A087WW87 121 aaPredicted RBP2.36□□□□□ -2.03
HERC1-203ENST00000558532 TMSB15BA0A087X1C1 80 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 TRAV17A0A0B4J275 112 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 TEX49A0A1B0GTD5 131 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 TMEM223A0PJW6 202 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 IGIPA6NJ69 53 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 H7C423 109 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 K7ENP7 123 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 LST1O00453 97 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 NPFFO15130 113 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 LYZL6O75951 148 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 PPP1R17O96001 155 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 IGKV2D-40P01614 121 aaPredicted RBP2.36□□□□□ -2.03
HERC1-203ENST00000558532 IGHV1-69P01742 117 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 IGHV3-48P01763 117 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 TRGV3P03979 118 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 COX7CP15954 63 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 RPL7P18124 248 aaKnown RBP2.36□□□□□ -2.03
HERC1-203ENST00000558532 TMEM258P61165 79 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 HERVK_113P63121 156 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 ZNF415Q09FC8 603 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 SRSF9Q13242 221 aaKnown RBP eCLIP2.36□□□□□ -2.03
HERC1-203ENST00000558532 TMEM155Q4W5P6 130 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 HES3Q5TGS1 186 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 SPINK14Q6IE38 97 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 DUX4L9Q6RFH8 374 aaPredicted RBP2.36□□□□□ -2.03
HERC1-203ENST00000558532 C2orf66Q6UXQ4 117 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 SCGB1D4Q6XE38 83 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 FAM19A5Q7Z5A7 132 aaPredicted RBP2.36□□□□□ -2.03
HERC1-203ENST00000558532 C5orf38Q86SI9 138 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 APRG1Q8IVJ8 170 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 FAM216BQ8N7L0 139 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 TMEM141Q96I45 108 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 C2orf48Q96LS8 159 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 METTL26Q96S19 204 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 HES7Q9BYE0 225 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 ZNRD1Q9P1U0 126 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 KAAG1Q9UBP8 84 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 SLC25A15Q9Y619 301 aa2.36□□□□□ -2.03
HERC1-203ENST00000558532 IGLV11-55A0A075B6I3 123 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 TRGV5A0A0B4J1U4 118 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 IGHV1-3A0A0C4DH29 117 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 A0A0J9YWU9 116 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 TRBV6-5A0A0K0K1A5 114 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 FAM236AA0A1B0GUQ0 79 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 FAM236BA0A1B0GV22 79 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 EPM2AB3EWF7 344 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 J3QQQ9 107 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 OVOL1O14753 267 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 LEPROTO15243 131 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 NBR2O15453 112 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 IGLV1-47P01700 117 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 LINC00694P0DN24 101 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 CCL4P13236 92 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 PMVKQ15126 192 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 C9orf153Q5TBE3 101 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 FAM222AQ5U5X8 452 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 HCP5Q6MZN7 132 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 LINC00643Q86TS7 51 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 DYNAPQ8N1N2 210 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 DEFB119Q8N690 84 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 DAND5Q8N907 189 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 OR13C6PQ8NH95 151 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 Q8TAT8 98 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 MRAPQ8TCY5 172 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 DCANP1Q8TF63 244 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms