RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 ODAMA1E959 279 aa2.67□□□□□ -1.98
LRRC28-205ENST00000558248 A8MWP4 228 aa2.67□□□□□ -1.98
LRRC28-205ENST00000558248 H3BMM0 161 aa2.67□□□□□ -1.98
LRRC28-205ENST00000558248 LY6LH3BQJ8 138 aa2.67□□□□□ -1.98
LRRC28-205ENST00000558248 TMEM256-PLSCR3K7ERE1 68 aa2.67□□□□□ -1.98
LRRC28-205ENST00000558248 PGLYRP1O75594 196 aaPredicted RBP2.67□□□□□ -1.98
LRRC28-205ENST00000558248 LHBP01229 141 aa2.67□□□□□ -1.98
LRRC28-205ENST00000558248 IGKV3-15P01624 115 aa2.67□□□□□ -1.98
LRRC28-205ENST00000558248 TRGV3P03979 118 aa2.67□□□□□ -1.98
LRRC28-205ENST00000558248 HLA-DMBP28068 263 aa2.67□□□□□ -1.98
LRRC28-205ENST00000558248 RPL35P42766 123 aaKnown RBP2.67□□□□□ -1.98
LRRC28-205ENST00000558248 DYNLT3P51808 116 aa2.67□□□□□ -1.98
LRRC28-205ENST00000558248 GNB2P62879 340 aa2.67□□□□□ -1.98
LRRC28-205ENST00000558248 ZNF141Q15928 474 aa2.67□□□□□ -1.98
LRRC28-205ENST00000558248 ZNF181Q2M3W8 571 aa2.67□□□□□ -1.98
LRRC28-205ENST00000558248 EIF5AL1Q6IS14 154 aaKnown RBP2.67□□□□□ -1.98
LRRC28-205ENST00000558248 HIST3H2BBQ8N257 126 aa2.67□□□□□ -1.98
LRRC28-205ENST00000558248 C3orf22Q8N5N4 141 aa2.67□□□□□ -1.98
LRRC28-205ENST00000558248 DEFB108BQ8NET1 73 aa2.67□□□□□ -1.98
LRRC28-205ENST00000558248 OR5A2Q8NGI9 324 aa2.67□□□□□ -1.98
LRRC28-205ENST00000558248 POP5Q969H6 163 aaKnown RBP2.67□□□□□ -1.98
LRRC28-205ENST00000558248 UBE2WQ96B02 151 aa2.67□□□□□ -1.98
LRRC28-205ENST00000558248 TMEM191AQ9H0A3 160 aa2.67□□□□□ -1.98
LRRC28-205ENST00000558248 CST9LQ9H4G1 147 aa2.67□□□□□ -1.98
LRRC28-205ENST00000558248 RERGLQ9H628 205 aa2.67□□□□□ -1.98
LRRC28-205ENST00000558248 MARCOQ9UEW3 520 aaPredicted RBP2.67□□□□□ -1.98
LRRC28-205ENST00000558248 IGHV3-15A0A0B4J1V0 119 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 IGHV3-73A0A0B4J1V6 119 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 TRBV27A0A0K0K1C4 114 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 OR2T8A6NH00 312 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 A8MU10 97 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 A8MWV9 139 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 CDC42EP2O14613 210 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 LECT2O14960 151 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 NPYP01303 97 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 IFNA17P01571 189 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 IGKV1D-33P01593 117 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 IGKV1-33P01594 117 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 CXCL1P09341 107 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 AKAIN1P0CW23 69 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 ZNF728P0DKX0 622 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 CRHBPP24387 322 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 QRFPP83859 136 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 MIAQ16674 131 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 DEFB112Q30KQ8 113 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 TEX261Q6UWH6 196 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 GLIPR1L1Q6UWM5 242 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 Q6ZR03 302 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 MIR17HGQ75NE6 70 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 C11orf42Q8N5U0 333 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 BPIFB6Q8NFQ5 453 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 OR5D16Q8NGK9 328 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 BRK1Q8WUW1 75 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 ZC2HC1AQ96GY0 325 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 SCGB3A1Q96QR1 104 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 HIST1H2BLQ99880 126 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 SPANXDQ9BXN6 97 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 SMDT1Q9H4I9 107 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 DYNLRB1Q9NP97 96 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 CCDC167Q9P0B6 97 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 OR5V1Q9UGF6 321 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 ICOSQ9Y6W8 199 aa2.66□□□□□ -1.98
LRRC28-205ENST00000558248 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.65□□□□□ -1.99
LRRC28-205ENST00000558248 TRBV6-6A0A0A6YYG2 114 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 IGHV1-18A0A0C4DH31 117 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 IFITM5A6NNB3 132 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 BBIP1A8MTZ0 92 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 A8MWP6 167 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 M0R143 59 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 HIST1H2BKO60814 126 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 TCL1BO95988 128 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 IGHV3-7P01780 117 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 HIST1H2BJP06899 126 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 DNAH10OSP0CZ25 163 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 SSR2P43308 183 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 FOXA3P55318 350 aaPredicted RBP2.65□□□□□ -1.99
LRRC28-205ENST00000558248 PKIAP61925 76 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 LSM3P62310 102 aaKnown RBP2.65□□□□□ -1.99
LRRC28-205ENST00000558248 HES1Q14469 280 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 ADM2Q7Z4H4 148 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.65□□□□□ -1.99
LRRC28-205ENST00000558248 OR10AC1Q8NH08 325 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 SMCR5Q8TEV8 140 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 DEDD2Q8WXF8 326 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 PP6455Q8WZ26 134 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 ZNF714Q96N38 554 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 OR4C12Q96R67 309 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 UPK3BQ9BT76 320 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 NPCDR1Q9BY65 106 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 LINC00574Q9H8X3 128 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 EPDR1Q9UM22 224 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 AGRNO00468 2067 aa2.65□□□□□ -1.99
LRRC28-205ENST00000558248 A0A096LNJ9 63 aa2.64□□□□□ -1.99
LRRC28-205ENST00000558248 IGLV3-32A0A0A0MS00 114 aa2.64□□□□□ -1.99
LRRC28-205ENST00000558248 TMEM218A2RU14 115 aa2.64□□□□□ -1.99
LRRC28-205ENST00000558248 ZNF727A8MUV8 499 aa2.64□□□□□ -1.99
LRRC28-205ENST00000558248 ZNF670-ZNF695F2Z2N8 137 aa2.64□□□□□ -1.99
LRRC28-205ENST00000558248 CREBL2O60519 120 aaPredicted RBP2.64□□□□□ -1.99
LRRC28-205ENST00000558248 CD24P25063 80 aa2.64□□□□□ -1.99
LRRC28-205ENST00000558248 GNG4P50150 75 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms