RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 SPART-AS1P0CW21 52 aa12.06□□□□□ -0.48
SNX1-203ENST00000558040 FAM222AQ5U5X8 452 aa12.06□□□□□ -0.48
SNX1-203ENST00000558040 FAM104BQ5XKR9 115 aa12.06□□□□□ -0.48
SNX1-203ENST00000558040 A0A087WWL8 130 aa12.05□□□□□ -0.48
SNX1-203ENST00000558040 RS1O15537 224 aa12.05□□□□□ -0.48
SNX1-203ENST00000558040 FABP9Q0Z7S8 132 aa12.05□□□□□ -0.48
SNX1-203ENST00000558040 FAM74A4Q5TZK3 123 aa12.05□□□□□ -0.48
SNX1-203ENST00000558040 AMN1Q8IY45 258 aa12.05□□□□□ -0.48
SNX1-203ENST00000558040 LINC00612Q8N6U2 182 aa12.05□□□□□ -0.48
SNX1-203ENST00000558040 JPT2Q9H910 190 aa12.05□□□□□ -0.48
SNX1-203ENST00000558040 DKK2Q9UBU2 259 aa12.05□□□□□ -0.48
SNX1-203ENST00000558040 NBEAL1Q6ZS30 2694 aa12.05□□□□□ -0.48
SNX1-203ENST00000558040 TRAV4A0A0B4J268 109 aa12.04□□□□□ -0.48
SNX1-203ENST00000558040 CIDEAO60543 219 aa12.04□□□□□ -0.48
SNX1-203ENST00000558040 MGPP08493 103 aa12.04□□□□□ -0.48
SNX1-203ENST00000558040 SLAQ13239 276 aa12.04□□□□□ -0.48
SNX1-203ENST00000558040 CFAP126Q5VTH2 177 aa12.04□□□□□ -0.48
SNX1-203ENST00000558040 OR4C5Q8NGB2 326 aa12.04□□□□□ -0.48
SNX1-203ENST00000558040 KIF25-AS1Q9Y6Z4 181 aa12.04□□□□□ -0.48
SNX1-203ENST00000558040 TRGC2P03986 189 aa12.03□□□□□ -0.48
SNX1-203ENST00000558040 CRYGDP07320 174 aa12.03□□□□□ -0.48
SNX1-203ENST00000558040 DEFB130BP0DP73 79 aa12.03□□□□□ -0.48
SNX1-203ENST00000558040 DEFB130AP0DP74 79 aa12.03□□□□□ -0.48
SNX1-203ENST00000558040 RAB4AP20338 218 aa12.03□□□□□ -0.48
SNX1-203ENST00000558040 ZFP2Q6ZN57 461 aa12.03□□□□□ -0.48
SNX1-203ENST00000558040 C18orf15Q96N68 181 aa12.03□□□□□ -0.48
SNX1-203ENST00000558040 SAMD10Q9BYL1 202 aa12.03□□□□□ -0.48
SNX1-203ENST00000558040 NHLRC4P0CG21 123 aaPredicted RBP12.02□□□□□ -0.49
SNX1-203ENST00000558040 DAD1P61803 113 aa12.02□□□□□ -0.49
SNX1-203ENST00000558040 ZNF56Q15929 161 aa12.02□□□□□ -0.49
SNX1-203ENST00000558040 MRAP2Q96G30 205 aa12.02□□□□□ -0.49
SNX1-203ENST00000558040 RNF185Q96GF1 192 aa12.02□□□□□ -0.49
SNX1-203ENST00000558040 F5H697 171 aa12.01□□□□□ -0.49
SNX1-203ENST00000558040 PPBPP02775 128 aa12.01□□□□□ -0.49
SNX1-203ENST00000558040 MRPL51Q4U2R6 128 aaKnown RBP12.01□□□□□ -0.49
SNX1-203ENST00000558040 POM121L12Q8N7R1 296 aa12.01□□□□□ -0.49
SNX1-203ENST00000558040 A0A0J9YWU9 116 aa12□□□□□ -0.49
SNX1-203ENST00000558040 C1orf196B1AJZ1 125 aa12□□□□□ -0.49
SNX1-203ENST00000558040 CKS2P33552 79 aa12□□□□□ -0.49
SNX1-203ENST00000558040 LINC00315P59091 139 aa12□□□□□ -0.49
SNX1-203ENST00000558040 UFSP1Q6NVU6 142 aa12□□□□□ -0.49
SNX1-203ENST00000558040 ORMDL3Q8N138 153 aa12□□□□□ -0.49
SNX1-203ENST00000558040 CELA1Q9UNI1 258 aa12□□□□□ -0.49
SNX1-203ENST00000558040 IGHV3-73A0A0B4J1V6 119 aa11.99□□□□□ -0.49
SNX1-203ENST00000558040 KIAA1644Q3SXP7 199 aa11.99□□□□□ -0.49
SNX1-203ENST00000558040 ZNF479Q96JC4 524 aa11.99□□□□□ -0.49
SNX1-203ENST00000558040 D6R8Y8 96 aa11.98□□□□□ -0.49
SNX1-203ENST00000558040 H7C1H1 209 aa11.98□□□□□ -0.49
SNX1-203ENST00000558040 IGHV3-53P01767 116 aa11.98□□□□□ -0.49
SNX1-203ENST00000558040 U3KQK5 164 aa11.98□□□□□ -0.49
SNX1-203ENST00000558040 TRGV4A0A0C4DH28 118 aa11.97□□□□□ -0.49
SNX1-203ENST00000558040 PHOX2AO14813 284 aa11.97□□□□□ -0.49
SNX1-203ENST00000558040 PPP1R17O96001 155 aa11.97□□□□□ -0.49
SNX1-203ENST00000558040 SRIP30626 198 aa11.97□□□□□ -0.49
SNX1-203ENST00000558040 RAB5BP61020 215 aa11.97□□□□□ -0.49
SNX1-203ENST00000558040 SUMO4Q6EEV6 95 aa11.97□□□□□ -0.49
SNX1-203ENST00000558040 PRELID3AQ96N28 172 aa11.97□□□□□ -0.49
SNX1-203ENST00000558040 LAMTOR2Q9Y2Q5 125 aa11.97□□□□□ -0.49
SNX1-203ENST00000558040 TRAV26-2A0A0B4J265 109 aa11.96□□□□□ -0.49
SNX1-203ENST00000558040 NCR2O95944 276 aa11.96□□□□□ -0.49
SNX1-203ENST00000558040 ATP5G1P05496 136 aa11.96□□□□□ -0.49
SNX1-203ENST00000558040 ALKBH7Q9BT30 221 aaPredicted RBP11.96□□□□□ -0.49
SNX1-203ENST00000558040 EDA2RQ9HAV5 297 aa11.96□□□□□ -0.49
SNX1-203ENST00000558040 SMKR1H3BMG3 65 aa11.95□□□□□ -0.5
SNX1-203ENST00000558040 C11orf45Q8TAV5 145 aa11.95□□□□□ -0.5
SNX1-203ENST00000558040 M0QY20 66 aa11.94□□□□□ -0.5
SNX1-203ENST00000558040 GATA1P15976 413 aaPredicted RBP11.94□□□□□ -0.5
SNX1-203ENST00000558040 C12orf74Q32Q52 190 aa11.94□□□□□ -0.5
SNX1-203ENST00000558040 FHL2Q14192 279 aa11.93□□□□□ -0.5
SNX1-203ENST00000558040 OR10J3Q5JRS4 329 aa11.93□□□□□ -0.5
SNX1-203ENST00000558040 NACAE9PAV3 2078 aa11.93□□□□□ -0.5
SNX1-203ENST00000558040 TRBV6-4A0A1B0GX49 114 aa11.92□□□□□ -0.5
SNX1-203ENST00000558040 K7EQD1 137 aa11.92□□□□□ -0.5
SNX1-203ENST00000558040 HIST1H2BKO60814 126 aa11.92□□□□□ -0.5
SNX1-203ENST00000558040 TNFRSF6BO95407 300 aa11.92□□□□□ -0.5
SNX1-203ENST00000558040 NPYP01303 97 aa11.92□□□□□ -0.5
SNX1-203ENST00000558040 HIST1H2BJP06899 126 aa11.92□□□□□ -0.5
SNX1-203ENST00000558040 HIST1H2BOP23527 126 aa11.92□□□□□ -0.5
SNX1-203ENST00000558040 HIST1H2BBP33778 126 aa11.92□□□□□ -0.5
SNX1-203ENST00000558040 HIST1H2BDP58876 126 aa11.92□□□□□ -0.5
SNX1-203ENST00000558040 HIST1H2BCP62807 126 aa11.92□□□□□ -0.5
SNX1-203ENST00000558040 HIST2H2BEQ16778 126 aa11.92□□□□□ -0.5
SNX1-203ENST00000558040 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.92□□□□□ -0.5
SNX1-203ENST00000558040 Q6ZSN1 163 aa11.92□□□□□ -0.5
SNX1-203ENST00000558040 NRACQ8N912 160 aa11.92□□□□□ -0.5
SNX1-203ENST00000558040 HIST1H2BHQ93079 126 aa11.92□□□□□ -0.5
SNX1-203ENST00000558040 HIST1H2BNQ99877 126 aa11.92□□□□□ -0.5
SNX1-203ENST00000558040 HIST1H2BMQ99879 126 aa11.92□□□□□ -0.5
SNX1-203ENST00000558040 NIT2Q9NQR4 276 aa11.92□□□□□ -0.5
SNX1-203ENST00000558040 TRBV10-1A0A0K0K1A3 114 aa11.91□□□□□ -0.5
SNX1-203ENST00000558040 GAS8-AS1O95177 125 aa11.91□□□□□ -0.5
SNX1-203ENST00000558040 RHOHQ15669 191 aa11.91□□□□□ -0.5
SNX1-203ENST00000558040 RPL39LQ96EH5 51 aaKnown RBP11.91□□□□□ -0.5
SNX1-203ENST00000558040 DNAJC30Q96LL9 226 aa11.91□□□□□ -0.5
SNX1-203ENST00000558040 C20orf78Q9BR46 151 aa11.91□□□□□ -0.5
SNX1-203ENST00000558040 PRADC1Q9BSG0 188 aa11.91□□□□□ -0.5
SNX1-203ENST00000558040 MAP1LC3AQ9H492 121 aa11.91□□□□□ -0.5
SNX1-203ENST00000558040 HHLA3Q9XRX5 114 aa11.91□□□□□ -0.5
SNX1-203ENST00000558040 NBEAL2Q6ZNJ1 2754 aa11.91□□□□□ -0.5
SNX1-203ENST00000558040 F5H768 121 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 311.5 ms