RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 C3orf84H3BNL1 204 aa10.72□□□□□ -0.69
NEDD1-213ENST00000557644 TWIST1Q15672 202 aa10.72□□□□□ -0.69
NEDD1-213ENST00000557644 UFSP1Q6NVU6 142 aa10.72□□□□□ -0.69
NEDD1-213ENST00000557644 C14orf178Q8N769 122 aaPredicted RBP10.72□□□□□ -0.69
NEDD1-213ENST00000557644 ANAPC16Q96DE5 110 aa10.72□□□□□ -0.69
NEDD1-213ENST00000557644 Q6ZSN1 163 aa10.71□□□□□ -0.69
NEDD1-213ENST00000557644 CLRN3Q8NCR9 226 aa10.71□□□□□ -0.69
NEDD1-213ENST00000557644 NAT8BQ9UHF3 227 aa10.71□□□□□ -0.69
NEDD1-213ENST00000557644 HHLA3Q9XRX5 114 aa10.7□□□□□ -0.7
NEDD1-213ENST00000557644 C7orf77A4D0Y5 90 aa10.7□□□□□ -0.7
NEDD1-213ENST00000557644 EVI2AP22794 236 aa10.7□□□□□ -0.7
NEDD1-213ENST00000557644 WDR73Q6P4I2 378 aa10.7□□□□□ -0.7
NEDD1-213ENST00000557644 VSIG2Q96IQ7 327 aa10.7□□□□□ -0.7
NEDD1-213ENST00000557644 FAM3BP58499 235 aaPredicted RBP10.69□□□□□ -0.7
NEDD1-213ENST00000557644 AP1S3Q96PC3 154 aa10.69□□□□□ -0.7
NEDD1-213ENST00000557644 KLK5Q9Y337 293 aaPredicted RBP10.69□□□□□ -0.7
NEDD1-213ENST00000557644 A0A1B0GUT8 65 aa10.69□□□□□ -0.7
NEDD1-213ENST00000557644 CRYBA4P53673 196 aa10.69□□□□□ -0.7
NEDD1-213ENST00000557644 KIF25-AS1Q9Y6Z4 181 aa10.69□□□□□ -0.7
NEDD1-213ENST00000557644 GATA1P15976 413 aaPredicted RBP10.68□□□□□ -0.7
NEDD1-213ENST00000557644 ZFP2Q6ZN57 461 aa10.68□□□□□ -0.7
NEDD1-213ENST00000557644 SVBPQ8N300 66 aa10.68□□□□□ -0.7
NEDD1-213ENST00000557644 PRO0255Q9UI72 69 aa10.68□□□□□ -0.7
NEDD1-213ENST00000557644 SLC25A29Q8N8R3 303 aa10.68□□□□□ -0.7
NEDD1-213ENST00000557644 BORCS7Q96B45 105 aa10.68□□□□□ -0.7
NEDD1-213ENST00000557644 RPS10P5Q9NQ39 176 aa10.68□□□□□ -0.7
NEDD1-213ENST00000557644 PAX4O43316 350 aa10.67□□□□□ -0.7
NEDD1-213ENST00000557644 LINC00315P59091 139 aa10.67□□□□□ -0.7
NEDD1-213ENST00000557644 RHEBQ15382 184 aa10.67□□□□□ -0.7
NEDD1-213ENST00000557644 Q9UF83 564 aa10.67□□□□□ -0.7
NEDD1-213ENST00000557644 LOC100131303A0A0U1RQF7 123 aa10.67□□□□□ -0.7
NEDD1-213ENST00000557644 RHODO00212 210 aa10.67□□□□□ -0.7
NEDD1-213ENST00000557644 CTDSP1Q9GZU7 261 aa10.67□□□□□ -0.7
NEDD1-213ENST00000557644 TRGC1P0CF51 173 aa10.66□□□□□ -0.7
NEDD1-213ENST00000557644 SMIM17P0DL12 118 aa10.66□□□□□ -0.7
NEDD1-213ENST00000557644 ZNF56Q15929 161 aa10.66□□□□□ -0.7
NEDD1-213ENST00000557644 MRPL54Q6P161 138 aaKnown RBP10.66□□□□□ -0.7
NEDD1-213ENST00000557644 CIDEAO60543 219 aa10.66□□□□□ -0.7
NEDD1-213ENST00000557644 SNAPINO95295 136 aa10.66□□□□□ -0.7
NEDD1-213ENST00000557644 NUDT3O95989 172 aa10.66□□□□□ -0.7
NEDD1-213ENST00000557644 MGPP08493 103 aa10.66□□□□□ -0.7
NEDD1-213ENST00000557644 ATRAIDQ6UW56 229 aa10.66□□□□□ -0.7
NEDD1-213ENST00000557644 APLNQ9ULZ1 77 aa10.66□□□□□ -0.7
NEDD1-213ENST00000557644 P0DMU3 169 aa10.65□□□□□ -0.7
NEDD1-213ENST00000557644 FAM231AP0DMU4 169 aa10.65□□□□□ -0.7
NEDD1-213ENST00000557644 FAM231CP0DMU5 169 aa10.65□□□□□ -0.7
NEDD1-213ENST00000557644 SLAQ13239 276 aa10.65□□□□□ -0.7
NEDD1-213ENST00000557644 FAM210BQ96KR6 192 aa10.65□□□□□ -0.7
NEDD1-213ENST00000557644 A0A087WWC5 75 aa10.65□□□□□ -0.71
NEDD1-213ENST00000557644 F5H697 171 aa10.65□□□□□ -0.71
NEDD1-213ENST00000557644 RIGQ13278 110 aa10.65□□□□□ -0.71
NEDD1-213ENST00000557644 DPH3P1Q9H4G8 78 aa10.65□□□□□ -0.71
NEDD1-213ENST00000557644 URGCP-MRPS24S4R325 110 aa10.65□□□□□ -0.71
NEDD1-213ENST00000557644 TRBV6-4A0A1B0GX49 114 aa10.64□□□□□ -0.71
NEDD1-213ENST00000557644 GYPEP15421 78 aa10.64□□□□□ -0.71
NEDD1-213ENST00000557644 CAMPP49913 170 aa10.64□□□□□ -0.71
NEDD1-213ENST00000557644 TMEM242Q9NWH2 141 aa10.63□□□□□ -0.71
NEDD1-213ENST00000557644 K7EQD1 137 aa10.63□□□□□ -0.71
NEDD1-213ENST00000557644 RAB4BP61018 213 aa10.63□□□□□ -0.71
NEDD1-213ENST00000557644 A0A096LPF7 62 aa10.62□□□□□ -0.71
NEDD1-213ENST00000557644 A0A1B0GXF2 115 aa10.62□□□□□ -0.71
NEDD1-213ENST00000557644 H3BNG1 76 aa10.62□□□□□ -0.71
NEDD1-213ENST00000557644 RHOHQ15669 191 aa10.62□□□□□ -0.71
NEDD1-213ENST00000557644 SMIM15Q7Z3B0 74 aa10.62□□□□□ -0.71
NEDD1-213ENST00000557644 IMMP2LQ96T52 175 aa10.62□□□□□ -0.71
NEDD1-213ENST00000557644 TRAV26-2A0A0B4J265 109 aa10.62□□□□□ -0.71
NEDD1-213ENST00000557644 SUMO4Q6EEV6 95 aa10.62□□□□□ -0.71
NEDD1-213ENST00000557644 C15orf53Q8NAA6 179 aa10.62□□□□□ -0.71
NEDD1-213ENST00000557644 PRADC1Q9BSG0 188 aa10.62□□□□□ -0.71
NEDD1-213ENST00000557644 HBBP68871 147 aa10.61□□□□□ -0.71
NEDD1-213ENST00000557644 AMN1Q8IY45 258 aa10.61□□□□□ -0.71
NEDD1-213ENST00000557644 TMEM191AQ9H0A3 160 aa10.61□□□□□ -0.71
NEDD1-213ENST00000557644 KCNIP4Q6PIL6 250 aa10.61□□□□□ -0.71
NEDD1-213ENST00000557644 BTF3L4Q96K17 158 aa10.61□□□□□ -0.71
NEDD1-213ENST00000557644 ICOSQ9Y6W8 199 aa10.61□□□□□ -0.71
NEDD1-213ENST00000557644 RNF185Q96GF1 192 aa10.6□□□□□ -0.71
NEDD1-213ENST00000557644 GAGE12JA6NER3 117 aa10.6□□□□□ -0.71
NEDD1-213ENST00000557644 M0QY20 66 aa10.6□□□□□ -0.71
NEDD1-213ENST00000557644 TCTAP57738 103 aa10.6□□□□□ -0.71
NEDD1-213ENST00000557644 GAGE1Q13065 139 aa10.6□□□□□ -0.71
NEDD1-213ENST00000557644 GAGE4Q13068 117 aa10.6□□□□□ -0.71
NEDD1-213ENST00000557644 GAGE5Q13069 117 aa10.6□□□□□ -0.71
NEDD1-213ENST00000557644 GAGE13Q4V321 117 aa10.6□□□□□ -0.71
NEDD1-213ENST00000557644 ATP5L2Q7Z4Y8 100 aa10.6□□□□□ -0.71
NEDD1-213ENST00000557644 MRPL23Q16540 153 aaKnown RBP10.59□□□□□ -0.71
NEDD1-213ENST00000557644 GATD1Q8NB37 220 aa10.59□□□□□ -0.71
NEDD1-213ENST00000557644 A0A1B0GW15 77 aa10.59□□□□□ -0.71
NEDD1-213ENST00000557644 GAS8-AS1O95177 125 aa10.59□□□□□ -0.71
NEDD1-213ENST00000557644 RAB4AP20338 218 aa10.59□□□□□ -0.71
NEDD1-213ENST00000557644 S100PP25815 95 aa10.59□□□□□ -0.71
NEDD1-213ENST00000557644 SRIP30626 198 aa10.58□□□□□ -0.72
NEDD1-213ENST00000557644 NEXN-AS1Q8NBZ9 246 aa10.58□□□□□ -0.72
NEDD1-213ENST00000557644 ZNRF2Q8NHG8 242 aa10.58□□□□□ -0.72
NEDD1-213ENST00000557644 FAM104BQ5XKR9 115 aa10.57□□□□□ -0.72
NEDD1-213ENST00000557644 KMT2CQ8NEZ4 4911 aaKnown RBP10.57□□□□□ -0.72
NEDD1-213ENST00000557644 TRBV10-1A0A0K0K1A3 114 aa10.57□□□□□ -0.72
NEDD1-213ENST00000557644 LINC00694P0DN24 101 aa10.57□□□□□ -0.72
NEDD1-213ENST00000557644 ESRGQ1W209 222 aa10.57□□□□□ -0.72
NEDD1-213ENST00000557644 NEGR1Q7Z3B1 354 aa10.57□□□□□ -0.72
NEDD1-213ENST00000557644 SMKR1H3BMG3 65 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms