RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 NCBP2P52298 156 aaKnown RBP eCLIP1.01□□□□□ -2.25
HIF1A-212ENST00000557538 UBE2G1P62253 170 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 SSBP1Q04837 148 aaKnown RBP1.01□□□□□ -2.25
HIF1A-212ENST00000557538 EIF4EBP1Q13541 118 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-212ENST00000557538 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-212ENST00000557538 GDF5OSQ5U4N7 250 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 C12orf73Q69YU5 71 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 TMEM136Q6ZRR5 245 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 B9D2Q9BPU9 175 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 EIF5A2Q9GZV4 153 aaKnown RBP1.01□□□□□ -2.25
HIF1A-212ENST00000557538 C22orf24Q9Y442 160 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 ALMS1Q8TCU4 4167 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 DOCK8Q8NF50 2099 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 IGHV3OR15-7A0A075B7D8 119 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 IGKV6D-21A0A0A0MT36 114 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 TRAV1-2A0A0B4J238 106 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 IGHV5-10-1A0A0J9YXX1 117 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 LOC389332A0A1B0GUA5 103 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 LINC01546A6NGU7 62 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 ZNF736B4DX44 427 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-212ENST00000557538 E7EUB6 86 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 GNGT2O14610 69 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 CSN1S1P47710 185 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 FAM104BQ5XKR9 115 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 ZCCHC23Q6ZST2 131 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 KRTAP5-5Q701N2 237 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-212ENST00000557538 ATP5L2Q7Z4Y8 100 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 ITLN2Q8WWU7 325 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-212ENST00000557538 FAM3DQ96BQ1 224 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 BPESC1Q9GZL8 116 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 CST11Q9H112 138 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 LINC00574Q9H8X3 128 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 TRAPPC1Q9Y5R8 145 aa1.01□□□□□ -2.25
HIF1A-212ENST00000557538 TNRC6BQ9UPQ9 1833 aaKnown RBP1□□□□□ -2.25
HIF1A-212ENST00000557538 TRBV20OR9-2A0A075B6H5 130 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 C16orf90A8MZG2 172 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 IGLV1-51P01701 117 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 ATP5EP56381 51 aaPredicted RBP1□□□□□ -2.25
HIF1A-212ENST00000557538 KRTDAPP60985 99 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 SYCNQ0VAF6 134 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 ZNF678Q5SXM1 525 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 ATP11AUNQ6ZP68 121 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 VMO1Q7Z5L0 202 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 KRTAP4-3Q9BYR4 195 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 MRPL35Q9NZE8 188 aaKnown RBP1□□□□□ -2.25
HIF1A-212ENST00000557538 ABRACLQ9P1F3 81 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 TNRC6CQ9HCJ0 1690 aaKnown RBP1□□□□□ -2.25
HIF1A-212ENST00000557538 TANC2Q9HCD6 1990 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 MED12LQ86YW9 2145 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 PIKFYVEQ9Y2I7 2098 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 IGLV4-60A0A075B6I1 120 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 IGLV3-32A0A0A0MS00 114 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 TRAV13-2A0A0B4J235 113 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 IGKV6-21A0A0C4DH24 114 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 FAM24AA6NFZ4 105 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 K7ERJ3 54 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 HLA-DQA1P01909 254 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 NPPCP23582 126 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 ZNF791Q3KP31 576 aaPredicted RBP1□□□□□ -2.25
HIF1A-212ENST00000557538 ABCA11PQ4W5N1 156 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 LYRM7Q5U5X0 104 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 FAM223AQ8IWN6 122 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 SPANXA2-OT1Q8N9U9 137 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 Q8NDZ9 215 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 ZNRD1Q9P1U0 126 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 KLK12Q9UKR0 248 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 PCDH15Q96QU1 1955 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 LRRK1Q38SD2 2015 aa1□□□□□ -2.25
HIF1A-212ENST00000557538 TRAV2A0A0B4J234 112 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 IGHV1OR15-9A0A0B4J2B8 117 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 RTL8CO15255 209 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 TIMM17BO60830 172 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 ACYP1P07311 99 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 DYNLT3P51808 116 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 SYNJ2BPP57105 145 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 SUPT4H1P63272 117 aaKnown RBP0.99□□□□□ -2.25
HIF1A-212ENST00000557538 RHOHQ15669 191 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 TMEM170BQ5T4T1 132 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 NOXRED1Q6NXP6 359 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 LINC00643Q86TS7 51 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 ZNF563Q8TA94 476 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 AP1S3Q96PC3 154 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 SLC50A1Q9BRV3 221 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 TMEM14AQ9Y6G1 99 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 NACAE9PAV3 2078 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 B4DSR2 109 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 PPYP01298 95 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 P0C880 135 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 CD28P10747 220 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 UBE2AP49459 152 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 Q5VV11 94 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 Q6ZR03 302 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 SMIM5Q71RC9 77 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 CLECL1Q8IZS7 167 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 FAM213BQ8TBF2 198 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 ZNF714Q96N38 554 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 TIMM17AQ99595 171 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 SND1-IT1Q9HBX3 110 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 PLAC8Q9NZF1 115 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 HILPDAQ9Y5L2 63 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms