RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 RBM38Q9H0Z9 239 aaKnown RBP3.36□□□□□ -1.87
SPG11-208ENST00000558155 DAZ3Q9NR90 486 aaKnown RBP3.36□□□□□ -1.87
SPG11-208ENST00000558155 LRP1Q07954 4544 aaKnown RBP3.35□□□□□ -1.87
SPG11-208ENST00000558155 HMCN2Q8NDA2 5059 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 IGHV3-73A0A0B4J1V6 119 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 TRAV21A0A0B4J279 112 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 C7orf66A4D0T2 115 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 DIRC3C9JPN6 131 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 H3BS24 57 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 MGST1P10620 155 aaKnown RBP3.35□□□□□ -1.87
SPG11-208ENST00000558155 S100A11P31949 105 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 INPP1P49441 399 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 FGF8P55075 233 aaPredicted RBP3.35□□□□□ -1.87
SPG11-208ENST00000558155 DEFA1P59665 94 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 DEFA3P59666 94 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 RAB5BP61020 215 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 PKIAP61925 76 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 RPL19P84098 196 aaKnown RBP3.35□□□□□ -1.87
SPG11-208ENST00000558155 Q0VG73 95 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 IAH1Q2TAA2 248 aaPredicted RBP3.35□□□□□ -1.87
SPG11-208ENST00000558155 ZNF876PQ49A33 203 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 CFAP126Q5VTH2 177 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 DGAT2L7PQ6IED9 249 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 KCNIP4Q6PIL6 250 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 OR10G9Q8NGN4 311 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 Q8TAT8 98 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 DPH3Q96FX2 82 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 C14orf144Q96I85 54 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 KCNS1Q96KK3 526 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 SDF2L1Q9HCN8 221 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 UQCC1Q9NVA1 299 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 KLK12Q9UKR0 248 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 WDR83OSQ9Y284 106 aa3.35□□□□□ -1.87
SPG11-208ENST00000558155 GAGE12JA6NER3 117 aa3.34□□□□□ -1.87
SPG11-208ENST00000558155 SMLR1H3BR10 107 aa3.34□□□□□ -1.87
SPG11-208ENST00000558155 EIF3GO75821 320 aaKnown RBP eCLIP3.34□□□□□ -1.87
SPG11-208ENST00000558155 CST7O76096 145 aa3.34□□□□□ -1.87
SPG11-208ENST00000558155 GAS8-AS1O95177 125 aa3.34□□□□□ -1.87
SPG11-208ENST00000558155 MBPP02686 304 aaPredicted RBP3.34□□□□□ -1.87
SPG11-208ENST00000558155 TYMSP04818 313 aa3.34□□□□□ -1.87
SPG11-208ENST00000558155 IL7P13232 177 aa3.34□□□□□ -1.87
SPG11-208ENST00000558155 ZNF25P17030 456 aaPredicted RBP3.34□□□□□ -1.87
SPG11-208ENST00000558155 DDTP30046 118 aa3.34□□□□□ -1.87
SPG11-208ENST00000558155 CAV2P51636 162 aa3.34□□□□□ -1.87
SPG11-208ENST00000558155 RANP62826 216 aaKnown RBP3.34□□□□□ -1.87
SPG11-208ENST00000558155 BAXQ07812 192 aa3.34□□□□□ -1.87
SPG11-208ENST00000558155 GAGE4Q13068 117 aa3.34□□□□□ -1.87
SPG11-208ENST00000558155 GAGE5Q13069 117 aa3.34□□□□□ -1.87
SPG11-208ENST00000558155 ATP6V1FQ16864 119 aa3.34□□□□□ -1.87
SPG11-208ENST00000558155 GAGE13Q4V321 117 aa3.34□□□□□ -1.87
SPG11-208ENST00000558155 PYDC2Q56P42 97 aa3.34□□□□□ -1.87
SPG11-208ENST00000558155 COMMD7Q86VX2 200 aa3.34□□□□□ -1.87
SPG11-208ENST00000558155 CYB561D1Q8N8Q1 229 aa3.34□□□□□ -1.87
SPG11-208ENST00000558155 TMED6Q8WW62 240 aa3.34□□□□□ -1.87
SPG11-208ENST00000558155 ASB13Q8WXK3 278 aa3.34□□□□□ -1.87
SPG11-208ENST00000558155 UBE2WQ96B02 151 aa3.34□□□□□ -1.87
SPG11-208ENST00000558155 ZC2HC1AQ96GY0 325 aa3.34□□□□□ -1.87
SPG11-208ENST00000558155 SLC25A2Q9BXI2 301 aa3.34□□□□□ -1.87
SPG11-208ENST00000558155 DNAH8Q96JB1 4490 aa3.33□□□□□ -1.88
SPG11-208ENST00000558155 A0A087WX48 190 aa3.33□□□□□ -1.88
SPG11-208ENST00000558155 PGPA6NDG6 321 aa3.33□□□□□ -1.88
SPG11-208ENST00000558155 FAM24AA6NFZ4 105 aa3.33□□□□□ -1.88
SPG11-208ENST00000558155 IFNA7P01567 189 aa3.33□□□□□ -1.88
SPG11-208ENST00000558155 PVALBP20472 110 aaPredicted RBP3.33□□□□□ -1.88
SPG11-208ENST00000558155 FGF7P21781 194 aa3.33□□□□□ -1.88
SPG11-208ENST00000558155 RAB5CP51148 216 aa3.33□□□□□ -1.88
SPG11-208ENST00000558155 HBG1P69891 147 aa3.33□□□□□ -1.88
SPG11-208ENST00000558155 HBG2P69892 147 aa3.33□□□□□ -1.88
SPG11-208ENST00000558155 ATRAIDQ6UW56 229 aa3.33□□□□□ -1.88
SPG11-208ENST00000558155 DPPA3Q6W0C5 159 aa3.33□□□□□ -1.88
SPG11-208ENST00000558155 NIT1Q86X76 327 aa3.33□□□□□ -1.88
SPG11-208ENST00000558155 C9orf163Q8N9P6 203 aa3.33□□□□□ -1.88
SPG11-208ENST00000558155 CMTM2Q8TAZ6 248 aa3.33□□□□□ -1.88
SPG11-208ENST00000558155 PTH2Q96A98 100 aa3.33□□□□□ -1.88
SPG11-208ENST00000558155 FAM167A-AS1Q96KT0 104 aa3.33□□□□□ -1.88
SPG11-208ENST00000558155 LINC01600Q96MT4 127 aa3.33□□□□□ -1.88
SPG11-208ENST00000558155 CHCHD7Q9BUK0 85 aa3.33□□□□□ -1.88
SPG11-208ENST00000558155 C1orf43Q9BWL3 253 aa3.33□□□□□ -1.88
SPG11-208ENST00000558155 NMES1Q9C002 83 aa3.33□□□□□ -1.88
SPG11-208ENST00000558155 LSM5Q9Y4Y9 91 aaKnown RBP3.33□□□□□ -1.88
SPG11-208ENST00000558155 UBE2L5PA0A1B0GUS4 154 aa3.32□□□□□ -1.88
SPG11-208ENST00000558155 NAP1L6A6NFF2 107 aa3.32□□□□□ -1.88
SPG11-208ENST00000558155 A8MWV9 139 aa3.32□□□□□ -1.88
SPG11-208ENST00000558155 TMEM262E9PQX1 116 aa3.32□□□□□ -1.88
SPG11-208ENST00000558155 TAAR5O14804 337 aa3.32□□□□□ -1.88
SPG11-208ENST00000558155 SCO1O75880 301 aa3.32□□□□□ -1.88
SPG11-208ENST00000558155 SULT1A1P50225 295 aa3.32□□□□□ -1.88
SPG11-208ENST00000558155 GCSAMLQ5JQS6 135 aa3.32□□□□□ -1.88
SPG11-208ENST00000558155 CLLU1Q5K131 121 aa3.32□□□□□ -1.88
SPG11-208ENST00000558155 FAM74A1Q5RGS3 127 aa3.32□□□□□ -1.88
SPG11-208ENST00000558155 ZFP2Q6ZN57 461 aa3.32□□□□□ -1.88
SPG11-208ENST00000558155 MIR17HGQ75NE6 70 aa3.32□□□□□ -1.88
SPG11-208ENST00000558155 OR2T35Q8NGX2 323 aa3.32□□□□□ -1.88
SPG11-208ENST00000558155 FXYD5Q96DB9 178 aa3.32□□□□□ -1.88
SPG11-208ENST00000558155 PHYHIPLQ96FC7 376 aa3.32□□□□□ -1.88
SPG11-208ENST00000558155 SFRP2Q96HF1 295 aa3.32□□□□□ -1.88
SPG11-208ENST00000558155 DNAJC30Q96LL9 226 aa3.32□□□□□ -1.88
SPG11-208ENST00000558155 HYLS1Q96M11 299 aa3.32□□□□□ -1.88
SPG11-208ENST00000558155 SPANXA1Q9NS26 97 aa3.32□□□□□ -1.88
SPG11-208ENST00000558155 LYRM2Q9NU23 88 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms