RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 MAP2P11137 1827 aaKnown RBP1.81□□□□□ -2.12
TDP1-217ENST00000557782 PTPRDP23468 1912 aa1.81□□□□□ -2.12
TDP1-217ENST00000557782 TCHHQ07283 1943 aa1.81□□□□□ -2.12
TDP1-217ENST00000557782 TNRC6AQ8NDV7 1962 aaKnown RBP1.81□□□□□ -2.12
TDP1-217ENST00000557782 MYO18AQ92614 2054 aaKnown RBP1.81□□□□□ -2.12
TDP1-217ENST00000557782 LMTK2Q8IWU2 1503 aa1.81□□□□□ -2.12
TDP1-217ENST00000557782 LRRC7Q96NW7 1537 aa1.81□□□□□ -2.12
TDP1-217ENST00000557782 COL5A3P25940 1745 aaPredicted RBP1.8□□□□□ -2.12
TDP1-217ENST00000557782 RICTORQ6R327 1708 aa1.8□□□□□ -2.12
TDP1-217ENST00000557782 ALPK3Q96L96 1907 aa1.8□□□□□ -2.12
TDP1-217ENST00000557782 NUPR1O60356 82 aa1.8□□□□□ -2.12
TDP1-217ENST00000557782 PITX3O75364 302 aa1.8□□□□□ -2.12
TDP1-217ENST00000557782 HIST1H1DP16402 221 aaKnown RBP1.8□□□□□ -2.12
TDP1-217ENST00000557782 RBP2P50120 134 aa1.8□□□□□ -2.12
TDP1-217ENST00000557782 RHOHQ15669 191 aa1.8□□□□□ -2.12
TDP1-217ENST00000557782 C14orf144Q96I85 54 aa1.8□□□□□ -2.12
TDP1-217ENST00000557782 PPP3R2Q96LZ3 170 aa1.8□□□□□ -2.12
TDP1-217ENST00000557782 SEC11CQ9BY50 192 aa1.8□□□□□ -2.12
TDP1-217ENST00000557782 ZFP30Q9Y2G7 519 aa1.8□□□□□ -2.12
TDP1-217ENST00000557782 SNURFQ9Y675 71 aa1.8□□□□□ -2.12
TDP1-217ENST00000557782 FANCAO15360 1455 aa1.8□□□□□ -2.12
TDP1-217ENST00000557782 MED14O60244 1454 aa1.8□□□□□ -2.12
TDP1-217ENST00000557782 NEXMIFQ5QGS0 1516 aa1.8□□□□□ -2.12
TDP1-217ENST00000557782 LRRC37A3O60309 1634 aa1.8□□□□□ -2.12
TDP1-217ENST00000557782 TOPAZ1Q8N9V7 1692 aa1.8□□□□□ -2.12
TDP1-217ENST00000557782 CRYBG1Q9Y4K1 1723 aa1.8□□□□□ -2.12
TDP1-217ENST00000557782 EXPH5Q8NEV8 1989 aa1.79□□□□□ -2.12
TDP1-217ENST00000557782 CCDC179H3BU77 68 aa1.79□□□□□ -2.12
TDP1-217ENST00000557782 SMIM6P0DI80 62 aa1.79□□□□□ -2.12
TDP1-217ENST00000557782 PIPP12273 146 aaPredicted RBP1.79□□□□□ -2.12
TDP1-217ENST00000557782 POLR2JP52435 117 aaKnown RBP1.79□□□□□ -2.12
TDP1-217ENST00000557782 TPPP2P59282 170 aa1.79□□□□□ -2.12
TDP1-217ENST00000557782 PPP3R1P63098 170 aa1.79□□□□□ -2.12
TDP1-217ENST00000557782 MPV17LQ2QL34 196 aa1.79□□□□□ -2.12
TDP1-217ENST00000557782 Q56UQ5 140 aa1.79□□□□□ -2.12
TDP1-217ENST00000557782 LINC00299Q6ZSB3 139 aa1.79□□□□□ -2.12
TDP1-217ENST00000557782 PPDPFLQ8WWR9 84 aa1.79□□□□□ -2.12
TDP1-217ENST00000557782 SPTSSAQ969W0 71 aa1.79□□□□□ -2.12
TDP1-217ENST00000557782 MED9Q9NWA0 146 aa1.79□□□□□ -2.12
TDP1-217ENST00000557782 DIP2CQ9Y2E4 1556 aa1.79□□□□□ -2.12
TDP1-217ENST00000557782 TMEM131LA2VDJ0 1609 aa1.79□□□□□ -2.12
TDP1-217ENST00000557782 C3P01024 1663 aa1.79□□□□□ -2.12
TDP1-217ENST00000557782 RGPD1P0DJD0 1748 aa1.79□□□□□ -2.12
TDP1-217ENST00000557782 XRN1Q8IZH2 1706 aaKnown RBP1.79□□□□□ -2.12
TDP1-217ENST00000557782 UNC13CQ8NB66 2214 aa1.78□□□□□ -2.12
TDP1-217ENST00000557782 INTS1Q8N201 2190 aaKnown RBP1.78□□□□□ -2.12
TDP1-217ENST00000557782 CR1P17927 2039 aa1.78□□□□□ -2.12
TDP1-217ENST00000557782 PLXNA2O75051 1894 aa1.78□□□□□ -2.12
TDP1-217ENST00000557782 MARF1Q9Y4F3 1742 aaKnown RBP1.78□□□□□ -2.12
TDP1-217ENST00000557782 NRXN3Q9Y4C0 1643 aa1.78□□□□□ -2.12
TDP1-217ENST00000557782 ABCC3O15438 1527 aa1.78□□□□□ -2.12
TDP1-217ENST00000557782 CD163L1Q9NR16 1453 aa1.78□□□□□ -2.12
TDP1-217ENST00000557782 NSD3Q9BZ95 1437 aa1.78□□□□□ -2.12
TDP1-217ENST00000557782 SPAARA0A1B0GVQ0 90 aa1.78□□□□□ -2.12
TDP1-217ENST00000557782 TMEM30CPA0ZSE6 113 aa1.78□□□□□ -2.12
TDP1-217ENST00000557782 MRPS14O60783 128 aaKnown RBP1.78□□□□□ -2.12
TDP1-217ENST00000557782 NDUFB6O95139 128 aa1.78□□□□□ -2.12
TDP1-217ENST00000557782 IL5P05113 134 aa1.78□□□□□ -2.12
TDP1-217ENST00000557782 SPANXN1Q5VSR9 72 aa1.78□□□□□ -2.12
TDP1-217ENST00000557782 UNQ5815/PRO19632Q6UWF5 114 aa1.78□□□□□ -2.12
TDP1-217ENST00000557782 TMEM242Q9NWH2 141 aa1.78□□□□□ -2.12
TDP1-217ENST00000557782 SERP1Q9Y6X1 66 aa1.78□□□□□ -2.12
TDP1-217ENST00000557782 ARFGEF3Q5TH69 2177 aa1.78□□□□□ -2.13
TDP1-217ENST00000557782 CASZ1Q86V15 1759 aa1.77□□□□□ -2.13
TDP1-217ENST00000557782 PEAK1Q9H792 1746 aa1.77□□□□□ -2.13
TDP1-217ENST00000557782 PTPRMP28827 1452 aa1.77□□□□□ -2.13
TDP1-217ENST00000557782 TRAV17A0A0B4J275 112 aa1.77□□□□□ -2.13
TDP1-217ENST00000557782 APOC4-APOC2K7ER74 178 aa1.77□□□□□ -2.13
TDP1-217ENST00000557782 SNCGO76070 127 aa1.77□□□□□ -2.13
TDP1-217ENST00000557782 TNFP01375 233 aa1.77□□□□□ -2.13
TDP1-217ENST00000557782 APOC2P02655 101 aa1.77□□□□□ -2.13
TDP1-217ENST00000557782 DEFB103AP81534 67 aa1.77□□□□□ -2.13
TDP1-217ENST00000557782 TMEM14CQ9P0S9 112 aa1.77□□□□□ -2.13
TDP1-217ENST00000557782 IER3IP1Q9Y5U9 82 aa1.77□□□□□ -2.13
TDP1-217ENST00000557782 LAMA4Q16363 1823 aa1.77□□□□□ -2.13
TDP1-217ENST00000557782 DDX60Q8IY21 1712 aaKnown RBP1.77□□□□□ -2.13
TDP1-217ENST00000557782 PPIP5K1Q6PFW1 1433 aa1.76□□□□□ -2.13
TDP1-217ENST00000557782 IGLV3-32A0A0A0MS00 114 aa1.76□□□□□ -2.13
TDP1-217ENST00000557782 A0A0J9YY99 117 aa1.76□□□□□ -2.13
TDP1-217ENST00000557782 MCRIP1C9JLW8 97 aa1.76□□□□□ -2.13
TDP1-217ENST00000557782 JMJD7-PLA2G4BH0Y9G9 81 aa1.76□□□□□ -2.13
TDP1-217ENST00000557782 KLF7O75840 302 aaPredicted RBP1.76□□□□□ -2.13
TDP1-217ENST00000557782 PIRTP0C851 137 aa1.76□□□□□ -2.13
TDP1-217ENST00000557782 IL7P13232 177 aa1.76□□□□□ -2.13
TDP1-217ENST00000557782 MRPL54Q6P161 138 aaKnown RBP1.76□□□□□ -2.13
TDP1-217ENST00000557782 GTF2H5Q6ZYL4 71 aa1.76□□□□□ -2.13
TDP1-217ENST00000557782 C15orf53Q8NAA6 179 aa1.76□□□□□ -2.13
TDP1-217ENST00000557782 RGPD8O14715 1765 aaPredicted RBP1.76□□□□□ -2.13
TDP1-217ENST00000557782 KDM3BQ7LBC6 1761 aa1.76□□□□□ -2.13
TDP1-217ENST00000557782 MCM3APO60318 1980 aa1.76□□□□□ -2.13
TDP1-217ENST00000557782 CPS1P31327 1500 aa1.76□□□□□ -2.13
TDP1-217ENST00000557782 A2ML1A8K2U0 1454 aa1.75□□□□□ -2.13
TDP1-217ENST00000557782 CDK12Q9NYV4 1490 aaPredicted RBP1.75□□□□□ -2.13
TDP1-217ENST00000557782 SIPA1L3O60292 1781 aaPredicted RBP1.75□□□□□ -2.13
TDP1-217ENST00000557782 LTN1O94822 1766 aa1.75□□□□□ -2.13
TDP1-217ENST00000557782 RGPD2P0DJD1 1756 aa1.75□□□□□ -2.13
TDP1-217ENST00000557782 ANKRD36BQ8N2N9 1353 aa1.75□□□□□ -2.13
TDP1-217ENST00000557782 PCNX2A6NKB5 2137 aa1.75□□□□□ -2.13
TDP1-217ENST00000557782 PIGBOS1A0A0B4J2F0 54 aa1.75□□□□□ -2.13
TDP1-217ENST00000557782 M0R2N4 97 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms